prot_H-elongata_contig46676.11767.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46676.11767.1
Unique Nameprot_H-elongata_contig46676.11767.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length358
Homology
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 8.580e-116
Identity = 203/360 (56.39%), Postives = 246/360 (68.33%), Query Frame = 0
Query:    1 IGLARGIGGSLVPCDKGLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIGSMVRGALGLEGLSREDVRLIAVTYGFVVSVVQMLFVADFNPFAPVHKVLYSATGIEKPP-TMRHEEVAKAPEVTNAPANGGAINSVAAASGAEEENEAENRER--GRLYDINNGKIFQGLLDALKLVGMVGVVILALYSGQPPSKITSGEVLTVRGGGLASCTFLPAPLRAVAGGCEPIRAAVIETGSLVVYRGDDSKVPPLPPPQKWWARFFAAPAEVARDRKRWQEDVVFVSPSPKKRGFKAED-VQLQLSEDGILAIVAEGKQLWSSTLTSVGKRLPPFRVEARLDPVKGALEVFKGGQLQWSSSGK 356
            IGLARGIGGSLVP DKGL SI KDLPW VQLCF+VA FYH+VANDT+++G MVRGALGLE  +RED+RLIAVT+G VV+V+Q  +   FNPF P H+ LY+ TG+ K   T+       + +   A  NGG        +GAEE  + E +E   G LYD+   K  Q  L+ALK VG+  V +LALYS QPPS I  G V+   G GLASC FLP   + ++ GC P+RAAV ETGSLVVYRG +  VP LP          AA  +V  D      +V++ SP+PKK    AED VQL LSEDGIL+++A  K+LWSSTLT++GKRLP FRVEARLD VKGALEV+KGGQLQWSS+GK
Sbjct:   83 IGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTAITIEVPRSTPSTDADKAKDNGG--------NGAEEAKDKEKKEGEGGGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLP---KVLSNGCTPLRAAVTETGSLVVYRGKE--VPVLP----------AAKKKVEGDD---GPEVLWSSPAPKK--LAAEDEVQLDLSEDGILSVMAGDKKLWSSTLTTLGKRLPNFRVEARLDAVKGALEVYKGGQLQWSSAGK 414          
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.670e-74
Identity = 151/293 (51.54%), Postives = 184/293 (62.80%), Query Frame = 0
Query:    1 IGLARGIGGSLVPCDKGLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIGSMVRGALGLEGLSREDVRLIAVTYGFVVSVVQMLFVADFNPFAPVHKV----LYSATGIEKPP-TMRHEEVAKAPEVTNAPANGGAINSVAAASGAEEENEAENRE-RGR-LYDINNGKIFQGLLDALKLVGMVGVVILALYSGQPPSKITSGEVLTVRGGGLASCTFLPAPLRAVAGGCEPIRAAVIETGSLVVYRGDDSKVPPLPPPQKWWARFFAAPAEVARDRKRWQEDVVFVSPSPKK 286
            IGLARGIGGSLVP DKGL SI KDLPW VQLCF+VA FYHIVANDT+++G MVRGALGLE  +RED+RLIAVT+G VV+V+Q  +   FNPF P H+     LY+ TG+ K   T+       + +   A  NGG        +GAEE    E +E  G  LYD+   K  Q  L+ALK VG+  V +LALYS QPPS I  G V+   G GLASC FLP   + ++ GC P+RAAV ETGSLVVYRG +  VP LP          AA  +V  D      +V++ SP+PKK
Sbjct:  151 IGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTAITIEVPRSTPSTDADKAKDNGG--------NGAEETKGKEKKEGEGEGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAGGSGLASCAFLP---KVLSNGCTPLRAAVTETGSLVVYRGKE--VPVLP----------AAKKKVEGDD---GAEVLWSSPAPKK 417          
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 8.140e-11
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    1 IGLARGIGGSLVPCDKGLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIGSMVR--GALGLEGLSREDVRLIAVTYGFVVSVVQMLFVADFNPFAPVHKVLYSATGIEKP 108
            +G   G GG  +P DKGLK ++   PW +Q  F  ++F+++   D  V G  +R   AL L+G      R I   +  VV++ Q L    FNPF PVH V+Y+ TG+  P
Sbjct:  176 LGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNV-GPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNP 284          
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.000e-9
