prot_H-elongata_contig46677.11768.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46677.11768.1
Unique Nameprot_H-elongata_contig46677.11768.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.890e-58
Identity = 87/114 (76.32%), Postives = 101/114 (88.60%), Query Frame = 0
Query:    1 QDPYSDASAKYGPLKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLSEQF 114
            QDPYSDASAKYGPLKLP+L+ VDLSKMYGGAAQGKEP+YLDYNIKGR + ER PYNAGA+Y+ GI+ GGAAG++EG AKAPNRR RV+ NSIMNHAGK+G+ YGNT AVL+  +
Sbjct:   13 QDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYY 126          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.450e-30
Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 0
Query:    2 DPYSDASAKYGPLKLPQLEP--VDLSK---MYGGAAQGK-EPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            DPY+D  AK+G L+LP+L    +DL     MYG    G  EPDYLDYNIKGR   E+T YN G  YL GI+ GG  G+ EG   AP+ R R+  N+I+N AGKRG+  GNTLAVL+
Sbjct:   14 DPYTDPGAKFGRLELPKLNTSSIDLGSLAGMYGVQGGGAYEPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLA 129          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S2QVE9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.060e-20
Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   13 PLKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            P  LP L+ +DL ++ GG     EP+YLDY+IKGR W +RT  + G  YL+G   GG  G++ G++  PN R +V  N+++NH+G+ G+  GN +  ++
Sbjct:    8 PPTLPSLDGIDLRRVAGGITS--EPEYLDYDIKGRGWWDRTVSSTGWGYLIGTGVGGIYGVKTGMSSVPNSRFKVKVNALLNHSGRYGSRVGNAVGCVA 104          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A6S8GC44_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8GC44_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.670e-19
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 QDPYSDASAKYGP-LKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLSEQF 114
            QDP   +     P L L  ++P  L+ M     QG  P+YL Y+ KGR + E+T YN G MYL+GIV GG  G  EG+  +P+ + ++  N+++N  G+RG+  GN L  L+  +
Sbjct:   19 QDPEGYSYTAPNPFLGLNSIDPKALNPMI----QGNGPEYLQYDTKGRGYTEKTFYNCGTMYLLGIVGGGTYGFFEGLRSSPSNKFKIRLNTVLNKCGRRGSRAGNALGALALMY 129          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A6U5ID74_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5ID74_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.270e-18
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 0
Query:   29 GGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            G      EPDYLDYN+KGR   E+   N GA Y++    GGA G++ G+A  PN RMRV  NS++NH  K G+  GN + VLS
Sbjct:   37 GTIGYAPEPDYLDYNLKGRGVSEKMFANTGASYVIATFIGGAMGLRSGLAATPNSRMRVKLNSVLNHCSKIGSKSGNAVGVLS 119          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S2WJK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJK1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.950e-18
Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    1 QDPYSDASAKYGPLKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            ++P +++ A   P  +P L+   L  ++G      EPDYL+Y++KGRS+ E+  +N G  Y++G  +G   G   G+A AP+ + RV  N+++N AGK G+  GN L VL+
Sbjct:    2 REPMAESEA---PAPIPHLDAPALGGIFGRPGVD-EPDYLEYDLKGRSYFEKLFFNTGLSYMIGSASGSLYGATSGLANAPSSKFRVKVNALLNGAGKYGSRGGNALGVLA 108          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S2S630_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S630_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.340e-17
Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    1 QDPYSDASAKYGPLKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            ++P +++ A   P  +P L+   L  ++G      EPDYL+Y++KGRS+ E+  +N G  Y++G  +G   G   G+A AP+ + RV  N+++N AGK G+  GN L VL+
Sbjct:    2 REPMAESEA---PAPIPHLDAPALGGIFGRPGVD-EPDYLEYDLKGRSYFEKLFFNTGLSYMIGSASGSLYGATSGLANAPSSKFRVKVNALLNGAGKYGSRGGNALGVLA 108          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.250e-17
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   15 KLPQLEPVDLS---KMYGGAAQGK--EPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            +LP +  +D +    + GG + G   EP+YLDY IK R  LE      G  YL G++ GG  G+ EG+  +P+ R R++ NSIMN+AGKRG+  GN    ++
Sbjct:   12 ELPPIPGIDFTLKQPIGGGLSTGSRYEPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVA 113          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S1VVP8_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVP8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.300e-17
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   35 KEPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            ++PDYLDY+ KGR  +     NAG  YL+G  AGGA G++EG   +P++R RV  NSI+NH G+ G+ +GN+L V+S
Sbjct:   40 QQPDYLDYDQKGRGIVVTMFANAGMSYLLGTFAGGAYGLREGFIHSPSQRFRVKLNSILNHCGRHGSRWGNSLGVVS 116          
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Match: A0A7S4IP09_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IP09_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.870e-17
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    2 DPYSDASAKYGPLKLPQLEPVDLSKM-----YGGAAQGK-EPDYLDYNIKGRSWLERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRGASYGNTLAVLS 111
            D  SD+S+  G L       + L+ +        AA G+ +PDYLDY+ KGR  +     NAG  YL+GI+ GG  G++EG+A  P+ R++V  NS++NH G+ G+  GN L VLS
Sbjct:   88 DVTSDSSSSAGALPNFDASAIKLTTIAPALGVPNAAYGEPQPDYLDYDQKGRGVVVTMFANAGMSYLLGILGGGLYGLKEGLAHTPSTRLKVKVNSVLNHCGRHGSRAGNVLGVLS 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46677.11768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G276_ECTSI1.890e-5876.32Mitochondrial import inner membrane translocase su... [more]
A0A835Z638_9STRA1.450e-3053.45Mitochondrial import inner membrane translocase su... [more]
A0A7S2QVE9_9STRA4.060e-2040.40Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A6S8GC44_9STRA6.670e-1938.26Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6U5ID74_9STRA2.270e-1848.19Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2WJK1_9STRA2.950e-1836.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2S630_9STRA1.340e-1736.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XNQ0_9STRA2.250e-1740.20Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1VVP8_9STRA3.300e-1749.35Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S4IP09_9STRA3.870e-1740.52Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15371:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-RELATEDcoord: 25..111
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 25..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..114
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46677contigH-elongata_contig46677:8..2042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46677.11768.1mRNA_H-elongata_contig46677.11768.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46677 8..2042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46677.11768.1 ID=prot_H-elongata_contig46677.11768.1|Name=mRNA_H-elongata_contig46677.11768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
QDPYSDASAKYGPLKLPQLEPVDLSKMYGGAAQGKEPDYLDYNIKGRSWL
ERTPYNAGAMYLVGIVAGGAAGMQEGIAKAPNRRMRVMTNSIMNHAGKRG
ASYGNTLAVLSEQF
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