prot_H-elongata_contig46530.11748.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46530.11748.1
Unique Nameprot_H-elongata_contig46530.11748.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: D8LB11_ECTSI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB11_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 7.840e-64
Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 KVRESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHRLAR 173
            +V ESTG+  PLPLLVKIAPDL+E+EK DIA VVL  KVDGL+VSNTTVSRP  L+S  K E GGLSG PL  ++T+T+RDMYRLT GK             VPL+GVGGV TG++AY+KIRAGASLVQ+YSLLV++GP  +P IK+ELA LL  DGF+SV EAVG+DHR  R
Sbjct:  300 QVCESTGNPMPLPLLVKIAPDLTEREKRDIANVVLSTKVDGLIVSNTTVSRPSYLRSESKGEAGGLSGKPLTKMSTETIRDMYRLTKGK-------------VPLIGVGGVGTGQEAYDKIRAGASLVQVYSLLVYKGPGAVPGIKAELADLLKTDGFTSVAEAVGSDHRPPR 459          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A0S7KLQ1_9TELE (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KLQ1_9TELE)

HSP 1 Score: 186 bits (473), Expect = 1.350e-57
Identity = 99/158 (62.66%), Postives = 116/158 (73.42%), Query Frame = 0
Query:   13 PLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            P+LVKIAPDLS Q+K+DIA VV E+ VDGL+VSNTTVSRP  LK  HK E GGLSG PLK L+T TVR+MY LT GK             VP++G+GGVA+G+DA +KIRAGASLVQLY+ L ++GP V+  IK EL  LL   GFS V EAVGADHR
Sbjct:   12 PVLVKIAPDLSAQDKQDIADVVTELGVDGLMVSNTTVSRPETLKDPHKSEAGGLSGQPLKDLSTKTVREMYNLTKGK-------------VPIIGIGGVASGQDAMDKIRAGASLVQLYTALTYQGPPVVTKIKRELEQLLKDQGFSCVSEAVGADHR 156          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A1A8ADS0_NOTFU (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8ADS0_NOTFU)

HSP 1 Score: 186 bits (471), Expect = 5.160e-57
Identity = 99/170 (58.24%), Postives = 121/170 (71.18%), Query Frame = 0
Query:    1 KVRESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            K R++       P+LVKIAPDL++Q+K DIA VV E+ VDGL+V+NTTVSRP  L+  HK E GGLSG PLK LAT TVR+MYRLT GK             VP++G+GGV++G+DA EKIRAGASLVQLY+ L ++GP V+  IK EL  LL   GFS V EAVGADH+
Sbjct:   22 KERDALQEKHKPPVLVKIAPDLTDQDKRDIADVVTELGVDGLMVTNTTVSRPETLQDPHKSEAGGLSGQPLKDLATKTVREMYRLTQGK-------------VPIIGIGGVSSGQDAMEKIRAGASLVQLYTALTYQGPPVVTKIKRELEQLLKDQGFSCVSEAVGADHK 178          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: UPI0014590845 (dihydroorotate dehydrogenase (quinone), mitochondrial-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014590845)

HSP 1 Score: 191 bits (485), Expect = 1.760e-56
Identity = 101/170 (59.41%), Postives = 127/170 (74.71%), Query Frame = 0
Query:    3 RESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMK--VDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            R S  S    P+LVKIAPDL++++KED+AAVV + +  +DGL+VSNTTVSRP  L+S HK E GGLSG+PL++LATDT+ DMY+LT GK             +P++GVGG+ATG+DAY+KIRAGASLVQLYS L++ GP V+  IK EL  LL  DGFSSV EAVG DH+
Sbjct:  239 RNSLKSDRKPPILVKIAPDLTQKDKEDVAAVVTKREGFIDGLIVSNTTVSRPSSLQSEHKVETGGLSGAPLRALATDTISDMYKLTKGK-------------LPIIGVGGIATGQDAYDKIRAGASLVQLYSALIYGGPPVVGKIKRELGQLLEVDGFSSVTEAVGIDHK 395          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A210PJJ5_MIZYE (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PJJ5_MIZYE)