Identity = 88/362 (24.31%), Postives = 147/362 (40.61%), Query Frame = 0
Query:    1 IGLARGIGGSLVPCDKGLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIGSMVRGALGLEGLSREDVRLIAVTYGFVVSVVQMLFVADFNPFAPVHKVLYSATGIEKPPTMRHEEVAKAPEVTNAPANGGAINSVAAASGAEEENEAENRERGRLYDINNGKIFQGLLDALKLVGMVGVVILALYSGQPPSKITSGEVLTVRGGGLASCTFLPA--PLRAVAGGCEPIRAAVIETGSLVVYRGDDSKVPPLPPPQKWWARFFAAPAEVARDRKRWQEDVVFVSPSPKKRGFKAEDVQLQLSEDGILAI--VAEGKQLW--SSTLTSVGKRLPPFRVEARLDPV-KGALEVFKGGQLQWSSSG 355
            +G   G  G+ +P D+G+  +   +P  +Q      +FYH+ A+D  + G+ +RG   L     E+++ + V +   ++ + ++   D+NPF PVH +LY   GI   P     E  K+    +   + G   +V A+              GRL            L A K++    V +LA+ + Q   K+     L V GG L    ++ A  PL++  G C+     +   G L +YRG                   A+P +    R  WQ      S    + G  AE     L E G+L +   A G   +  SS+  + G++         L  + +GA  +F+G    W+S G
Sbjct:  155 VGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPYSPATL--ERLKSTRRASTAGDHGPKPAVKAS--------------GRL------------LGASKVL----VPLLAVLAYQLQGKLAPRTTLPV-GGRLNPGEYIAACGPLQSFTGHCKQHFLTLDAEGRLSLYRG-------------------ASPKDTGSQR-LWQSKATRRSGKLNEAGLFAE-----LKEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQEAGRLHLRVLERGAFGIFEGSTPLWTSDG 458          
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Match: A0A7S2SKA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.430e-6
Identity = 32/95 (33.68%), Postives = 48/95 (50.53%), Query Frame = 0
Query:   17 GLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIGSMVRGALGLEGLSREDV--RLIAV-TYGFVVSVVQMLFVADFNPFAPVHKVLYSATGIEKP 108
            G+  ++ ++ W +Q  F  A +YHI  ND  V    + G L + G   + +  R+  +   G V  + +  F A FNPFAPVH +LY  TG   P
Sbjct:  219 GVGLVQSEVSWLIQSSFYAAAYYHITVNDPIV--GPILGKLHISGAGSDPLVARMTCIFALGAVAVLQEAFFGAHFNPFAPVHHLLYKITGAHNP 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46676.11767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FML9_ECTSI8.580e-11656.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV5_9PHAE2.670e-7451.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2H0_ECTSI8.140e-1137.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CX56_9STRA2.000e-924.31Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2SKA8_9STRA4.430e-633.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46676contigH-elongata_contig46676:677..4180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46676.11767.1mRNA_H-elongata_contig46676.11767.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46676 677..4180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46676.11767.1 ID=prot_H-elongata_contig46676.11767.1|Name=mRNA_H-elongata_contig46676.11767.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp
IGLARGIGGSLVPCDKGLKSIRKDLPWKVQLCFTVAVFYHIVANDTFVIG
SMVRGALGLEGLSREDVRLIAVTYGFVVSVVQMLFVADFNPFAPVHKVLY
SATGIEKPPTMRHEEVAKAPEVTNAPANGGAINSVAAASGAEEENEAENR
ERGRLYDINNGKIFQGLLDALKLVGMVGVVILALYSGQPPSKITSGEVLT
VRGGGLASCTFLPAPLRAVAGGCEPIRAAVIETGSLVVYRGDDSKVPPLP
PPQKWWARFFAAPAEVARDRKRWQEDVVFVSPSPKKRGFKAEDVQLQLSE
DGILAIVAEGKQLWSSTLTSVGKRLPPFRVEARLDPVKGALEVFKGGQLQ
WSSSGKV*
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