prot_H-elongata_contig46269.11710.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46269.11710.1
Unique Nameprot_H-elongata_contig46269.11710.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length309
Homology
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 6.910e-82
Identity = 174/319 (54.55%), Postives = 190/319 (59.56%), Query Frame = 0
Query:    1 VLRDSTYKDAHEFFNFVLNEMADSLVAKEKXXXXXXXXXXXXXXXXXASQQNGVHQPQYPDKHHAPAASVGHQNPPQQHRSSPWSKMSSRRGSFGNGTKNGLTVSQAGGGVLQRFGPGAAPKCEKSEDSKSPP-----------SAPSLSGASGGHASGGAVTEGIEEGVRRKGDGSKE----TWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLYR 304
            + R +  +DAHEFFNFVLNEMADS+VA+ K            XXXXX                            P+  RSS WSKMSS +GSFGNG                                                  S +G  GG         G   G RR  DG+ E    TW+HRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVE NSSV+ACLR+FS+TETLTKKNKFFCE+C ALQ EAEK I+LKRLPRVLTLHLKRFKYVESLE+FSKLSHRVVFPLELRTPNMTD  GEAD DGRLYR
Sbjct:  124 LFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR--RSSTWSKMSSFKGSFGNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESAAGVDGGG--------GNARGNRRTSDGANESGGETWVHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRNFSSTETLTKKNKFFCETCYALQ-EAEKKIRLKRLPRVLTLHLKRFKYVESLENFSKLSHRVVFPLELRTPNMTDAAGEADADGRLYR 431          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.700e-57
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 0
Query:  167 KETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLY 303
            K TW+H +FQGVLTN+TKC+CCETV++RDEPF+DL LD+E N SVTACLR+FS  ETLT  NKFFCE+C ALQ EAEK + L+RLPRVLTLHLKRFKY+E +++FSKLSHRVVFPLELR PNM      AD DG LY
Sbjct:  156 KTTWIHDLFQGVLTNETKCICCETVTHRDEPFVDLPLDIEQNCSVTACLRNFSRMETLTGCNKFFCETCCALQ-EAEKRMCLRRLPRVLTLHLKRFKYMEQIQNFSKLSHRVVFPLELRMPNMARDSA-ADADGILY 290          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A3P6R5X0_CYLGO (USP domain-containing protein n=1 Tax=Cylicostephanus goldi TaxID=71465 RepID=A0A3P6R5X0_CYLGO)

HSP 1 Score: 169 bits (428), Expect = 9.310e-48
Identity = 80/140 (57.14%), Postives = 111/140 (79.29%), Query Frame = 0
Query:  169 TWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLYRQVGA 308
            TW+H IFQG LTN+T+CLCCETVS++DE F+DLS+D++ N+S+T CLR FS TETL    K+FCE+C++ +QEA+K +++KRLP +L LHLKRFKY++ L  ++KLS+RV+FPLELR  N++D   +A +  RLY  V A
Sbjct:   14 TWIHEIFQGTLTNETRCLCCETVSSKDEDFLDLSVDIDQNASITHCLRVFSETETLCGDQKYFCETCSS-KQEAQKRMRIKRLPHMLALHLKRFKYMDQLSRYTKLSYRVLFPLELRLFNVSD---DASNGDRLYDLVAA 149          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A7S4DHD4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHD4_HETAK)

HSP 1 Score: 168 bits (426), Expect = 1.430e-47
Identity = 81/141 (57.45%), Postives = 107/141 (75.89%), Query Frame = 0
Query:  164 DGSKETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLYR 304
            +G   TW+H +F+G LTN+T+CLCCE+V+ RDEPF DLSL++  ++SV ACL  FS+TE L+  NKF+C++C+ LQ EAEK +++KRLPRVL LHLKRFKYVE L+ F+KLS +V FP EL+ PN T    E D D  LY+
Sbjct:   68 EGPVRTWVHELFEGTLTNETRCLCCESVTERDEPFFDLSLEIAQHTSVLACLNKFSSTEVLSHANKFYCDTCHTLQ-EAEKRMKVKRLPRVLVLHLKRFKYVERLQRFAKLSCQVNFPTELKIPNTTKDSQE-DADNTLYK 206          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A7S0JC62_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC62_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 2.070e-47
Identity = 76/136 (55.88%), Postives = 111/136 (81.62%), Query Frame = 0
Query:  168 ETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLY 303
            +TW+H IF+GVLT++T+C+CCE+++ RDE F+DLSL++E NSSV+AC+R+FS++E L  +NKFFC++C +LQ EA++++++KRLP VL LHLKRFKY+ESL+ F KLSHR+ FPLEL+  N  +     +D  R+Y
Sbjct:    3 KTWIHSIFEGVLTSETRCMCCESLTTRDERFLDLSLEIEQNSSVSACMRNFSSSEALRGENKFFCDTCCSLQ-EAKRSMRIKRLPNVLALHLKRFKYIESLQRFKKLSHRISFPLELKVTNTAES---TEDPDRVY 134          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A168NEA7_MUCCL (USP domain-containing protein (Fragment) n=1 Tax=Mucor lusitanicus CBS 277.49 TaxID=747725 RepID=A0A168NEA7_MUCCL)

HSP 1 Score: 169 bits (429), Expect = 5.360e-47
Identity = 84/155 (54.19%), Postives = 115/155 (74.19%), Query Frame = 0
Query:  150 AVTEGIEEG-VRRKGDGSKETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLY 303
            A   G ++G +   G   K TW+H++F+GV +N+TKCL CETV++RDE FMDLS+DVE NSS+T+CLR FS +ETL  KNK+FC+ C+ LQ EAE+ +++K+LP +L LHLKRFKY E L+ + KL++RVVFP ELR  N +D   +AD   R+Y
Sbjct:  101 ADESGSKQGSINSTGQNPKNTWVHQLFEGVFSNETKCLSCETVTSRDECFMDLSIDVEMNSSITSCLRQFSASETLCHKNKYFCDVCSGLQ-EAERRMKIKKLPNILALHLKRFKYQEQLQKYIKLTYRVVFPFELRLFNTSDDTEDAD---RMY 251          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A2G8KWC2_STIJA (Putative ubiquitin carboxyl-terminal hydrolase 12 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KWC2_STIJA)

HSP 1 Score: 171 bits (432), Expect = 5.660e-47
Identity = 82/141 (58.16%), Postives = 112/141 (79.43%), Query Frame = 0
Query:  166 SKETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLYRQV 306
            ++ TW+H IFQG LTN+T+CLCCE VS RDE F+DLS+DVE N+S+T CLR FSNTETL+++ K++CE+C + +QEA+K +Q+K+LP +L LHLKRFK+VE  + ++KLS+RVVFPLELR  N +DG   A+   +LY  V
Sbjct:  156 TEPTWVHDIFQGTLTNETRCLCCEGVSTRDEDFLDLSVDVEQNTSITHCLREFSNTETLSQECKYYCENCCS-KQEAQKRMQVKKLPMILALHLKRFKFVEQYQRYTKLSYRVVFPLELRLLNTSDG---AESSDKLYDLV 292          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A067QHM1_9AGAM (USP domain-containing protein (Fragment) n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067QHM1_9AGAM)

HSP 1 Score: 167 bits (424), Expect = 9.650e-47
Identity = 84/154 (54.55%), Postives = 116/154 (75.32%), Query Frame = 0
Query:  151 VTEGIEEGVRRK-GDGSKETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLY 303
            + E +E+  R   G+G+  T +HR+F+G+LT++T+CL CETVS+RDE F+DLS+D+E NSSVTACLR FS +E L ++NKFFC+SC  LQ EAEK +++K+LP +L LHLKRFKY E ++ + KL++RV FP ELR  N  D   +A+D  RLY
Sbjct:   62 IVEEMEDDRRNAVGNGNDATIVHRLFEGILTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQRNKFFCDSCCGLQ-EAEKRMKIKKLPNILALHLKRFKYQEDVQKYIKLAYRVAFPFELRLFNTVD---DAEDRDRLY 211          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: O88348_MOUSE (Deubiquitinating enzyme (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=O88348_MOUSE)

HSP 1 Score: 164 bits (415), Expect = 1.170e-46
Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 0
Query:  156 EEGVRRKGDGSKE--------TWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLYRQV 306
            + G  R GD   E        TW+H IFQG LTN+T+CL CET+S++DE F+DLS+DVE N+S+T CLR FSNTETL  + K++CE C + +QEA K +++K+LP +L LHLKRFKY++ L  ++KLS+RVVFPLELR  N +   G+A +  R+Y  V
Sbjct:    3 QNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRS-KQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTS---GDATNPDRMYDLV 157          
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Match: A0A4P9XKD2_9FUNG (USP domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XKD2_9FUNG)

HSP 1 Score: 169 bits (429), Expect = 1.430e-46
Identity = 83/135 (61.48%), Postives = 109/135 (80.74%), Query Frame = 0
Query:  169 TWLHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKRLPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDGRLY 303
            TW+H++F+GVLTN+TKCL CETV++RDE F+DLS+D+E +SSVT+CLR FS +E L  KNKF+C++C  LQ EAEK +++K+LPRVL LHLKRFKY E L+ + KLS+RVVFP+ELR  N +D    A+D  RLY
Sbjct:  152 TWVHQLFEGVLTNETKCLTCETVTSRDESFLDLSIDIERHSSVTSCLRQFSASEMLCHKNKFYCDTCCGLQ-EAEKRMKIKKLPRVLALHLKRFKYQERLQRYIKLSYRVVFPMELRLFNTSDA---AEDPDRLY 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46269.11710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBJ3_ECTSI6.910e-8254.55Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A835Z200_9STRA7.700e-5771.53Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A3P6R5X0_CYLGO9.310e-4857.14USP domain-containing protein n=1 Tax=Cylicostepha... [more]
A0A7S4DHD4_HETAK1.430e-4757.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0JC62_9EUKA2.070e-4755.88Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A168NEA7_MUCCL5.360e-4754.19USP domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A2G8KWC2_STIJA5.660e-4758.16Putative ubiquitin carboxyl-terminal hydrolase 12 ... [more]
A0A067QHM1_9AGAM9.650e-4754.55USP domain-containing protein (Fragment) n=1 Tax=J... [more]
O88348_MOUSE1.170e-4652.20Deubiquitinating enzyme (Fragment) n=1 Tax=Mus mus... [more]
A0A4P9XKD2_9FUNG1.430e-4661.48USP domain-containing protein (Fragment) n=1 Tax=T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..52
NoneNo IPR availableGENE3D3.90.70.10coord: 141..308
e-value: 1.3E-47
score: 164.4
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 139..291
NoneNo IPR availablePANTHERPTHR24006:SF756coord: 139..291
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 7..301
e-value: 5.8E-14
score: 52.2
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..308
score: 26.642
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 8..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46269contigH-elongata_contig46269:512..4302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46269.11710.1mRNA_H-elongata_contig46269.11710.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46269 512..4302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46269.11710.1 ID=prot_H-elongata_contig46269.11710.1|Name=mRNA_H-elongata_contig46269.11710.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=309bp
VLRDSTYKDAHEFFNFVLNEMADSLVAKEKKKQQEAREHEEQRNNKSASQ
QNGVHQPQYPDKHHAPAASVGHQNPPQQHRSSPWSKMSSRRGSFGNGTKN
GLTVSQAGGGVLQRFGPGAAPKCEKSEDSKSPPSAPSLSGASGGHASGGA
VTEGIEEGVRRKGDGSKETWLHRIFQGVLTNQTKCLCCETVSNRDEPFMD
LSLDVEPNSSVTACLRSFSNTETLTKKNKFFCESCNALQQEAEKTIQLKR
LPRVLTLHLKRFKYVESLESFSKLSHRVVFPLELRTPNMTDGQGEADDDG
RLYRQVGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf