prot_H-elongata_contig46667.11764.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig46667.11764.1
Unique Name	prot_H-elongata_contig46667.11764.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	195

Homology

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BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 5.110e-35
Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 0

Query:    3 LVVATWNVRTMSKTGTNGPGHAEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFK-HRAVTSFIVGYAPTETAATCHKPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDN 191
            L VATWNVRT++  G NG G A  +L  AA+ +   + +QETRR GRT   A  AG+ V C G   G     G+ GVG+AV+ES+ +         E I   L+ +R +   HR   +F+  YAPTE +    K  FW +L S +  +P+ + + ++MDANARTG R +GG   D RV+G YGRD LNDN
Sbjct:  113 LRVATWNVRTLAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTEPSTADSKRVFWGKLDSLVRRIPSKECVHVLMDANARTGDRLDGG---DGRVIGMYGRDELNDN 289

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BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 5.150e-35
Identity = 82/201 (40.80%), Postives = 118/201 (58.71%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NVRT++ +G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E IS RL+KVR+        +F+VGYAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:  174 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERL 370

[Close]

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 6.940e-35
Identity = 82/201 (40.80%), Postives = 118/201 (58.71%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NVRT++ +G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E IS RL+KVR+        +F+VGYAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:   85 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERL 281

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BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.190e-34
Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NVRT++ +G N  GH    ++   +   CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E I  RL+KVR+        +F+V YAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:  147 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDG--CCDAKIMGVYGRDIMNNNGERL 343

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BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.680e-34
Identity = 83/201 (41.29%), Postives = 117/201 (58.21%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NVRT++ +G N  GH    ++   A  +CD I +QETRR G+  I     GYV+  SG   G   K G+ GVG+A++E++  ++G      E IS RL+KVR+        +F+VGYAPTETA          K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:   89 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERL 285

[Close]

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.570e-34
Identity = 80/201 (39.80%), Postives = 116/201 (57.71%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NVRT++ +G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G+ GVG+ ++E++  ++G +    E I  RL+KVR+        +F+VGYAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:   80 DLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERL 276

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BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.080e-33
Identity = 81/200 (40.50%), Postives = 117/200 (58.50%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSR 194
            +L   T+NVRT++ +G N  GH    ++   +   CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E IS RL+KVR+   H      +VGYAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  R
Sbjct:  132 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGER 327

[Close]

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.850e-33
Identity = 80/190 (42.11%), Postives = 111/190 (58.42%), Query Frame = 0

Query:    3 LVVATWNVRTMSKTGTNGPGHAEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFK-HRAVTSFIVGYAPTETAATCHKPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDN 191
            L VATWNVRT++  G NG G A  +L  AA+ +   + +QETRR GRT   A  AG+ V C G   G     G+ GVG+AV+ES+ +         E I  RL+ +R++   HR   +F+   APTE +    K  FW +L S +  +P+ + + +++DANARTG R +GG   D RV+G YGRD LNDN
Sbjct:   58 LRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG---DGRVIGMYGRDELNDN 234

[Close]

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 4.940e-33
Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 0

Query:    2 ELVVATWNVRTMSKTGTNGPGH-AEDLLIFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            +L   T+NV T++ +G N  GH    ++   +   CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E IS RL+KVR+        +F+V YAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R +G    D +++G YGRD +N+N  RL
Sbjct:  656 DLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERL 852

[Close]

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.060e-32
Identity = 75/166 (45.18%), Postives = 101/166 (60.84%), Query Frame = 0

Query:   36 CDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEHISARLLKVRVIFKHRAVTSFIVGYAPTETAATCH------KPKFWKELRSTIAEVPASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL 195
            CD I +QETRR+G+ +I     GYV+  SG   G   K G+ GVG+A++E++  ++G +    E IS RL+KVR+        +F+VGYAPTET  T        K  FW  L + I EV + DHL+++MDANARTG R   GG  D +VLG YGRD +N+N  RL
Sbjct:   12 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERL 173

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot

BLAST of mRNA_H-elongata_contig46667.11764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KDS6_9PHAE	5.110e-35	42.63	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3Q1_9PHAE	5.150e-35	40.80	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JMB4_9PHAE	6.940e-35	40.80	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L660_9PHAE	1.190e-34	39.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQH5_9PHAE	1.680e-34	41.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KV75_9PHAE	3.570e-34	39.80	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K5A7_9PHAE	1.080e-33	40.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JBD7_9PHAE	1.850e-33	42.11	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K1H7_9PHAE	4.940e-33	39.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KBZ6_9PHAE	1.060e-32	45.18	Endo/exonuclease/phosphatase domain-containing pro...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 1..178 e-value: 3.0E-13 score: 52.1
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 5..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig46667	contig	H-elongata_contig46667:3736..4320 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig46667.11764.1	mRNA_H-elongata_contig46667.11764.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig46667 3736..4320 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig46667.11764.1 ID=prot_H-elongata_contig46667.11764.1|Name=mRNA_H-elongata_contig46667.11764.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
KELVVATWNVRTMSKTGTNGPGHAEDLLIFAAKYECDFIAIQETRRDGRT
TIQAPAAGYVVHCSGHCDGDGGKPGIIGVGLAVRESITRALGPDDIVPEH
ISARLLKVRVIFKHRAVTSFIVGYAPTETAATCHKPKFWKELRSTIAEVP
ASDHLILIMDANARTGGRGEGGGLGDVRVLGPYGRDTLNDNWSRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf