prot_H-elongata_contig46492.11746.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46492.11746.1
Unique Nameprot_H-elongata_contig46492.11746.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length308
Homology
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 3.010e-81
Identity = 135/242 (55.79%), Postives = 170/242 (70.25%), Query Frame = 0
Query:    1 MEWVSSLGHNVTIAVLSVDSVSDEADADLESWEPCRPYYLQDLVSVEFNQSDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDSIATSLAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEGGQGANEDPTALAPGTCGIEDVVGYGYNLN-ETLSEIDVP--TPSPSASHGERDDSGALGSPNSDSGGDPENDWWIA 239
            +E   S+     +A L V+  S   D DL++W PCRPYYLQDLV+      +T  +LVRETIG E + GP++++ N+T+DE+ +W LEGS +HPFHMHVNHMQFA V+GP LVPGWNHVGDWVD+++T++AVVRFRTERYGGHV MHCHVNSHSD G+MAV  ++GG+G NEDP ALA GTCGIE V GYGYNL+ +  +E D        SA+  ER   G           DPE+ WW+A
Sbjct:  926 IESTRSINSTTPLAALYVEGGSSSPDDDLDTWTPCRPYYLQDLVNATLG-GETLGLLVRETIGDEFYSGPENFVVNMTVDEIQEWMLEGSEQHPFHMHVNHMQFAIVDGPSLVPGWNHVGDWVDTVSTTVAVVRFRTERYGGHVAMHCHVNSHSDTGVMAVADIDGGEGPNEDPIALAAGTCGIEGVAGYGYNLSADDTAETDEDGYDDDASATAEERATVGXXXXXXXXXXXDPEDTWWVA 1166          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.490e-29
Identity = 77/190 (40.53%), Postives = 97/190 (51.05%), Query Frame = 0
Query:   12 TIAVLSVDSVSDEADADLESWEPCRPYYLQDLVSVEFNQSDTEIVL-VRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADV----EGPGLVPGWNHVGDWVDSIATSLAV-VRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEGGQGANEDPTALAPGTCGIEDVVGYGYNLN 195
            TIA ++V          L  W PCRP YL D   V          L VR+ +  + F  P +Y+  ++   +  W + GS +HP H+HV+HMQ   V    + PG  P WN  GDWVDSI+   AV V  R ERYGGH  MHCH+  HSD+GIMAV+YV  G  A   P     GTC   + V   Y  N
Sbjct:  715 TIATITVTPFLRPPADPLPLWAPCRPGYLTDARKVPRRLRGPPFDLTVRDALNGQKFTSPDTYIRTMSNRNLEAWQITGSDKHPLHIHVDHMQLGAVGVTNQWPGA-PNWNMPGDWVDSISAPGAVPVYMRPERYGGHRVMHCHIAEHSDMGIMAVMYVRYGSTAKPFPYVKNWGTCPKAEPVSTPYGGN 903          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A836CIZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ3_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.050e-24
Identity = 62/163 (38.04%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   12 TIAVLSVDSVSDEAD-ADLESWEPCRPYYLQDLVSVEFNQSDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGL-------VPGWNHVGDWVDSIATSLAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEG 166
            ++A+   D+V      A L +W PCRP YLQ L+      ++   VL++  +   L+    + L  + + + Y+W LE +  HP+HMHVNHMQ A V G           PGW+  GDWVD+ +     VRFR ERY G++ +HCHV  H+D G+MA+V + G
Sbjct:  875 SLAITKADAVPGPYGIAPLPTWRPCRPAYLQSLLLEPVPTANQYSVLMQTGVNGALY-SEGTVLKQVHLGQTYEWQLENTITHPWHMHVNHMQ-ASVAGESCGMNCCREYPGWHVAGDWVDTYSGPDGKVRFRPERYAGYMIVHCHVYVHADKGMMALVTING 1035          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A835Z3E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.850e-23
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 0
Query:    6 SLGHNVTIAVLSVDSVSDEADADLESWEPCRPYYLQDLVSVEFNQSDT-EIVLVRETIGQELFLGPKS-YLYNLTIDE--VYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDSIATS-LAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEGGQGANEDPTAL 177
            S    + +A L+V + +    A L +W+PCRP+YL DL  V    +++  I L+   I  + + G  + YL      E    Q ++ G+++H FHMHVNH Q       G V  W   GDW+D+ A++   +V+FR +RYGG +  HCHV  HSD G+MA + + GG   +   TA+
Sbjct:  978 SFTTKLKVATLTVAAGTAVDAATLPAWKPCRPFYLSDLRPVTVAAANSLAITLINGAINDQSWKGAATPYLNKDPFAEGVAAQASIAGTSQHQFHMHVNHFQLQAAYEAGGVANWYKAGDWLDTFASADTGIVKFRVDRYGGDMICHCHVFEHSDTGMMARIALSGGVATDSTNTAV 1154          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.980e-18
Identity = 61/180 (33.89%), Postives = 95/180 (52.78%), Query Frame = 0
Query:   12 TIAVLSVDSVSDEADADLESWEPCRPYYLQDLV-SVEFNQSDTEIVLVRETIGQ---ELFLG--PKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFA-DVEGPGLVPG-WNHVGDWVDSIATS-LAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEGGQGANEDPTALAPGTC 182
            TIA ++V + +      L   +PCRP YL D+V +    Q D  I +   ++      L+ G    + +  +T+ + YQW ++GS  HPFH HVNHM  + D++    V   W+  GDW+DSI+    A V  R + + G + MHCH+ +H+D+G+M    +EG     +D  A   GTC
Sbjct:  634 TIATITVGAAAGAPAPALPKLKPCRPGYLMDIVPTAATEQVDLTIRVDGFSVNNLPGALYTGVADAAPMTTMTLGQPYQWVIDGSANHPFHAHVNHMMLSVDIQPWDQVQANWHMPGDWLDSISVQGQAPVLIRPDHFSGPMVMHCHIAAHADMGLMGFSTIEG-----KDVVAEDWGTC 808          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A7S4AR43_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AR43_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.210e-15
Identity = 53/165 (32.12%), Postives = 91/165 (55.15%), Query Frame = 0
Query:    4 VSSLGHNVTIAVLSVDSVSDEA-DADLESWEPCRPYYLQDLVSVEF-NQSDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDSIATSLAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEG 166
            ++ L  +  +A++++ S S      +L  W+P RP  +Q + S+   +++   I + R++I  + +  P + L +L  +EV++W L  + +HPFH+H+ HMQ     G G   G+   G++ D+I+     VRFRT  +G  + +HCHV  HSDLG M    V G
Sbjct:  573 INILFDDKIVAIVNIKSDSSSTLRRELGRWKPKRPLSIQSMESITVQDENRLAIKIKRDSINGKEW-DPSTPLKSLAFNEVHEWELPDTRQHPFHIHLYHMQVVTPNGCG--DGYRE-GEFYDTISARPCTVRFRTSNFGQRLVVHCHVMLHSDLGSMGWFDVRG 733          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A835ZB31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB31_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.220e-15
Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 0
Query:   29 LESWEPCRPYYLQDLVSVEFNQSDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDSIATS-LAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEGGQGA 170
            L  W PCRP YL+DL +    +  T ++ +  +I +  +    + +    +   Y+W  E + +HP HMHVNH+Q            W+  GDWVD+I  S +   RFR ER         HV  HSDLG+MAVV ++GG  A
Sbjct: 1156 LPMWRPCRPAYLRDLRADAVAKDHTFMITLEGSINRTPY-AQGAVMTTAMLGATYEWTAEMTNQHPLHMHVNHVQLLAPPNFKEARDWHRDGDWVDTITGSDMVKFRFRPER---------HVFGHSDLGMMAVVQIQGGNTA 1288          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A7Y2GKD5_9ACTN (Multicopper oxidase domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKD5_9ACTN)

HSP 1 Score: 80.1 bits (196), Expect = 5.250e-13
Identity = 68/214 (31.78%), Postives = 93/214 (43.46%), Query Frame = 0
Query:   10 NVTIAVLSVDSVSDE-----ADADLESWEPCRPYYLQDLVSVEFNQSDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDSIATSLAVVRFRTER-----YGGHVTMHCHVNSHSDLGIMAVVYVEGGQGANEDPTALAPGTCGIEDVVGYGYNLNETLSEIDVPTPSPSASHG 213
            N T+A + V   +D      A   + SW   RP YL+DL SV    +++  +  R TI  + F  P +  + L+ D V +W L G+  HPFH+HV HMQ     G          G++ D++A     VRF  +      Y G   MHCH+  H D G M  V V GG      P  + P        +G GY+         VP   PSA  G
Sbjct:  328 NTTVASVEVSGPADPGPHPYAADGVSSWSANRPSYLRDLSSVATVNTESVSIGAR-TINNDKF-DPDTPTFTLSADMVQEWTLSGANNHPFHLHVYHMQTFGCGGDF------EDGEYYDTVAGD-CTVRFDLDAVTGSAYAGRTIMHCHILDHEDRGAMGWVDVIGGT-----PPPVLP--------IGQGYSQYYA-----VPADPPSAPSG 514          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A813EF02_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EF02_POLGL)

HSP 1 Score: 73.2 bits (178), Expect = 4.440e-11
Identity = 58/163 (35.58%), Postives = 77/163 (47.24%), Query Frame = 0
Query:   15 VLSVDSVSDEADAD-LESWEPC-RPYYLQDLVSVEFNQSD----TEIVLVRET--IGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDS---IATSLAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEG 166
            +L++ ++    DA  L  W+P  RP YLQDL   E    D    T + L   T  I   L+ GPK YL+    D V +  + G  +H +H H    Q  D   P     +   GDW DS   I  S   VRF T  Y G   +HCH+ SHSD+G++ V  V G
Sbjct:   66 LLTLRTLGPVVDAGVLLPWKPLSRPTYLQDLRG-ELTAPDCRCMTPLGLGGNTKWISGHLYEGPKQYLHQWPQDAVAERVISGVDKHTYHQHTWPFQLQD--DPAGADPYFKAGDWHDSYQNIVDSQVTVRFSTVDYSGPEIVHCHILSHSDMGMIGVELVRG 225          
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Match: A0A813KLB1_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KLB1_POLGL)

HSP 1 Score: 73.2 bits (178), Expect = 9.710e-11
Identity = 58/163 (35.58%), Postives = 77/163 (47.24%), Query Frame = 0
Query:   15 VLSVDSVSDEADAD-LESWEPC-RPYYLQDLVSVEFNQSD----TEIVLVRET--IGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVNHMQFADVEGPGLVPGWNHVGDWVDS---IATSLAVVRFRTERYGGHVTMHCHVNSHSDLGIMAVVYVEG 166
            +L++ ++    DA  L  W+P  RP YLQDL   E    D    T + L   T  I   L+ GPK YL+    D V +  + G  +H +H H    Q  D   P     +   GDW DS   I  S   VRF T  Y G   +HCH+ SHSD+G++ V  V G
Sbjct:  344 LLTLRTLGPVVDAGVLLPWKPLSRPTYLQDLRG-ELTAPDCRCMTPLGLGGNTKWISGHLYEGPKQYLHQWPQDAVAERVISGVDKHTYHQHTWPFQLQD--DPAGADPYFKAGDWHDSYQNIVDSQVTVRFSTVDYSGPEIVHCHILSHSDMGMIGVELVRG 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46492.11746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE3.010e-8155.79PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZCB5_9STRA1.490e-2940.53CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CIZ3_9STRA2.050e-2438.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3E9_9STRA5.850e-2335.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUJ5_9STRA1.980e-1833.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4AR43_9STRA1.210e-1532.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A835ZB31_9STRA1.220e-1535.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7Y2GKD5_9ACTN5.250e-1331.78Multicopper oxidase domain-containing protein n=1 ... [more]
A0A813EF02_POLGL4.440e-1135.58Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813KLB1_POLGL9.710e-1135.58Hypothetical protein n=3 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011706Multicopper oxidase, type 2PFAMPF07731Cu-oxidase_2coord: 67..165
e-value: 1.6E-8
score: 34.4
IPR008972CupredoxinGENE3D2.60.40.420coord: 41..180
e-value: 6.1E-15
score: 56.7
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 73..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availableTMHMMTMhelixcoord: 238..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46492contigH-elongata_contig46492:1416..3624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46492.11746.1mRNA_H-elongata_contig46492.11746.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46492 179..3727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46492.11746.1 ID=prot_H-elongata_contig46492.11746.1|Name=mRNA_H-elongata_contig46492.11746.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=308bp
MEWVSSLGHNVTIAVLSVDSVSDEADADLESWEPCRPYYLQDLVSVEFNQ
SDTEIVLVRETIGQELFLGPKSYLYNLTIDEVYQWNLEGSTEHPFHMHVN
HMQFADVEGPGLVPGWNHVGDWVDSIATSLAVVRFRTERYGGHVTMHCHV
NSHSDLGIMAVVYVEGGQGANEDPTALAPGTCGIEDVVGYGYNLNETLSE
IDVPTPSPSASHGERDDSGALGSPNSDSGGDPENDWWIAVVAGAAVGLTG
LGAVAVCCVASSRYRHRKTKEAPVRNAPRPDENENGHDGHSREAKNEDLT
EMKIEEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011706Cu-oxidase_2
IPR008972Cupredoxin