prot_H-elongata_contig4657.11755.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4657.11755.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI) HSP 1 Score: 318 bits (816), Expect = 2.280e-92 Identity = 306/807 (37.92%), Postives = 368/807 (45.60%), Query Frame = 0
Query: 1 RAITFDTEGQSVFCASPSGLRRWSWDNDTATARLETMGDVAWGRVCAGALHYNADGRQILAASCAGARAVSAWAVDFDEESDNDDDVELIGPQRHQXXXXXXXXXXXXXXGERDMYGGVQPSRSPRTPPAAADAAAGPRSLSPRVLGSKSIAPAAL---VAVGGSRASDIYSDHRATACPDNSFGGQMRKNSSRPAEEGKWRNQSPGSPASAFRILERHLASPVAIAEDKSPLSSPAGSGSDGSPVPRYSRATVATAKASAKESVNDVTTVVSSSTGR---NRSIGTSVSDTLMLASCKSRGDTGGSTCNGADGQYRAAAWQDLQVKTEAEPVPGKRGGDTTGAPVDD--------VGASRGHDAKRRPERNFEARENKGRGGRDAGVGALVGDR-AEEKWLDAARAGR-RYRNARCIDVSEEKRSVMEAEDEKESETASNSRIMNDVWLEDGGKAGGGDSPPLLGSAESSPRL----------PRVAPSSSH--PPRGE------------NGVSGEVETVDAARS--------------------------------------ASAPASVDTITPSAVTSSGSLRNTDSRVNGDGGDELGRTRPRTATKRWDRPGPPSEDEVIANILLSRGALKSKLSERLDHLRHLRITWTEGDVSGSISRLKWLESLVTSVDASPRTVVADFLSVASLDGPRVTFEHCLELMPLLEDMWKLDTEKSVAAATRCFESVLRRFGGFVRDTLAAPMSAGCVDLARDGRVERCREAHRAFIRGYRHLDMVETEFYESSRIAAVAERLRPLFESYFMS 729
RAITFD +GQ ++CASPSGLRRWSWDNDTA+ARLE MGDV WG+V AGALHYNADG+Q S R + A + S + D + + XXXX XXXX M R P AA+ RS SP LG + P V VGG P ++ GG+++ + AE A+ + A+A S AGS +V T S++D + T +R+ G + D G G D AA + + + G+R D GA G + E+ E R G G D G G R A+EK G R NA + +V K+S + RI +V GG DSPPLLGS E +P P PSSS P R + + V + T D + S P + S G DELG TRPRTAT+RWDRPGPP +DEVIA LLSR S LS RL HLR LR W +GDVSG+IS+L LE T D SPRTVVADFL V LDG RVT +HCLELMPLLE +WKLD VAAATRC ES++RRFGGF+RDTLAAP++AG VDLAR+ R+ RCREAHRAFIRGY HL+ E EFYE RIAAVAERLRPLFESYFMS
Sbjct: 240 RAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQQQSRPS----RGNTFPASRDGQRSHSRDSKPTMEKEASGGDDGSXXXXCXXXXXXAGMPAFQVLGRQVVLLPTAAEEKV--RSSSP--LGGPAATPXXXXSGVTVGG---------------PSSAVGGRLQNRHAARAE---------AVAATVXXXXXXXXXTDDAVA-------SVAGS---------IRHRSVGT-------SISDTLVIADGGTADQADDRAGGREHRPAAWSEPAPGKDDGGN---YGRDSGRGVAAALGVVAAGDRHRLGGERRXXXXXXXXXDECKWHKRVAGAFAGVEGTADDEKGVERR---GDSGGDGSGGKNRGKRTADEKEARREEDGTDRAANAGVSSGVTPRFTVNPWP--KDSRVEAGGRIRTEV------PGGGQDSPPLLGSPEPAPAAASNPARSKNEPPSFPSSSRRSPDRPQPREKTHAVVTRSSAVGFPITTADGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEPEGL-----SVADIFGXXXXXXXXXXXXXXDELGMTRPRTATRRWDRPGPPGDDEVIAKTLLSRATATSTLSNRLTHLRMLRYGWADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKLDAGSCVAAATRCLESIVRRFGGFIRDTLAAPVAAGRVDLAREDRIARCREAHRAFIRGYHHLERSEGEFYEDRRIAAVAERLRPLFESYFMS 972
BLAST of mRNA_H-elongata_contig4657.11755.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE) HSP 1 Score: 264 bits (674), Expect = 1.640e-72 Identity = 290/821 (35.32%), Postives = 360/821 (43.85%), Query Frame = 0
Query: 1 RAITFDTEGQSVFCASPSGLRRWSWDNDTATARLETMGDVAWGRVCAGALHYNADGRQ---ILAASCAGARAVSAWAVDFDEESDNDDDVELIGPQRHQXXXXXXXXXXXXXXGERDMYGGVQPSRSPR--TPPAAADAAAGPRSLSPRVLGSKSIAPAALVAVGGSRASDIYSDHRATACPDNSFGGQMRKNSSRPAEEGKWRNQSPGSPASAFRILERHLASPVAIAEDKSPLSSP-----------------AGSGSDGSPVPRYSRATVATAKASAKES---------VNDVTTVVSSSTGRNRSIGTSVSDTLMLASCKSRGDTGGSTCNGADG-QYRAAAWQDLQVKTEAEPVPGKRGGDTTGAPVDDVG----ASRGHDAKRRPERNFEARENKGRGGRDAG---------VGALVGDRAEEKWLDAARAGRRYRNARCIDVSEEKRSVMEAEDEKES-------ETASN--------SRIMNDVWLED-----------GGKAGGGDSPPLLGSAESSPRL----------PRVAPSSSHPPRGENGVSGEVETVDAARSASAPASVDTIT----------------------------------------PSAVTSSGSLRNTDSRVNGDGGDELGRTRPRTATKRWDRPGPPSEDEVIANILLSRGALKSKLSERLDHLRHLRITWTEGDVSGSISRLKWLESLVTSVDASPRTVVADFLSVASLDGPRVTFEHCLELMPLLEDMWKLD----------TEKSVAAATRCFESVLRRFGGFVRDTLAAPMSAGCVDLARDGRVERCREAHR 690
RAITFD +GQ ++CASPSGLRRWSWDN A+A+LE MGDV WG+V AGALHYNADG+Q + AAS + A + +++ D L R G+ D V SR R T PA+ D G RS S R S + A+ D S AF++L R + AE+K+ SSP G S G R A A+A A +D V+ S R+RS+GTS+SDTL++A G T + A G ++R AAW +EP PGK D G V D G A+ G A +R+ + E + GG D G GA G E D + G R+ D S K DEKE+ + A+N SR+ D W +D G GG DSPPLLGS E +P P PSSS S + +TV RS++ + T P ++ + + G G DELG TRPRTAT+RWDRPGPP EDEVIA LLSR S LS R W +GDVSG+IS+L LE T D SPRTVVADFL V LDG RVT +HCLELMPLLE +WK+ T + VAAATRC ES++RRFGGF+RDTL AP++AG VDLAR+ RV RCREAHR
Sbjct: 219 RAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQQGRNLGAASESSAPLDTPARGATTTATESPSDPSLSTTDREY--------------GDADAK--VPESRPSRGNTFPASRD---GQRSHS--------------------RDSKPTMEKEASGGDDGSXXXXXXX-------------XXXXXXMPAFQVLGRQVVLLPTAAEEKAKPSSPXXXXXXXXXXXXXXXXVGGPASAGGG--RIQNRHAARAEAVAXXXXXXXXXXXXTDDAVASVAGSI-RHRSVGTSISDTLVIAD----GCTADQADDRAGGREHRPAAW--------SEPAPGK---DDGGNYVRDCGRGVAAALGVVAA--GDRHRLSGERRATGGADDGDECKWHKRVAGAFAG---VEGTADDEK-GMERRDDSGGDGSGGKTRGKGNADEKEARREGDGTDRAANVGVPSGVTSRMTVDPWPKDSWVEAEGRNRAGVPGGGEDSPPLLGSPEPAPAAASNPARSMNEPPSFPSSSRRSPDRPQPSDKTDTV-VTRSSAVGFPITTADGSISGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPEPEGLSVADIFGDGGGDCGGGGSDELGMTRPRTATRRWDRPGPPGEDEVIAKTLLSRATATSTLSNRYG--------WADGDVSGTISKLTRLERSATVADDSPRTVVADFLWVVPLDGTRVTLDHCLELMPLLEGLWKVAETPACLPSFLTTRCVAAATRCLESIVRRFGGFIRDTLTAPVAAGRVDLAREDRVARCREAHR 954
BLAST of mRNA_H-elongata_contig4657.11755.1 vs. uniprot
Match: UPI001B7E8E9A (LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 n=1 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7E8E9A) HSP 1 Score: 60.8 bits (146), Expect = 8.480e-6 Identity = 39/144 (27.08%), Postives = 72/144 (50.00%), Query Frame = 0
Query: 542 SEDEVIANILLSRGALKSKLSERLDHLRHLRITWTEGDVSGSISRLKWLESLVTSVDASPRTVVADFLSVASLDGPRVTFEHCLELMPLLEDMWKLDTEKSVAAATRCFESVLRRFGGFVRDTLAAPMSAGCVDLARDGRVERC 685
S+++ IA ++ G S + R L+ + W + DV IS + + + VVAD +S+ +++ VT + C L+PLL + + + ++ ++ + V+R FG + TL+A S G VD+ + R+ERC
Sbjct: 653 SDEDAIAGVMEQHGQFVSSMQSRSAKLQIVYRYWEKSDVKTVISAMAKM---------ADNAVVADVISIMTVNIDVVTLDICTCLLPLLTGLLESEIDRHLSISLDLLLKVVRIFGSVIYSTLSASSSVG-VDIEAEQRLERC 786 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4657.11755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig4657.11755.1 ID=prot_H-elongata_contig4657.11755.1|Name=mRNA_H-elongata_contig4657.11755.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=734bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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