prot_H-elongata_contig46418.11733.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46418.11733.1
Unique Nameprot_H-elongata_contig46418.11733.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length186
Homology
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A6H5J694_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J694_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 1.300e-101
Identity = 153/184 (83.15%), Postives = 165/184 (89.67%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNT--QAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 184
            V SVLYQRGVYHPD FAREAKY ITTLVTTDE LKKYL+NVI+QLK WLL+ ELQRLVLVIVGTDSG+TLERWTFNVHKEERP L+DGSN   Q  RKS+K I +EIQNVIRQITSSVTFLP+LDEPCSFDLLVYT NDA VP+GWD+SD +CIKDSSEV LRSFSTKIHKVDTVVSYKN+ DE
Sbjct:   31 VNSVLYQRGVYHPDGFAREAKYGITTLVTTDEALKKYLDNVIKQLKEWLLEKELQRLVLVIVGTDSGDTLERWTFNVHKEERPALKDGSNAGDQQPRKSQKAITQEIQNVIRQITSSVTFLPLLDEPCSFDLLVYTGNDATVPSGWDDSDPRCIKDSSEVSLRSFSTKIHKVDTVVSYKNKTDE 214          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A836CIY9_9STRA (DNA-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 3.240e-65
Identity = 109/193 (56.48%), Postives = 143/193 (74.09%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKG--------WLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPV-LQDGS-NTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDEL 185
            + S+LYQRG+Y  +SF+++ KY +T + T D GLK YL+NVI+Q+ G        W+L  E+QRLVLVI G +SGE LERW F+V  E  P  L++ S N  A RKS+K+I  EIQ +IRQIT+SVTFLP+L EPC+FDLLVYT+  A VP  W+ESD + I DSS+VKLRSFSTK+HKVDT+V+++N+ D L
Sbjct:   29 INSILYQRGIYPAESFSKQQKYGLTMMTTEDMGLKAYLDNVIKQMHGKWPSKLCRWMLRDEVQRLVLVISGVESGEALERWAFHVQGEPAPAPLKEASGNAPAPRKSQKDICNEIQAIIRQITASVTFLPLLSEPCAFDLLVYTNKSATVPIQWEESDPRYIADSSQVKLRSFSTKVHKVDTLVAFRNQSDAL 221          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S1G3K4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3K4_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.310e-64
Identity = 102/182 (56.04%), Postives = 135/182 (74.18%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 184
            + S+LYQRG+Y P+SF+  ++Y ++ LVTTD+GLK YL  V+ QL  WL   E+Q+LV+VI G DSG+ LERW FNV  ++      G     V KS KEI+KEIQ +IRQIT+SV+FLP+LDEPC+FDLLVYTD D  VP  W+ESD + I +S+EV+LRSF+TK+HKVD +V+YK   D+
Sbjct:   31 INSILYQRGIYPPESFSAVSQYGLSMLVTTDDGLKGYLSQVLGQLSSWLSRGEVQKLVVVITGVDSGDVLERWVFNVETDKSITASGGG----VEKSAKEIQKEIQAIIRQITASVSFLPLLDEPCTFDLLVYTDADTDVPRSWEESDPQYISNSTEVRLRSFTTKVHKVDAMVAYKTGDDD 208          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A2R5FZ78_9STRA (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZ78_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.470e-64
Identity = 102/182 (56.04%), Postives = 138/182 (75.82%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 184
            + S+LYQRG+Y P++F R +KY +  LVT DE L  YLE V++QL+ WL++  +Q+LVLVI G +S E LERW FNV  + + V   G+  +A +K +KEI  EIQ +IRQIT+SVTFLP+L+EPC+FDLLV+TD D +VP  W+ESD + I D+++VKLRSF+TKIHKVDT VSY+N  D+
Sbjct:   28 INSILYQRGIYPPETFKRVSKYGLALLVTEDEFLSNYLEQVLKQLESWLMEGTVQKLVLVITGVESKEVLERWVFNVEAD-KSVTATGNPLEAKQKPRKEIMNEIQAIIRQITASVTFLPLLNEPCTFDLLVHTDCDTEVPQTWEESDPRHIADATDVKLRSFTTKIHKVDTCVSYRNCVDD 208          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A8J5XKU7_DIALT (HORMA domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKU7_DIALT)

