prot_H-elongata_contig46206.11703.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 3.610e-7 Identity = 51/181 (28.18%), Postives = 82/181 (45.30%), Query Frame = 0
Query: 48 ADSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDALMRVYPATALIHPRRGGKPPFSRPLPPENGLVEIKVRRQVAARSRLPKPPTATALAA-TQRGPR-----DIMKLHQVLGYPAEQIARNTARMSGVQLSGIWRPCVHCSESRVRRYAVPKSTENQTDRRAGRLFIDLSGPFHETSLG 222
ADS + LK+V + PNLG +NL S +F + G+ F +G++ +A+ RL + T LAA T P+ DI + H + + E + R TA+ G +L G C CS S+ R + + T+ ++D++ GR+F+DL G S+G
Sbjct: 41 ADSEFSVELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFNGQVTFQN----FDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVG 207
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 4.770e-6 Identity = 34/107 (31.78%), Postives = 55/107 (51.40%), Query Frame = 0
Query: 122 VAARSRLPKPPTATALAA-TQRGPR-----DIMKLHQVLGYPAEQIARNTARMSGVQLSGIWRPCVHCSESRVRRYAVPKSTENQTDRRAGRLFIDLSGPFHETSLG 222
+A+ RL + T LAA T P+ DI + H + + E + R TA+ G +L G C CS S+ R + + T+ ++D++ GR+F+DL G S+G
Sbjct: 223 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVG 329
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 5.660e-6 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 146 DIMKLHQVLGYPAEQIARNTARMSGVQLSGIWRPCVHCSESRVRRYAVPKSTENQTDRRAGRLFIDLSGPFHETSLG 222
D+ H + G+ E + R TA+ G++L+G C CS + R A+ T N +D++ GR+F++L G S+G
Sbjct: 392 DVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIG 468
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.760e-5 Identity = 23/77 (29.87%), Postives = 43/77 (55.84%), Query Frame = 0
Query: 146 DIMKLHQVLGYPAEQIARNTARMSGVQLSGIWRPCVHCSESRVRRYAVPKSTENQTDRRAGRLFIDLSGPFHETSLG 222
D+ + H + + E + R TA+ G++L+G C CS S+ + + T+ ++D++ GR+F+DL G S+G
Sbjct: 571 DVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVG 647
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.850e-5 Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 0
Query: 122 VAARSRLPKPPTATALAA-TQRGPR-----DIMKLHQVLGYPAEQIARNTARMSGVQLSGIWRPCVHCSESRVRRYAVPKSTENQTDRRAGRLFIDLSGPFHETSLG 222
+A+ RL + T LAA T P+ DI + H + + E + R TA+ G +L G C CS S+ R + T+ ++D++ GR+F+DL G S+G
Sbjct: 156 IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVG 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46206.11703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig46206.11703.1 ID=prot_H-elongata_contig46206.11703.1|Name=mRNA_H-elongata_contig46206.11703.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bpback to top |