prot_H-elongata_contig46943.11791.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46943.11791.1
Unique Nameprot_H-elongata_contig46943.11791.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: D7FS69_ECTSI (Vps16_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS69_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 3.250e-71
Identity = 120/181 (66.30%), Postives = 139/181 (76.80%), Query Frame = 0
Query:    1 MSAADSISPTLRICSCAAGAISETRLDQVAQAPGAAAELGRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRKADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEEKI 181
            MSA DSI PTLR+C+CA G ISET LD+  QAPG A+E GRL+TM WTDGEMLVMVR+RGGVEVRDIMG LSKT+EL+D++SRRSS PDRV ACEVWGDGVVAL+ SG V AV  IH++EPR    A            GLG     LTAMA+LEPQFTASGALEVVLAT++GNV+   ++
Sbjct:   58 MSAKDSIVPTLRVCNCAGGTISETILDKAVQAPGTASERGRLLTMGWTDGEMLVMVRERGGVEVRDIMGELSKTLELVDDSSRRSSEPDRVAACEVWGDGVVALMGSGKVKAVSGIHSSEPRHFSMAA-----------GLGANAAPLTAMAVLEPQFTASGALEVVLATEDGNVLGATRV 227          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A6H5KVY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY1_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.910e-66
Identity = 121/180 (67.22%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    1 MSAADSISPTLRICSCAAGAISETRLDQVAQAPGAAAELGRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRKADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEEK 180
            MSA DSI PTLR+C+CA G ISETRLD+  QAPG A+E GRL+TM WTDGEMLVMVR+RGGVEVRDIMG LSKT+EL+D++SRRSS PDRV ACEVWGDGVVAL+ SG V AV  IH++EPR    A            GLG     LTAMA+LEPQFTASGALEVVLAT++GNV++ ++
Sbjct:   11 MSAKDSIVPTLRVCNCAGGTISETRLDKAVQAPGTASERGRLLTMGWTDGEMLVMVRERGGVEVRDIMGELSKTLELVDDSSRRSSEPDRVAACEVWGDGVVALMGSGKVKAVSGIHSSEPRHFSMAA-----------GLGANAAPLTAMAVLEPQFTASGALEVVLATEDGNVLAVDE 179          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A7S0LYY9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYY9_9CRYP)

HSP 1 Score: 69.3 bits (168), Expect = 1.340e-10
Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = 0
Query:   40 GRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRKADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLA 169
            GRL+ M W+D E L+ V D G V++  + G L +T  +  E        +RV+ C +WG GVV L    C+  V ++     RK        +                T+MA++EPQFT S ALEV++A
Sbjct:   96 GRLIEMGWSDDETLICVLDDGTVQIYSVQGRLLQTFSMGPEFRE-----ERVLHCCIWGGGVVCLSRGFCLAYVDNLEEPTVRKMPKLTDLPS--------------NPTSMAIIEPQFTQSKALEVLIA 206          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: F0YMC9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC9_AURAN)

HSP 1 Score: 64.3 bits (155), Expect = 8.390e-9
Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 0
Query:   41 RLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPR--KADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVI 176
            +LV M WT+GE+LV+V   G V + D++G   +T  L+   S    + D +    +WG G+VAL  +  +     +  T P   +    LS R P               T+M +L+P FT+SG +EV+L T +  V+
Sbjct:    6 QLVGMGWTEGELLVIVLRDGTVLLYDVLGRFVQTFLLLLPAS---PSEDNITEICLWGSGIVALTGTMALQVCDDVTVTSPSVYRMSTGLSPRRPA--------------TSMVVLQPCFTSSGLVEVILGTSDSTVL 126          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A5K0XR01_9MAGN (Vps16_N domain-containing protein (Fragment) n=14 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0XR01_9MAGN)

HSP 1 Score: 60.5 bits (145), Expect = 9.690e-8
Identity = 50/147 (34.01%), Postives = 67/147 (45.58%), Query Frame = 0
Query:   40 GRLVTMAWTDGEMLVMVRDRGGVEVRDIMGV-----LSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEP-RKADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEEK 180
            GRLV M WTD E LV V   G V   DI        LS  I+  DE          V+ C  WG+G+  L  +  V  +  + +  P R  +A L    P           GD     A++EPQ+T SG +EV+LA  +G V+ EE+
Sbjct:   89 GRLVGMGWTDEESLVCVVQDGSVYRYDIHAHPIEPHLSLGIDAADEN---------VVECIFWGNGIACLTDAARVFCIPDLKSPRPCRLCEAGL---VP-----------GDMPLCAAVIEPQYTMSGNVEVLLAVGDGVVVVEEE 212          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A0K9PL38_ZOSMR (Protein VACUOLELESS1 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PL38_ZOSMR)

HSP 1 Score: 61.2 bits (147), Expect = 1.040e-7
Identity = 42/140 (30.00%), Postives = 64/140 (45.71%), Query Frame = 0
Query:   40 GRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRKADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEE 179
            GRLV MAWTD  +LV V   G V   DI        E+  E   +      ++ C  WG+G+V +     V  V     TEP+     + +  P +          D    +A++EP++T SG +EV+L   +G ++ EE
Sbjct:   94 GRLVGMAWTDDHVLVCVVQNGKVYRYDIHAKPLPEFEIGTECFEQG-----ILECAFWGNGLVVITEGNLVFCVPDFRETEPK----VVRFADPEID---------DPPLCVAVIEPKYTMSGNVEVLLGAGDGVLVVEE 215          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A2D4C1F8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1F8_PYTIN)

HSP 1 Score: 59.7 bits (143), Expect = 3.550e-7
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   38 ELGRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRKA---DAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEEK 180
            ++  LV +AWTD   LV V + G      + G   +   L+  TS+     D++++CE WG G+VAL     +  V  +    P+ +   D  LS   P               T MA+LEP+F  S   EV+L T + ++++  K
Sbjct:   88 DMAPLVHLAWTDELRLVAVLENGQCHSFTLTGDDERPFPLLPPTSK-----DKIVSCEAWGSGLVALTEKMALIQVLDLDAVRPKVSLLPDCGLSDANPP--------------TCMAVLEPRFLKSIYPEVLLGTSDRSLVTVSK 214          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A1Y1VCK6_9FUNG (Probable vacuolar protein sorting-associated protein 16 homolog n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VCK6_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 6.420e-7
Identity = 41/134 (30.60%), Postives = 67/134 (50.00%), Query Frame = 0
Query:   40 GRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRK-ADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKN 172
            G+++ M WTD E  V V D G V + DI G  S+       +  R +  + V+ C +WG G+V + S+  + AV ++    P+  ADA L+                ++  +  +L+PQFT S ++EV+LA  N
Sbjct:   89 GKIIAMQWTDTENFVTVLDDGTVCIFDIHGEFSQF------SLGREAKDNGVIDCIIWGSGLVVMTSNYRLIAVNNLDEPRPKLLADAKLT----------------EKPHSWVVLQPQFTLSRSIEVLLAVGN 200          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: UPI0009E426D0 (LOW QUALITY PROTEIN: protein VACUOLELESS1-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E426D0)

HSP 1 Score: 58.9 bits (141), Expect = 6.480e-7
Identity = 43/141 (30.50%), Postives = 65/141 (46.10%), Query Frame = 0
Query:   40 GRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRK-ADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLATKNGNVISEE 179
            GRLV MAWTD  +LV V   G V   D+  VL+ +   + +     S    V+ C  WG+G++ L     +  V    N +P K AD  L                 D    +A++EPQ+T  G +EV+L  ++  ++ EE
Sbjct:   86 GRLVGMAWTDEHVLVCVVQDGTVYSYDVHAVLAASQFSMGKECFEQS----VVECVFWGNGMICLTEGNQIFCVSDFRNPQPCKLADPVLE----------------DYPLCVAVIEPQYTMHGNVEVLLGVEDHVLVVEE 206          
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Match: A0A7S0RJQ0_9CHLO (Protein VACUOLELESS1 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJQ0_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 8.780e-7
Identity = 43/136 (31.62%), Postives = 63/136 (46.32%), Query Frame = 0
Query:   38 ELGRLVTMAWTDGEMLVMVRDRGGVEVRDIMGVLSKT-IELIDETSRRSSTPDRVMACEVWGDGVVALLSSGCVTAVFSIHNTEPRK---ADAALSYRTPRMGGWRGLGRGGDRLTAMALLEPQFTASGALEVVLA 169
            E  RL    WTD E+L+ V +RG V    + G L +    L  E +        +  C +WG G+V L +S  + AV ++   EPR    +D  + +  P +               M ++EPQFT SG LEV+LA
Sbjct:   87 EADRLFAFGWTDDEVLLCVDERGQVLPYSVFGELQQNQFSLGSEVAAVG-----IKECHIWGSGLVVLTNSNLLYAVTNLR--EPRVQCLSDPLIEHDNPPL--------------CMTVIEPQFTMSGLLEVLLA 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46943.11791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS69_ECTSI3.250e-7166.30Vps16_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVY1_9PHAE1.910e-6667.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0LYY9_9CRYP1.340e-1033.08Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
F0YMC9_AURAN8.390e-931.16Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A5K0XR01_9MAGN9.690e-834.01Vps16_N domain-containing protein (Fragment) n=14 ... [more]
A0A0K9PL38_ZOSMR1.040e-730.00Protein VACUOLELESS1 n=1 Tax=Zostera marina TaxID=... [more]
A0A2D4C1F8_PYTIN3.550e-728.77Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1Y1VCK6_9FUNG6.420e-730.60Probable vacuolar protein sorting-associated prote... [more]
UPI0009E426D06.480e-730.50LOW QUALITY PROTEIN: protein VACUOLELESS1-like n=1... [more]
A0A7S0RJQ0_9CHLO8.780e-731.62Protein VACUOLELESS1 n=1 Tax=Pyramimonas obovata T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016534Vacuolar protein sorting-associated protein 16PANTHERPTHR12811VACUOLAR PROTEIN SORTING VPS16coord: 6..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46943contigH-elongata_contig46943:2412..4077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46943.11791.1mRNA_H-elongata_contig46943.11791.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46943 2409..4077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46943.11791.1 ID=prot_H-elongata_contig46943.11791.1|Name=mRNA_H-elongata_contig46943.11791.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MSAADSISPTLRICSCAAGAISETRLDQVAQAPGAAAELGRLVTMAWTDG
EMLVMVRDRGGVEVRDIMGVLSKTIELIDETSRRSSTPDRVMACEVWGDG
VVALLSSGCVTAVFSIHNTEPRKADAALSYRTPRMGGWRGLGRGGDRLTA
MALLEPQFTASGALEVVLATKNGNVISEEKI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016534VPS16