HSP 1 Score: 204 bits (520), Expect = 5.630e-64
Identity = 104/181 (57.46%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPD 183
            V S+LYQRG+Y P++F + +KY +T LVTTD GL  YLE V+ QL  WL+D  +Q+LV+VI G +SG+TLERW F+V  ++ P   DG++ +A  + +KE+  EIQ +IRQIT+SVTFLP+LDE C+FDLLVYTD D  VP+ W+ESD K I  S EVKLRSF+TKIHKVD  VSY    D
Sbjct:   26 VNSILYQRGIYPPETFKKVSKYGLTMLVTTDAGLSDYLEQVLSQLSMWLIDRSVQKLVVVIAGQESGKTLERWVFDVRADKLP---DGASVEA--RPEKELTSEIQAIIRQITASVTFLPLLDEACTFDLLVYTDTDVNVPSAWEESDPKYIAKSEEVKLRSFTTKIHKVDAAVSYLAEDD 201          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A6U9WAU7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9WAU7_9STRA)

HSP 1 Score: 205 bits (522), Expect = 6.400e-64
Identity = 104/198 (52.53%), Postives = 139/198 (70.20%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVL-----------------QDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPD 183
            + S+LYQRG+Y P++F RE+KYD+T L TTD+GL KYL  V+ Q++ WLL+ ++QRLV+V+ G DSGETLERW FNV  ++   +                  DG+  +  RK  KEI  EIQ +IRQIT+SVTFLP+L+EPCSFDLLVYT  DA VP+ W++SD   I +S EVKLRSF+T +HKVD++V+Y+   D
Sbjct:   27 INSILYQRGIYQPETFKRESKYDLTVLTTTDDGLLKYLSQVMAQMESWLLNGDVQRLVVVVSGVDSGETLERWQFNVALDDEAGVAGTDENRAPNPNVNDSNSDGNINKKNRKRLKEIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYTKKDAAVPSKWEDSDPCYIMNSQEVKLRSFTTSVHKVDSMVAYREAED 224          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A061QUQ8_9CHLO (Mitotic spindle assembly checkpoint protein MAD2 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUQ8_9CHLO)

HSP 1 Score: 202 bits (514), Expect = 6.310e-63
Identity = 101/183 (55.19%), Postives = 134/183 (73.22%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDEL 185
            V S+LYQRGVY P+SF  + KY +  ++T+DE L +YL NV++QL  WLL+ +LQRLVLV+    S E LERW FN+  ++  +     N     KSKKEI  EIQ +IRQIT+SVTFLP+LDE CSFDLL+YTD +A VP  W+ESD++ I +++EVKLRSFSTK+HK+D++V+YK   D L
Sbjct:   28 VNSILYQRGVYPPESFEGQKKYGLNMMITSDEKLTEYLNNVLKQLHEWLLNRQLQRLVLVVSSIQSKEVLERWAFNIETDKEVLSARDPNLVKREKSKKEITSEIQAIIRQITASVTFLPLLDESCSFDLLMYTDANADVPQQWEESDARFISNAAEVKLRSFSTKVHKIDSMVTYKMEDDNL 210          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S3PXY9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXY9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.150e-62
Identity = 104/197 (52.79%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVH---KEERPVLQDGS-------NTQAVR----------KSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYK 179
            + S+LYQRG+Y P++F RE+KY +T L TTDEGL KYL N++ Q++ WLLD ++QRLV+V+ G DSGETLERW FNV    KE++    +G+       NT+ +           KS ++I  EIQ +IRQIT+SVTFLP+L+EPCSFDLLVYT+  A VP  W++SD + I +S EVKLRSF+T +HKV+++V+YK
Sbjct:   27 INSILYQRGIYQPETFRRESKYGLTVLTTTDEGLLKYLNNIMSQMESWLLDGDVQRLVVVVTGVDSGETLERWQFNVSVDDKEKQAGKSNGNENDAAGINTKNINLPDGTKGKTGKSVRDIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYTNQTAVVPQKWEDSDPRYIMNSQEVKLRSFTTSVHKVESMVAYK 223          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A5A8DN77_CAFRO (HORMA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN77_CAFRO)

