prot_H-elongata_contig46980.11797.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 2.390e-23 Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LAQSG+LDD AFVRFLEYLQYF +P+Y+KFITYPHSLAMLDLLIN+PPFRK
Sbjct: 27 LAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 1.020e-22 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LAQ G+LDD AF+RFLEYLQYF +P+Y+KFITYPHSLAMLDLLIN+PPFRK
Sbjct: 27 LAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: L1J6U1_GUITC (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6U1_GUITC) HSP 1 Score: 63.5 bits (153), Expect = 7.450e-12 Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLL 43
LA G+L DP F+R+L+YLQY+ QPQYSKF+ YPH L LDLL
Sbjct: 27 LANQGYLRDPKFIRYLDYLQYWKQPQYSKFLVYPHCLRFLDLL 69
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A7S0IJ64_MICPS (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IJ64_MICPS) HSP 1 Score: 62.4 bits (150), Expect = 5.060e-11 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRKA 52
LA +G +DDPAF+ +LEYL+Y+ QPQY+KF+ YPH+ L+ L P FRKA
Sbjct: 41 LASTGAMDDPAFIAYLEYLRYWEQPQYAKFVHYPHAFYFLEQL-RRPEFRKA 91
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A068RXX7_9FUNG (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RXX7_9FUNG) HSP 1 Score: 62.4 bits (150), Expect = 6.100e-11 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LAQ + D AF+R+LEYLQY+ +P+Y++F+ YPH+L LDLL HP FR+
Sbjct: 21 LAQQQYFKDDAFIRYLEYLQYWKKPEYARFVVYPHALYFLDLL-QHPKFRE 70
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.170e-10 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LA SG L D +F+ FLEYL+Y+++P+Y++FITYPH L LDLL + FR+
Sbjct: 53 LATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRR 103
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A068RZM8_9FUNG (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RZM8_9FUNG) HSP 1 Score: 62.4 bits (150), Expect = 1.280e-10 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LAQ + D AF+R+LEYLQY+ +P+Y++F+ YPH+L LDLL HP FR+
Sbjct: 62 LAQQQYFKDDAFIRYLEYLQYWKKPEYARFVVYPHALYFLDLL-QHPKFRE 111
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A1X2HHW3_SYNRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HHW3_SYNRA) HSP 1 Score: 61.2 bits (147), Expect = 1.620e-10 Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFRK 51
LAQ + D +F+R+LEYLQY+ QP+Y+KFI YPH+L LDLL H FR+
Sbjct: 34 LAQQQYFKDESFIRYLEYLQYWKQPEYAKFIVYPHALYFLDLL-QHEQFRE 83
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: S2JPN7_MUCC1 (Mediator of RNA polymerase II transcription subunit 31 n=5 Tax=Mucoraceae TaxID=34489 RepID=S2JPN7_MUCC1) HSP 1 Score: 59.7 bits (143), Expect = 4.720e-10 Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLLINHPPFR 50
LAQ + D AF+ +LEYLQY+ QP+Y+KF+ YPH+L LDLL H FR
Sbjct: 30 LAQQQYFKDEAFINYLEYLQYWKQPEYAKFVVYPHALYFLDLL-QHAQFR 78
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Match: A0A4P9WVG9_9FUNG (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WVG9_9FUNG) HSP 1 Score: 58.2 bits (139), Expect = 8.190e-10 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0
Query: 1 LAQSGFLDDPAFVRFLEYLQYFTQPQYSKFITYPHSLAMLDLL 43
LAQ+G+ DD F+ +L YLQY+ QPQY+++ITYP+ L +LDLL
Sbjct: 21 LAQNGYFDDAEFLNYLRYLQYWCQPQYARYITYPYCLEVLDLL 63 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46980.11797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig46980.11797.1 ID=prot_H-elongata_contig46980.11797.1|Name=mRNA_H-elongata_contig46980.11797.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bpback to top |