prot_H-elongata_contig46208.11704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46208.11704.1
Unique Nameprot_H-elongata_contig46208.11704.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length249
Homology
BLAST of mRNA_H-elongata_contig46208.11704.1 vs. uniprot
Match: D7FRP4_ECTSI (Similar to Iron-containing Alcohol Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP4_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.330e-17
Identity = 69/170 (40.59%), Postives = 86/170 (50.59%), Query Frame = 0
Query:  105 DRACAALLKYRRVAGFLVDR----SSDKGEKEKKKNGSAPVPAPEDIVGWLEARLLDKNVPPLYLAGLRLEHATAVVDTMSN---------ELGEN--------LGQDIVRAIVVGESTRQRRDGDDYSASRDPGEGGVGA------TDRLEDSMGGLPARKTQTGPWNK 247
            DRACA LLKY+RVAGF++      SSD G +    N  A  P+PEDIV WL+ RLLDKNV PLY   LR EH   V++T+ +         + GE         LG+  VR+IV GE+ R R  G      R+    G+ A      +    D  G L     QTGPW K
Sbjct:  441 DRACAVLLKYQRVAGFVLGAGEQDSSDTGRRRAGTNPGA-APSPEDIVEWLDERLLDKNVAPLYRTSLRPEHVQPVLETLLSGXXXXXXXRDGGEKAALLAFGGLGEAAVRSIVAGEAGR-RDAGSSSGGEREKEVKGLSAEAAAVVSSMSGDGEGPLGREAPQTGPWQK 608          
BLAST of mRNA_H-elongata_contig46208.11704.1 vs. uniprot
Match: A0A6H5JQN5_9PHAE (Fe-ADH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN5_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.850e-17
Identity = 67/169 (39.64%), Postives = 89/169 (52.66%), Query Frame = 0
Query:  105 DRACAALLKYRRVAGFLVDRSS-DKGEKEKKKNGSAP--VPAPEDIVGWLEARLLDKNVPPLYLAGLRLEHATAVVDTM---------SNELGEN--------LGQDIVRAIVVGESTRQRRDGDDYSASRDPGEGGVGA-----TDRLEDSMGGLPARKT-QTGPWNK 247
            DRACA LLKY+RVAGF++     D G   +++ G+ P   P+PEDIV WL+ RLLDKNV PLY  GLR EH   V++T+         +++ GE         LG+  VR+IV GE+   R  G      ++    GV A        +     G P R+  QTGPW K
Sbjct:  297 DRACAVLLKYQRVAGFVLGAGEQDGGGTGRRRAGTNPGAAPSPEDIVEWLDERLLDKNVAPLYRTGLRPEHVQPVLETLLSGGXXXDGNHDGGEKAALLAFGVLGEAAVRSIVAGEACT-RDAGSSRGGEQEKQVEGVSAEAAAVVSSISGDGEGPPGREAPQTGPWQK 464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46208.11704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRP4_ECTSI1.330e-1740.59Similar to Iron-containing Alcohol Dehydrogenase n... [more]
A0A6H5JQN5_9PHAE1.850e-1739.64Fe-ADH domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46208contigH-elongata_contig46208:1476..2222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46208.11704.1mRNA_H-elongata_contig46208.11704.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46208 1476..3052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46208.11704.1 ID=prot_H-elongata_contig46208.11704.1|Name=mRNA_H-elongata_contig46208.11704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
MPERFPVAPKISNLRRDQEAFADRSPRRRRRRRRAQDTPANPKPVASPVR
GTSQDASDRTSQKVSGDKEGGSDRGSEKSSSGAGSSDADVDGSVDGDDNA
DDRYDRACAALLKYRRVAGFLVDRSSDKGEKEKKKNGSAPVPAPEDIVGW
LEARLLDKNVPPLYLAGLRLEHATAVVDTMSNELGENLGQDIVRAIVVGE
STRQRRDGDDYSASRDPGEGGVGATDRLEDSMGGLPARKTQTGPWNKP*
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