HSP 1 Score: 200 bits (508), Expect = 4.970e-62
Identity = 95/182 (52.20%), Postives = 136/182 (74.73%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 184
            + S+L+QRG+Y P++F + AKY +  LV+TDEGLK YL +V+ Q+ GWLL+ ++Q+LV+VI G DSGETLERW FN+  ++  V    S+ + +    KEI++EI  +IRQIT+SV+FLP+L EPC+FDLLVYTD DA VP  W++SD + IKD  +++LRSF+T++HKV   VSY+   D+
Sbjct:   31 INSILFQRGIYPPETFDKVAKYGLPMLVSTDEGLKSYLSHVLTQISGWLLEGKVQKLVVVITGADSGETLERWVFNISPDKAAVTGGKSSDKPL----KEIQQEIAGIIRQITASVSFLPLLSEPCAFDLLVYTDPDAVVPRAWEDSDPRYIKDGEDMQLRSFTTRVHKVSAAVSYRRGDDD 208          
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S0LS95_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS95_9EUKA)

HSP 1 Score: 201 bits (510), Expect = 5.770e-62
Identity = 100/180 (55.56%), Postives = 131/180 (72.78%), Query Frame = 0
Query:    3 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRP 182
            + S+LYQRG+Y P+SF R +KY +  LVTT+ GL  YL++V+EQLK WL    +Q+LV+ + G  + ETLERW F V  +   V  +G+    V K +KE+  EIQ +IRQIT+SVTFLP+LDEPC+FDLLVYTD+D +VP  W+ESD K I +S EVKLRSF+TK+HKVD  V+YK  P
Sbjct:   62 INSILYQRGIYPPESFKRVSKYGLAMLVTTEPGLVTYLKSVLEQLKEWLAKGNVQKLVIAVTGQSTNETLERWVFEVQTDSAAVGANGT----VDKPEKEVMSEIQAIIRQITASVTFLPLLDEPCTFDLLVYTDDDVEVPKAWEESDPKYIANSDEVKLRSFTTKVHKVDASVTYKADP 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J694_9PHAE1.300e-10183.15HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIY9_9STRA3.240e-6556.48DNA-binding protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S1G3K4_9STRA1.310e-6456.04Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5FZ78_9STRA5.470e-6456.04Mitotic spindle assembly checkpoint protein MAD2A ... [more]
A0A8J5XKU7_DIALT5.630e-6457.46HORMA domain-containing protein n=1 Tax=Diacronema... [more]
A0A6U9WAU7_9STRA6.400e-6452.53Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A061QUQ8_9CHLO6.310e-6355.19Mitotic spindle assembly checkpoint protein MAD2 n... [more]
A0A7S3PXY9_9STRA1.150e-6252.79Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A5A8DN77_CAFRO4.970e-6252.20HORMA domain-containing protein n=3 Tax=Cafeteria ... [more]
A0A7S0LS95_9EUKA5.770e-6255.56Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 1..170
e-value: 1.1E-20
score: 74.1
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 1..176
score: 38.927
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 1..182
e-value: 1.9E-59
score: 202.4
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 3..180
NoneNo IPR availablePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 3..180
IPR027097Mitotic spindle checkpoint protein Mad2PANTHERPTHR11842:SF11MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Acoord: 3..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46418contigH-elongata_contig46418:1049..2639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46418.11733.1mRNA_H-elongata_contig46418.11733.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46418 1049..2639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46418.11733.1 ID=prot_H-elongata_contig46418.11733.1|Name=mRNA_H-elongata_contig46418.11733.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp
MGVRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGW
LLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSK
KEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESD
SKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
IPR036570HORMA_dom_sf
IPR027097Mad2