prot_H-elongata_contig46355.11727.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46355.11727.1
Unique Nameprot_H-elongata_contig46355.11727.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length211
Homology
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BLAST of mRNA_H-elongata_contig46355.11727.1 vs. uniprot
Match: D7FHW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW6_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 8.310e-10
Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:  135 MEDRIKLEVQTLVRSDVDHRVSLGERATESLRKHVVELAEEVSRLGNTVLELKGVTQSQKDNVEQVLVDSKRNRCAV 211
            MEDRIKLEVQT+VR DVD RVSL ERA E++R+ V  LAEEV+ LG  V      T +    +EQ+    +R R  V
Sbjct:    1 MEDRIKLEVQTVVRRDVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHATALEQLQASQQRTRSTV 77
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46355.11727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHW6_ECTSI8.310e-1051.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46355contigH-elongata_contig46355:2774..4048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46355.11727.1mRNA_H-elongata_contig46355.11727.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46355 2774..4051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46355.11727.1 ID=prot_H-elongata_contig46355.11727.1|Name=mRNA_H-elongata_contig46355.11727.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp
MTPEIESGWEANIARLIEKANDTLAGSTKSRSSRNYYYSNSRGGSGRSDV
GASPSSSKRVSFPLSSAPRLSRGDRSASYRVGTGGWETSLFDNHSQVPLH
HPDGFQSSLPPAAARVGSFSRSAEVRVNDARIAGMEDRIKLEVQTLVRSD
VDHRVSLGERATESLRKHVVELAEEVSRLGNTVLELKGVTQSQKDNVEQV
LVDSKRNRCAV
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