prot_H-elongata_contig4635.11726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4635.11726.1
Unique Nameprot_H-elongata_contig4635.11726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length410
Homology
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.840e-97
Identity = 230/468 (49.15%), Postives = 264/468 (56.41%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKDRELFGGAGSGLS----------------------------------------------------SPXXXXXXXXXXXXXXXXXXXRHPREGNENLDGYKDAVAKSGDTV--------------QGAWEEDGHWYRHGQASEGLYFTGGEGGKSSSSCISSKYTIHEDKLTVDSPCQMFVTSEGQWVDSIVLAIEARAE-----IAAADAGQ----RSTRLKVAYFEVGAEKETVVGGVEASALRLVAGEGGAWPPXXXXXXXXXXXXXXXXXXXDENTGLGGWQTVSVRLVDEAAEAEARRLKIEAKKERKRVRNDKADREKMLLDAMDADDAMGSYDPWGTGKYKGIDIKSEEFRGHDEVGSAAGAEGKEAGGSVAFKKRKGAGNREK 393
            MASYWVSQERYFCKYCKVWLS HQASIRNHDQGKKH  IV EFFRKKRE+KLKGA SESDLKR+M++I+KAA  AHEKD  +FGGAG+G                                                        XXX XXXXXXXXXXXXXXX  P  GN ++    D  ++ G                  G +EE G WY  GQ                         IH DKL VD+ CQ F+ SEG WVD++VLA+    +      AA DA       + RL +AYFE GAEKETV+ GVEA+A+RL AGEGGAWP       XXXX         DENTGLGGWQTVSVR+VD AAEAEARR+K E K            REKML++AMDADDAMGSYDPWGTGKYKG +I ++  RG +E  +A        G +VAFKKRKG GN+ K
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRA-GDVKSEEGAAAGREGXXXXXXXAAWDGVFEEGGQWYLDGQ-------------------------IHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXX---------DENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEIANDAPRGPEEE-AAGXXXXXXXGPAVAFKKRKGPGNKGK 432          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.720e-33
Identity = 147/436 (33.72%), Postives = 210/436 (48.17%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKDRELFGGA---------GSGLSSPXXXXXXXXXXXXXXXXXXXRHPREGNEN-----LDGYKDAVAKSGDTVQGAWEEDGHWYRHGQASEGLYFTGGEGGKSSSSCISSKYTIH----------EDKLTVDSPCQMFVTSEGQWVDSIVLAIEARAE------------IAAA---DAGQRSTRLKVAYFEVGAEKETVVGGVEASALRLVAGE---GGA--WPPXXXXXXXXXXXXXXXXXXXDENTGLGGWQTVSVRLVDEAAEAEARRLKIEAKKERKRVRNDKADREKMLLDAMDADDAMGSYDPWGTGKYKGIDIKSEEFRGHDE-VGSAAGAE-----GKEAGGSVAFKKRK 386
            MA YW S  ++ CK+C VW+  ++ S R H+ G +H+  VEEFF+ +RE K +G+  + +L +E+ +I+KAA    EKD  +F  +                         XXXXXXXX  RHP     +     + G++D V K    V G  E+                TGG    S+++ +  +YT+           E +L   +PCQ++V  +  W ++IV  +E  A             I  A   D G+ +   + A  +   E + V  GV +  +RLV GE   GG    PPXXXXXX             DE+TGLGGWQTVSVR+VDE AE +A    + A+ +R R   D   R +ML +AM+ +DAM SYDP G G YKG+D+K     G    VG   GA      G +  G VAF++R+
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFKTSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRD-VEKEEKEVNGGSED---------------VTGG----SAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREEEAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXXV------------DEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKR-RKEEDAQRRARMLAEAMEGEDAMSSYDPHGRGIYKGMDLKEGGTEGPGAIVGEVGGAALEVDLGGDQAGPVAFRRRR 403          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: M4BW33_HYAAE (Matrin-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW33_HYAAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.290e-16
Identity = 110/416 (26.44%), Postives = 178/416 (42.79%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKD------RELFGGAGSGLSSPXXXXXXXXXXXXXXXXXXXRHPREGNENLDGYKDAVAKSGDTVQGAWEEDG------HWYRHGQASEGLYFTGGEGGKSSSSCISSKYTIHEDKLTVDSPCQMFVTSEGQWVDSIVLAIEARAEIAAADAGQRSTRLKVAYFEVGAE---------KETVVGGVEASALRL-----VAGEGGAWPPXXXXXXXXXXXXXXXXXXXDENTGLGGWQTVSVRLVDEAAEAEARRLK-IEAKKERKRVRNDKADREKMLLD-AMDADDAMGSYDPWGTGKYKGIDIKSEEFRGHDEVGSA-AGAEGKE--AGGSVAFKKR 385
            M  YWVS+ER+ CKYC VW+   + SI++H+QG+KH+  VEE  +  R  K    +++ +++ ++ +I++AA    E+D      +     +G  ++ P                    H  EG        DAV+ +    +  W  +       +        EG+     +G  +    +  +   HE +L   S CQ++V  + QW+D++V   E        +      R  +AY    ++         K      V A  LR+     V  E                         DE TG+G W TV VR +DE+ EA A+R K +EA+  R   R +     + L D +   D+A+G+++PWG G YKG++I S    G D        + GKE  +G +V+FKKR
Sbjct:    1 MVDYWVSRERHCCKYCNVWMPSDKTSIKHHEQGRKHKEKVEEVLKLNRRIKSDTKNAQKEIQNQLQQIEEAAHAKFEQDLVRCNTKAQVSISGETVAPPPPPRRPTQIQAVFCSVG---HRNEG--------DAVSVARLEHRQPWAREALNRSNLNENEEVNEEEGVEEQDDKGVYAVKGIVYLEGKNHETQLDTGSACQIWVEEQEQWLDALV---EQATVHTIPNTELSFRRFTIAYMSPSSQECAKNKDKRKPVTEHNVLADRLRILLPANVTLEAAEKMVERWRNHGAAESPTRTPVVIDETTGMGEWNTVEVRQIDESLEAVAQREKEVEAETAR---RTEVQQCLESLEDLSSQGDNALGAFNPWG-GTYKGVNIDS----GADATAPGHVASSGKEMVSGLNVSFKKR 394          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A836CFV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.890e-13
Identity = 77/249 (30.92%), Postives = 104/249 (41.77%), Query Frame = 0
Query:  197 QWVDSIVLAIEARAEIAAADAGQRSTRLKVAYFEVGAEKETVVGGVEASALRLVAGEGGAWPPXXXXXXXXXXXXXXXXXXX----------------------------------------------------DENTGLGGWQTVSVRLVDEAAEAEARRLKIE----AKKERKRVRNDKADREKMLLDAMDADDAMGSYDPWGTGKYKGIDIK-----SEEFRGHDEVGSAAGAEG-KEAGGSVAFK 383
            +W+D+++L +   A +A  +   R  R KVAYF  GAE ETVV  + +  LR+ AGE   W                                                                         DENTG+G WQTV V    +  E +AR+ K E    AK++R+     +A+R+  L  AM+ADDAMGSYDP GTG+YKG D++     +EE     +   AA  E  K A   VAFK
Sbjct:  336 EWIDALILEV---ALVAVPNTDIRLRRHKVAYFAPGAEHETVVEDIPSDRLRIPAGEDAEWTAPDDAQLINVIIESDELKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPXXXXXXXDENTGIGRWQTVKVTTFSQE-ELDARQAKAEVAKSAKQKRRAXXXXRAERDMELDLAMEADDAMGSYDPLGTGRYKGFDLERGGHDAEEVSAEQKAAIAAALEAEKGAAAPVAFK 580          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.110e-10
Identity = 71/307 (23.13%), Postives = 123/307 (40.07%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKDRELFGGAGSGLSSPXXXXXXXXXXXXXXXXXXXRHPR-----EGNENLDGYKDAVAKSGDTVQGAWEEDGHWYRHGQASEGLYFTGGEGGKSSSSCISSKYTIHEDKLTVDSPCQMFVTSEGQWVDSIVLAIEARAEIAAADAGQRSTRLKVAYFEVGAEKETVVGGVEASALRLVAGEGG----AWPPXXXXXXXXXXXXXXXXXXXDENTGLGGWQTVSVRLVDEA 298
            M  YW S ERYFCKYC +WL     S+R+H++ K+H   ++E  + KR+ K+K    + DLK+++D+I++ A   H +  E   G  S  ++                    R P+     +G  +   Y  AV +  + V    ++D   Y      + ++  G                 HE ++   S CQ++V    +W D++V   +A    +  +        ++ Y +    +      V A  LR++   G     A                      DE+TG+G W TV VR + ++
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTA---HARFAEDMKGKSSKYAN-----------NKAFTSKPFRRPKTKTFSDGTSSWPLYPVAVPEEKEPVDERKKDDLGVY---SVRDQVFLDG---------------KCHEGQIFAQSACQIWVEELEEWRDALV---DAAVRHSVPNTSLSLRHYQITYMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDTTESHGPVDESTGMGEWSTVLVREIPDS 272          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 68.9 bits (167), Expect = 1.090e-9
Identity = 30/79 (37.97%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKD 79
            M+ YWVSQ++++C+YC+++++ ++ S   H+QGKKH+  VE+F R  R    +    E   KRE+++I++AA++ ++KD
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKD 79          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A0M0JW63_9EUKA (C2h2 and c2hc zinc finger protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JW63_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 1.770e-9
Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQ 74
            M  YWVSQ R++C+YC+++++ +++SI  H+ GKKH+ IVE   R  R    +    +SDL++EMDKI++ AL+
Sbjct:    1 MTEYWVSQARHWCEYCRIYIAGNKSSIAFHENGKKHKEIVELSLRDMRMRGRERRIEQSDLQKEMDKIERNALK 74          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A087TIZ2_STEMI (WW domain-binding protein 4 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TIZ2_STEMI)

HSP 1 Score: 69.3 bits (168), Expect = 1.790e-9
Identity = 35/85 (41.18%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKDRELFGG 85
            M+ YW S  R FC+ CK W + ++ASI  H++GK+H+  V++   + +++ LK    + +L+ EMDKI+KAAL+A+EKD +   G
Sbjct:    1 MSEYWKSLPRKFCETCKCWFADNKASIEFHERGKRHKENVQKRIHEIQKKGLKEYKKQKELEDEMDKIEKAALEAYEKDLQRSSG 85          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A2C9L3S8_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L3S8_BIOGL)

HSP 1 Score: 69.3 bits (168), Expect = 1.810e-9
Identity = 32/79 (40.51%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKD 79
            M+ YW S  R FC +CK W++ ++ S+  H++GK+HQ  VE   ++ R++ L+ ++ +  LK++MDK++KAAL+A +KD
Sbjct:    1 MSEYWKSVPRKFCDFCKCWITDNKPSVDFHERGKRHQENVELRLKEVRKKSLQKSADDEQLKKDMDKMEKAALEAFKKD 79          
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Match: A0A7S1GZF4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZF4_HEMAN)

HSP 1 Score: 63.9 bits (154), Expect = 6.680e-9
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREEKLKGASSESDLKREMDKIQKAALQAHEKDRE 81
            M  YWVSQ RY+CK+C+ WLS  +A+   HD G +H+  VE++ +  R+ K +   +  D ++EM  I +AA +  + D E
Sbjct:   26 MTEYWVSQARYWCKFCQCWLSDTKAARSKHDNGNRHKQSVEDWMKDNRKRKREERIANEDFEKEMRDIDRAAREQFKADVE 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4635.11726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE3.840e-9749.15Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA2.720e-3333.72U1-type domain-containing protein n=2 Tax=Monodops... [more]
M4BW33_HYAAE3.290e-1626.44Matrin-type domain-containing protein n=1 Tax=Hyal... [more]
A0A836CFV0_9STRA3.890e-1330.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0WHY0_9STRA2.110e-1023.13Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A397TAV1_9GLOM1.090e-937.97Matrin-type domain-containing protein n=1 Tax=Glom... [more]
A0A0M0JW63_9EUKA1.770e-943.24C2h2 and c2hc zinc finger protein n=1 Tax=Chrysoch... [more]
A0A087TIZ2_STEMI1.790e-941.18WW domain-binding protein 4 (Fragment) n=1 Tax=Ste... [more]
A0A2C9L3S8_BIOGL1.810e-940.51Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A7S1GZF4_HEMAN6.680e-938.27Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..323
NoneNo IPR availableGENE3D3.30.160.60coord: 9..62
e-value: 1.2E-8
score: 37.0
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..43
e-value: 4.3E-6
score: 36.2
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 9..43
e-value: 7.1E-10
score: 38.5
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 1..109
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.358
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4635contigH-elongata_contig4635:2877..8334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4635.11726.1mRNA_H-elongata_contig4635.11726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4635 2877..8360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4635.11726.1 ID=prot_H-elongata_contig4635.11726.1|Name=mRNA_H-elongata_contig4635.11726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp
MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREE
KLKGASSESDLKREMDKIQKAALQAHEKDRELFGGAGSGLSSPPPPPPPP
TPASIPPPPPPPRHPREGNENLDGYKDAVAKSGDTVQGAWEEDGHWYRHG
QASEGLYFTGGEGGKSSSSCISSKYTIHEDKLTVDSPCQMFVTSEGQWVD
SIVLAIEARAEIAAADAGQRSTRLKVAYFEVGAEKETVVGGVEASALRLV
AGEGGAWPPPPEPEAFPPLPPPPPPPSPDENTGLGGWQTVSVRLVDEAAE
AEARRLKIEAKKERKRVRNDKADREKMLLDAMDADDAMGSYDPWGTGKYK
GIDIKSEEFRGHDEVGSAAGAEGKEAGGSVAFKKRKGAGNREKGTLGKND
NADDIDTPNK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR040023WBP4
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf