prot_H-elongata_contig46790.11780.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46790.11780.1
Unique Nameprot_H-elongata_contig46790.11780.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.090e-9
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            QDTDEIGFR G  I VLEK  +WWKG+V GKTGL
Sbjct:  170 QDTDEIGFRVGDMIHVLEKKAEWWKGTVGGKTGL 203          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: A0A8B7DDB1_HYDVU (intersectin-1-like n=4 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DDB1_HYDVU)

HSP 1 Score: 48.9 bits (115), Expect = 1.310e-5
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q+ DE+ F  G+ I VL K G+WWKG +DG+TG+
Sbjct: 1454 QNEDELTFCKGSMINVLSKDGEWWKGELDGQTGV 1487          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: T2MDA5_HYDVU (Intersectin-1 (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MDA5_HYDVU)

HSP 1 Score: 48.9 bits (115), Expect = 1.310e-5
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q+ DE+ F  G+ I VL K G+WWKG +DG+TG+
Sbjct:  500 QNEDELTFCKGSMINVLSKDGEWWKGELDGQTGV 533          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: A0A5Q0JE06_CLALS (Uncharacterized protein n=1 Tax=Clavispora lusitaniae TaxID=36911 RepID=A0A5Q0JE06_CLALS)

HSP 1 Score: 47.8 bits (112), Expect = 3.400e-5
Identity = 14/34 (41.18%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q+ +++ F+ G  ++V+EK G+WWKG ++GK+G+
Sbjct:  353 QEVNDLSFKKGDVVKVIEKKGEWWKGELNGKSGM 386          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: A0A6P7NBF3_BETSP (GRB2-related adapter protein 2-like n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7NBF3_BETSP)

HSP 1 Score: 47.4 bits (111), Expect = 4.120e-5
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPG-DWWKGSVDGKTGL 34
            ++ DE+ FRAG  I+VL++ G DWWKG + G+TGL
Sbjct:  195 EEADELEFRAGDVIQVLDRSGPDWWKGQLRGRTGL 229          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: A0A2B4RI15_STYPI (Intersectin-1 n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RI15_STYPI)

HSP 1 Score: 47.0 bits (110), Expect = 6.290e-5
Identity = 16/34 (47.06%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q++DE+ F  G+ I V+ K G+WWKG ++G+TG+
Sbjct: 1233 QNSDELTFYKGSVINVVSKDGEWWKGEMNGQTGM 1266          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: UPI0009E4B40D (intersectin-1-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4B40D)

HSP 1 Score: 46.6 bits (109), Expect = 8.600e-5
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q+ DE+ F  G+ I V+ K G+WWKG ++G+TG+
Sbjct: 1244 QNADELTFYKGSVINVVSKDGEWWKGEMNGQTGM 1277          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: O77202_ACACA (Myosin-IA n=1 Tax=Acanthamoeba castellanii TaxID=5755 RepID=O77202_ACACA)

HSP 1 Score: 46.6 bits (109), Expect = 8.600e-5
Identity = 16/34 (47.06%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q+ DE+  R G  I V++K G+WW+G+++GKTG+
Sbjct: 1173 QEADELTLREGDVIDVIQKSGEWWEGTLNGKTGV 1206          
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Match: Q6BWU3_DEBHA (DEHA2B08514p n=1 Tax=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) TaxID=284592 RepID=Q6BWU3_DEBHA)

HSP 1 Score: 46.6 bits (109), Expect = 8.700e-5
Identity = 15/34 (44.12%), Postives = 24/34 (70.59%), Query Frame = 0
Query:    1 QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL 34
            Q   ++ F+AGA I++ +K G WW+GS+D + GL
Sbjct:  384 QQEGDLSFKAGAIIKIFDKSGGWWRGSIDDEVGL 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46790.11780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LRI4_ECTSI1.090e-973.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8B7DDB1_HYDVU1.310e-552.94intersectin-1-like n=4 Tax=Hydra vulgaris TaxID=60... [more]
T2MDA5_HYDVU1.310e-552.94Intersectin-1 (Fragment) n=1 Tax=Hydra vulgaris Ta... [more]
A0A5Q0JE06_CLALS3.400e-541.18Uncharacterized protein n=1 Tax=Clavispora lusitan... [more]
A0A6P7NBF3_BETSP4.120e-554.29GRB2-related adapter protein 2-like n=1 Tax=Betta ... [more]
A0A2B4RI15_STYPI6.290e-547.06Intersectin-1 n=4 Tax=Pocilloporidae TaxID=46729 R... [more]
UPI0009E4B40D8.600e-547.06intersectin-1-like isoform X1 n=2 Tax=Orbicella fa... [more]
O77202_ACACA8.600e-547.06Myosin-IA n=1 Tax=Acanthamoeba castellanii TaxID=5... [more]
Q6BWU3_DEBHA8.700e-544.12DEHA2B08514p n=1 Tax=Debaryomyces hansenii (strain... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.40coord: 1..34
e-value: 2.4E-9
score: 38.5
IPR001452SH3 domainPFAMPF00018SH3_1coord: 1..34
e-value: 2.5E-8
score: 33.4
IPR001452SH3 domainPROSITEPS50002SH3coord: 1..34
score: 16.063
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46790contigH-elongata_contig46790:570..674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46790.11780.1mRNA_H-elongata_contig46790.11780.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46790 570..674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46790.11780.1 ID=prot_H-elongata_contig46790.11780.1|Name=mRNA_H-elongata_contig46790.11780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
QDTDEIGFRAGAFIRVLEKPGDWWKGSVDGKTGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036028SH3-like_dom_sf