prot_H-elongata_contig46149.11697.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46149.11697.1
Unique Nameprot_H-elongata_contig46149.11697.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
[Close]
BLAST of mRNA_H-elongata_contig46149.11697.1 vs. uniprot
Match: D7FLD7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD7_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 6.300e-31
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0 
Query:    1 SDEFALCYYKNKTDFEVRGWIYLKDIAKISEDYDTIILTSAARTLHLYAQTRAEHNSWVTGLAKLCPDAFIKLGRE----RLRDDIRNIS 86
            S+E ALCYYK     E+RGWIYLKD+ +I+ED DTII+TSAARTLHLYAQTRA+HN WVTGLAKLCP AF  LGR     R+ +D+R  S
Sbjct:   41 SEELALCYYKKFNVPEIRGWIYLKDVTEIAEDQDTIIVTSAARTLHLYAQTRAQHNLWVTGLAKLCPHAFAILGRNASVRRMENDLRMTS 130
[Close]
BLAST of mRNA_H-elongata_contig46149.11697.1 vs. uniprot
Match: A0A6H5JEF7_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF7_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.240e-30
Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:    1 SDEFALCYYKNKTDFEVRGWIYLKDIAKISEDYDTIILTSAARTLHLYAQTRAEHNSWVTGLAKLCPDAFIKLGRE----RLRDDIRNIS 86
            S+E ALCYYK     E+RGWIYLKD+ +I+ED DTII+TSAARTLHLYAQTRA+HN WVTGL KLCP AF  LGR     R+ +D+R  S
Sbjct:   41 SEELALCYYKKFNVPEIRGWIYLKDVTEIAEDQDTIIVTSAARTLHLYAQTRAQHNLWVTGLVKLCPHAFAMLGRNASVRRMENDLRMTS 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46149.11697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLD7_ECTSI6.300e-3166.67PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JEF7_9PHAE1.240e-3065.56PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 2..69
e-value: 5.5E-9
score: 37.8
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46149contigH-elongata_contig46149:3983..4240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46149.11697.1mRNA_H-elongata_contig46149.11697.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46149 3983..4240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46149.11697.1 ID=prot_H-elongata_contig46149.11697.1|Name=mRNA_H-elongata_contig46149.11697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
SDEFALCYYKNKTDFEVRGWIYLKDIAKISEDYDTIILTSAARTLHLYAQ
TRAEHNSWVTGLAKLCPDAFIKLGRERLRDDIRNIS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf