prot_H-elongata_contig46431.11735.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46431.11735.1
Unique Nameprot_H-elongata_contig46431.11735.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length362
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46431.11735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..360
e-value: 1.3E-18
score: 68.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 43..327
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 180..360
coord: 4..200
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 180..360
coord: 4..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46431contigH-elongata_contig46431:2218..3303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46431.11735.1mRNA_H-elongata_contig46431.11735.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46431 2218..3303 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46431.11735.1 ID=prot_H-elongata_contig46431.11735.1|Name=mRNA_H-elongata_contig46431.11735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp
MPRNADLCGKAARVGNVGALRCARRHGCPLSARIGSRTINACDEAASEGH
LGALQWARVNGCPWDAQTSSKAAAGGHLRVLMWAQICGCPWDAWTCAKAA
ENGHMIVLKWSRSNGCPWDGTTCSGAAAGGHLRLLQWAHANGCPWDGRTC
AEAALAGHLDILQWARANGCPWSLTTSYRAAERGQLDTLKWARANGCPYD
SSMCYNAAFKGHLKVIRWARAINCPWDTYTCCKAAEGGHLNILRWARMNG
CPWDSKTCAGAAKGGHLHILQWAFANGCPWDAKTSVGAASEGHLEVLQWA
RANGCPWTKFVCAQAAAGGHIDVLKWARANGCPWDETTIAWAKREERMAI
VAWARKNGCPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf