prot_H-elongata_contig46617.11761.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI) HSP 1 Score: 356 bits (914), Expect = 2.170e-121 Identity = 172/219 (78.54%), Postives = 191/219 (87.21%), Query Frame = 0
Query: 1 VEWHSGNKRQRQNFWTEVVHNACNGLLENDTTKGEEEFRGHLRRLTKENNVPRKRTKFDNYMAVTLGLEGDDRDKVSTRVWDAVDSRLKLEAGPGVDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
VEWHSG KRQRQ FWT+VVH AC LL ++ T+GEEEFR HLRRLTKENNVPRKR+KF NY AVTLGLEG++ DKVS R+WD VD LK E GPGVDCLLTRVQ+RWP ARHVHRLDQDTSGLVVMALT EAAREMCRQFRERVPSKTYTAV+EGRM KT KSGEV AK+RPD DNRP+QMF +E GNEA T W+R+KR++DRT VDFTPVTGRTHQ++
Sbjct: 60 VEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIR 278
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A7S2WNF9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNF9_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.690e-29 Identity = 75/175 (42.86%), Postives = 113/175 (64.57%), Query Frame = 0
Query: 50 NVPRKRTKFDNYMAVTLGLEGDDRDKVSTRVWDAVDSRL-KLEAGPGV---DCLLTRVQARWP-TARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
+VPRK KF +Y +L +E D V +VWD + S++ + EA G+ D +L+RV+ TA VHRLD +TSG+++++L + RE+ RQFRERV KTY A+V G + + + G+V + D D+RPRQ+ D+ G EA T ++ V+R +DRT+V+ PVTGRTHQ++
Sbjct: 5 SVPRKLVKFRSYAQRSLRIEAGD---VVEQVWDIISSKMAEEEAQEGLEETDSVLSRVKTHIDRTAVAVHRLDCETSGVMLVSLNVDVTRELGRQFRERVVQKTYFAMVHGVVDQDE--GQVSVPLSADPDHRPRQVVDEVKGKEATTTYRVVQRFEDRTKVELHPVTGRTHQLR 174
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A1M6B4V3_9RHOB (Pseudouridine synthase n=2 Tax=Shimia gijangensis TaxID=1470563 RepID=A0A1M6B4V3_9RHOB) HSP 1 Score: 114 bits (285), Expect = 5.630e-28 Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 0
Query: 84 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
VD L + PG DCLLTR+Q +PTA VHRLD+DTSG++V LTP A R + QF +R KTY A +EGRM +KSG V + D +NRPRQM + G +A T W+ +K DD TRV +P +GRTHQ++
Sbjct: 16 VDKPAGLLSVPGRGDHLADCLLTRLQVAFPTALLVHRLDRDTSGVLVFGLTPHAQRNLSMQFEKRSTKKTYVARLEGRME--EKSGTVDLPLIVDWENRPRQMVCHDTGKQAVTDWRVLKVSDDDTRVRLSPKSGRTHQLR 154
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A7W2BME3_9HYPH (RNA pseudouridine synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W2BME3_9HYPH) HSP 1 Score: 114 bits (285), Expect = 9.260e-28 Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 0
Query: 84 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
+D L + PG +DCL+TR+ R+P AR VHRLD DTSG++V+A+ P A R + QF R KTY A+V+G + SG V IR D NRPRQM D G A T WQ + REDDR+R+ P+TGR+HQ++
Sbjct: 36 IDKPCGLLSVPGKGDDRLDCLITRLHKRYPQARIVHRLDLDTSGVMVIAMNPAAHRHLGLQFERRHVEKTYIALVDGNVAAD--SGRVDLPIRVDWPNRPRQMIDHAEGRSAVTDWQVLAREDDRSRIALRPLTGRSHQLR 174
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A099F4N7_9RHOB (Pseudouridine synthase n=1 Tax=Paracoccus halophilus TaxID=376733 RepID=A0A099F4N7_9RHOB) HSP 1 Score: 114 bits (284), Expect = 9.460e-28 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 0
Query: 97 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
DCL+ R++A +PT VHRLD DTSG++V ALTPEA R + RQF ER KTY A + GR+ K+G V + D NRPRQM D++ G ART W+ V+ +D TRV +PVTGR+HQ++
Sbjct: 42 DCLIARLRAAFPTILLVHRLDLDTSGVMVFALTPEAQRHLSRQFEERRTKKTYVARLWGRLQ--PKTGTVDLPLIVDWPNRPRQMVDRDRGRPARTDWRVVRADDMETRVRLSPVTGRSHQLR 162
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A1G3AV14_9BACT (Pseudouridine synthase n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3AV14_9BACT) HSP 1 Score: 114 bits (284), Expect = 1.180e-27 Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 97 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
DCL+ RVQ R+P AR VHRLD TSGL+V+A PE+ RE+ RQF+ R KTY A V G + SGEV +R D + RP Q+ D + G A+T WQ ++R +D R++ TPVTGRTHQ++
Sbjct: 49 DCLIHRVQKRFPKARIVHRLDFSTSGLMVIAQNPESHRELSRQFQNRETEKTYVAKVYG--CPDEPSGEVNLPLRCDLERRPLQIIDYQQGKTAQTFWQILERYEDSCRMELTPVTGRTHQLR 169
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: UPI00106F1B88 (RluA family pseudouridine synthase n=2 Tax=Paracoccus TaxID=265 RepID=UPI00106F1B88) HSP 1 Score: 113 bits (283), Expect = 1.330e-27 Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 0
Query: 84 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
VD L + PG DCL+ R++A +PT VHRLD DTSG++V ALTP A R + +QF R K+Y A V GRM + +G V A + D NRPRQM D E G ART W+ ++ DD TRV P+TGR+HQ++
Sbjct: 24 VDKPAGLLSVPGRGEDRADCLIARLRAAFPTVLLVHRLDLDTSGVMVFALTPHAQRHLNQQFERRQVKKSYVARVHGRMDRP--TGTVEAALIVDWPNRPRQMIDPENGRPARTDWRVIRASDDETRVRLFPLTGRSHQLR 162
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A2Z4UKY3_9HYPH (Ribosomal large subunit pseudouridine synthase A n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKY3_9HYPH) HSP 1 Score: 113 bits (283), Expect = 1.580e-27 Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 0
Query: 97 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
DCL TR + +PTA VHRLD DTSG++VMA+TP A R + QF +R KTYTA V G+MT+ + G VVA I D NRPRQM D E G A T WQ + RE +RV P TGR+HQ++
Sbjct: 48 DCLETRARIEFPTATIVHRLDMDTSGILVMAMTPNAHRHLGLQFEKRKTKKTYTARVWGKMTEDE--GTVVAPIITDWPNRPRQMIDFEKGRSAETRWQVLDREAGASRVALYPHTGRSHQLR 168
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: UPI00047597A7 (RluA family pseudouridine synthase n=1 Tax=Desulfovibrio oxyclinae TaxID=63560 RepID=UPI00047597A7) HSP 1 Score: 113 bits (282), Expect = 1.780e-27 Identity = 61/126 (48.41%), Postives = 85/126 (67.46%), Query Frame = 0
Query: 97 DCLLTRVQARWPTARH---VHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
DC++TRVQ +P R VHRLD DTSG++V+ LT A RE+ +QF +R SK Y A+++G + ++ G V +R D DNRP Q+ D E G A TLW+R+ E+ RTRV+F P+TGRTHQ++
Sbjct: 36 DCVVTRVQEMFPECRKYPTVHRLDMDTSGILVLGLTARAQRELSQQFHDREVSKRYVALLDGVLE--EEEGRVDLPLRLDVDNRPYQVVDFERGKPATTLWKRIAIENGRTRVEFVPLTGRTHQLR 159
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT) HSP 1 Score: 113 bits (283), Expect = 1.790e-27 Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = 0
Query: 97 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 219
DCL +R +A +P AR VHRLD+DTSG++VMA + RE+ RQF +R K Y AVV GR+ D G + A +R D D+ PRQ+ D E G A+T ++ ++R DDRTR++ +PVTGR+HQ++
Sbjct: 53 DCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVDD--GVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLR 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig46617.11761.1 ID=prot_H-elongata_contig46617.11761.1|Name=mRNA_H-elongata_contig46617.11761.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bpback to top |