HSP 1 Score: 191 bits (485), Expect = 1.800e-56
Identity = 97/170 (57.06%), Postives = 128/170 (75.29%), Query Frame = 0
Query:    3 RESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMK--VDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            R+S  +    P+LVKIAPDL++++KED+AAVV + +  +DGL++SNTT+SRP  L+S HK E GGLSG+PL++LATDT+ DMYRLT G              +P++GVGG++TG+DAYEKIRAGASLVQLYS L++ GP V+  IK EL  +L ADGFSS+ EAVG DH+
Sbjct:  239 RDSLKNDQKPPILVKIAPDLTQKDKEDVAAVVTKREGYIDGLIISNTTISRPSSLQSGHKTETGGLSGAPLRALATDTISDMYRLTRGT-------------LPIIGVGGISTGQDAYEKIRAGASLVQLYSALIYGGPPVVKKIKRELGQILEADGFSSIAEAVGKDHK 395          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: H9GDG6_ANOCA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Anolis carolinensis TaxID=28377 RepID=H9GDG6_ANOCA)

HSP 1 Score: 186 bits (471), Expect = 3.510e-56
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 0
Query:    9 ASPLP-LLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHRL 171
            A P P +LVKIAPDL+ QEK+DIA+VV E+ VDGLVV+NTTVSRP  L  AH+ E GGLSG PL+ L+T+TVR+MY LT G+             VP++GVGG+ +G+DA EKIRAGASLVQLY+ L ++GP V+  +K ELAALL   GF SV+EAVGADHRL
Sbjct:   94 AEPKPAVLVKIAPDLTAQEKQDIASVVCELGVDGLVVTNTTVSRPDSLHGAHRDEVGGLSGPPLRPLSTETVREMYALTKGR-------------VPIIGVGGICSGQDALEKIRAGASLVQLYTALAYQGPPVVWAVKQELAALLREQGFQSVQEAVGADHRL 244          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A1A8G5I3_9TELE (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8G5I3_9TELE)

HSP 1 Score: 184 bits (468), Expect = 6.960e-56
Identity = 99/170 (58.24%), Postives = 120/170 (70.59%), Query Frame = 0
Query:    1 KVRESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            K R++       P+LVKIAPDL++Q+K DIA VV E+ VDGL+V+NTTVSRP  L+  HK E GGLSG PLK LAT TVR+MYRLT GK             VP++G+GGV +G+DA EKIRAGASLVQLY+ L ++GP V+  IK EL  LL   GFS V EAVGADH+
Sbjct:   72 KERDALQEKHKPPVLVKIAPDLTDQDKRDIADVVTELGVDGLMVTNTTVSRPETLQDPHKSEAGGLSGQPLKDLATKTVREMYRLTQGK-------------VPIIGIGGVFSGQDAMEKIRAGASLVQLYTALTYQGPPVVTKIKRELEQLLKDQGFSCVSEAVGADHK 228          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A151MVL3_ALLMI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151MVL3_ALLMI)

HSP 1 Score: 182 bits (461), Expect = 1.020e-55
Identity = 95/157 (60.51%), Postives = 119/157 (75.80%), Query Frame = 0
Query:   14 LLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            +LVKIAPDLS Q+K DIA+VV E+ VDGL+V+NTTVSRP  L+ A + E GGLSG PL+ L+T+TVR+MY LT G+             VP++GVGGV++G+DA +KIRAGASLVQLY+ L +RGP V+  +K ELAALL   GF+SV EAVGADHR
Sbjct:   22 VLVKIAPDLSAQDKRDIASVVSELGVDGLIVTNTTVSRPSSLRGAARAEAGGLSGQPLRDLSTETVREMYCLTQGR-------------VPIVGVGGVSSGQDALDKIRAGASLVQLYTALTYRGPPVVGTVKRELAALLRKQGFASVTEAVGADHR 165          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: A0A6P3VLW9_CLUHA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VLW9_CLUHA)

HSP 1 Score: 189 bits (481), Expect = 1.100e-55
Identity = 99/161 (61.49%), Postives = 123/161 (76.40%), Query Frame = 0
Query:   12 LPLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHRLA 172
            +P+LVKIAPDL+ Q+K+DIA VVLE+ VDG+VVSNTTVSRP  LK +  KE GGLSG PLK++AT+ VRDMYR+T GK             +P++GVGG+A+G+DA +KIRAGASLVQLY+ LV++GP V+  IK EL  LL   GF+SV EAVGADHR A
Sbjct:  248 VPVLVKIAPDLTAQDKQDIADVVLELGVDGIVVSNTTVSRPAALKDSASKETGGLSGQPLKAMATEVVRDMYRMTGGK-------------IPIIGVGGIASGQDALDKIRAGASLVQLYTALVYQGPPVVTKIKRELDQLLKEQGFASVSEAVGADHRSA 395          
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Match: UPI0018D7F25E (dihydroorotate dehydrogenase (quinone), mitochondrial-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7F25E)

HSP 1 Score: 189 bits (480), Expect = 1.140e-55
Identity = 97/160 (60.62%), Postives = 124/160 (77.50%), Query Frame = 0
Query:   13 PLLVKIAPDLSEQEKEDIAAVVL--EMKVDGLVVSNTTVSRPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAALLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELAALLNADGFSSVEEAVGADHR 170
            PLLVKIAPDL++Q+KEDIAAVV   E KVDGL+V+NTT++RP  L+S HK EGGGLSG PL+ +ATDTVRDMYRLT G+             +P++GVGGV++G+DAYEKI+AGA LVQLY+ L + GP ++  IK EL  LL ADG+++V EA+G+DHR
Sbjct:  254 PLLVKIAPDLTQQDKEDIAAVVTRKEGKVDGLIVTNTTITRPASLQSPHKAEGGGLSGPPLRHMATDTVRDMYRLTQGE-------------LPIIGVGGVSSGQDAYEKIKAGACLVQLYTALAYEGPPLVKRIKRELDELLRADGYNTVSEAIGSDHR 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46530.11748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB11_ECTSI7.840e-6464.74Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A0S7KLQ1_9TELE1.350e-5762.66Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A1A8ADS0_NOTFU5.160e-5758.24Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
UPI00145908451.760e-5659.41dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A210PJJ5_MIZYE1.800e-5657.06Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
H9GDG6_ANOCA3.510e-5660.98Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A1A8G5I3_9TELE6.960e-5658.24Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A151MVL3_ALLMI1.020e-5560.51Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A6P3VLW9_CLUHA1.100e-5561.49Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
UPI0018D7F25E1.140e-5560.63dihydroorotate dehydrogenase (quinone), mitochondr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005720Dihydroorotate dehydrogenase domainPFAMPF01180DHO_dhcoord: 11..153
e-value: 1.1E-38
score: 133.2
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..173
e-value: 1.6E-57
score: 196.8
NoneNo IPR availablePANTHERPTHR43517:SF2DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIALcoord: 4..169
NoneNo IPR availablePANTHERPTHR43517FAMILY NOT NAMEDcoord: 4..169
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 4..169
IPR001295Dihydroorotate dehydrogenase, conserved sitePROSITEPS00912DHODEHASE_2coord: 105..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46530contigH-elongata_contig46530:2599..4224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46530.11748.1mRNA_H-elongata_contig46530.11748.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46530 2599..4224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46530.11748.1 ID=prot_H-elongata_contig46530.11748.1|Name=mRNA_H-elongata_contig46530.11748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
KVRESTGSASPLPLLVKIAPDLSEQEKEDIAAVVLEMKVDGLVVSNTTVS
RPRGLKSAHKKEGGGLSGSPLKSLATDTVRDMYRLTHGKARGRGNQWAAA
LLVPLLGVGGVATGRDAYEKIRAGASLVQLYSLLVFRGPAVIPDIKSELA
ALLNADGFSSVEEAVGADHRLAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005720Dihydroorotate_DH
IPR013785Aldolase_TIM
IPR001295Dihydroorotate_DH_CS