prot_H-elongata_contig46871.11785.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46871.11785.1
Unique Nameprot_H-elongata_contig46871.11785.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.890e-63
Identity = 103/118 (87.29%), Postives = 108/118 (91.53%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDSDPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            YQT+ERVVNGTFSMQKEW+LSR M WDE +AQ TAQEMYRRMF  KFLPPGRGLWAMGSKLTTERR YAALNNCAFVST+D+ SDPTAPFCFLMDASMLGVGVGFDTKGAG I VVAP
Sbjct:   86 YQTIERVVNGTFSMQKEWMLSRGMRWDEQEAQSTAQEMYRRMFAFKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTRDLASDPTAPFCFLMDASMLGVGVGFDTKGAGTIDVVAP 203          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA)

HSP 1 Score: 193 bits (491), Expect = 8.770e-56
Identity = 91/118 (77.12%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDSDPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            YQTV+RVVNGTFSMQKEW L+  +PW ED AQ  AQ+MY R+F MKFLPPGRGLWAMGSKLTTERR +AALNNCAFVST ++  DPT PFCFLMDASMLGVGVGFDTKGAG + V  P
Sbjct:   67 YQTVQRVVNGTFSMQKEWTLTGGLPWSEDAAQAEAQDMYTRIFNMKFLPPGRGLWAMGSKLTTERRLFAALNNCAFVSTANMAEDPTGPFCFLMDASMLGVGVGFDTKGAGAVGVHKP 184          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.800e-53
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDSDPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            +QTV+RVVNGTFSMQKEW+++    WDE  AQ  AQEMY R+F MKFLPPGRGLWAMG+ LTT+RR YAALNNCAFVST D+  DPTAPFCFLMDA MLGVGVGFDTKGA  + VVAP
Sbjct:   81 FQTVQRVVNGTFSMQKEWLITEHRCWDEAAAQRDAQEMYERIFNMKFLPPGRGLWAMGTALTTQRRLYAALNNCAFVSTADMQDDPTAPFCFLMDACMLGVGVGFDTKGARTVDVVAP 198          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.060e-52
Identity = 87/118 (73.73%), Postives = 103/118 (87.29%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDSDPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            ++TV RVVNGTFSMQKEW+L + + WDE++AQ  AQEMYRR+FEMKFLPPGRGLWAMG+ LT +RR YAALNNC FVSTQD+ +DP+APF FLMDASMLGVGVGFDT GAG+++V  P
Sbjct:  253 FETVGRVVNGTFSMQKEWLLRQSLEWDEERAQGLAQEMYRRIFEMKFLPPGRGLWAMGTTLTEDRRLYAALNNCGFVSTQDMANDPSAPFAFLMDASMLGVGVGFDTLGAGRVTVWGP 370          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A3L6V3B6_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V3B6_9STRA)

HSP 1 Score: 174 bits (442), Expect = 4.530e-51
Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            Y+TVERVVNGT++MQK W+  R + W+  +A  +A+EMYRR+F MKFLPPGRGLWAMGS +T ER+ YAALNNCAFVST+DVD    P  PFCFLMDA+MLGVGVGFDTKGAGKI V  P
Sbjct:   99 YETVERVVNGTYNMQKHWLEHRGLGWNGREAHRSAREMYRRIFAMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFCFLMDAAMLGVGVGFDTKGAGKIMVKGP 218          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A1V9YQF5_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQF5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.280e-49
Identity = 82/120 (68.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            ++TVERVVNGT++MQK W+    + W+  +A  +AQEMYRR+FEMKFLPPGRGLWAMGS +T ER+ YAALNNCAFVST+D+ S   P+ PFCFLMDA+MLGVGVGFDTKGAGK++V  P
Sbjct:   48 FETVERVVNGTYNMQKSWIEQSGLGWNSQEADKSAQEMYRRIFEMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDIASRCSPSEPFCFLMDAAMLGVGVGFDTKGAGKLAVRGP 167          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A485L5Q2_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L5Q2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 4.050e-49
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            Y+TVERVVNGT++MQK W+  R + W+  +A  +A+EMYRR+F+MKFLPPGRGLWAMGS +T ER+ YAALNNCAFVST+DVD    P  PFCFLMDA+MLGVGVGFDTKGAGKI V  P
Sbjct:  139 YETVERVVNGTYNMQKHWLEHRGLGWNGHEAHRSAREMYRRIFDMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFCFLMDAAMLGVGVGFDTKGAGKIMVRGP 258          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: W4GZS7_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZS7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.300e-48
Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            Y+TVERVVNGT++MQK W+  R + W+  +A  +A+EMYRR+F MKFLPPGRGLWAMGS +T ER+ YAALNNCAFVST+DVD    P  PFCFLMDA+MLGVGVGFDTKGAGKI V  P
Sbjct:  167 YETVERVVNGTYNMQKHWLEHRGLGWNGREAHRSAREMYRRIFAMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFCFLMDAAMLGVGVGFDTKGAGKIMVKGP 286          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A024U326_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U326_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.550e-48
Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            Y+TVERVVNGT++MQK W+  R + W+  +A  +A+EM+RR+F MKFLPPGRGLWAMGS +T ER+ YAALNNCAFVST+DVD    P  PFCFLMDA+MLGVGVGFDTKGAGKI V  P
Sbjct:  145 YETVERVVNGTYNMQKHWLEHRGLGWNGQEAHRSAREMFRRIFNMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFCFLMDAAMLGVGVGFDTKGAGKIMVKGP 264          
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Match: A0A2D4BDT2_PYTIN (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDT2_PYTIN)

HSP 1 Score: 171 bits (432), Expect = 9.310e-48
Identity = 81/120 (67.50%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPPGRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDS--DPTAPFCFLMDASMLGVGVGFDTKGAGKISVVAP 118
            ++TVERVVNGTF+MQK W+   ++ WDE   Q TAQ+MY+R+FEMKFLPPGRGLWAMGS +T ER  +AALNNCAFVST+D+ +   P  PFCFLMDA+MLGVGVGFDTKGA K+ V  P
Sbjct:   63 HETVERVVNGTFTMQKHWLAQLELEWDEPAMQRTAQQMYQRIFEMKFLPPGRGLWAMGSAITEERGLFAALNNCAFVSTEDLGNLPSPAEPFCFLMDAAMLGVGVGFDTKGANKLIVQGP 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46871.11785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK6_ECTSI1.890e-6387.29Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A835YMD1_9STRA8.770e-5677.12Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A835ZHW0_9STRA1.800e-5375.42Ribonucleoside-triphosphate reductase (thioredoxin... [more]
W7T512_9STRA1.060e-5273.73Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A3L6V3B6_9STRA4.530e-5170.00Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A1V9YQF5_9STRA1.280e-4968.33Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A485L5Q2_9STRA4.050e-4970.00Ribonucleoside-triphosphate reductase (thioredoxin... [more]
W4GZS7_9STRA1.300e-4870.00Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A024U326_9STRA1.550e-4869.17Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A2D4BDT2_PYTIN9.310e-4867.50Ribonucleoside-triphosphate reductase (thioredoxin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 1..114
e-value: 4.3E-25
score: 90.2
NoneNo IPR availablePANTHERPTHR43371FAMILY NOT NAMEDcoord: 2..107
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 2..105
IPR040763Ribonucleotide reductase, alpha helical domainPFAMPF17975RNR_Alphacoord: 2..59
e-value: 1.0E-21
score: 77.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46871contigH-elongata_contig46871:366..1672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46871.11785.1mRNA_H-elongata_contig46871.11785.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46871 366..1672 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46871.11785.1 ID=prot_H-elongata_contig46871.11785.1|Name=mRNA_H-elongata_contig46871.11785.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
YQTVERVVNGTFSMQKEWVLSRDMPWDEDQAQVTAQEMYRRMFEMKFLPP
GRGLWAMGSKLTTERRSYAALNNCAFVSTQDVDSDPTAPFCFLMDASMLG
VGVGFDTKGAGKISVVAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040763RNR_alpha_hel