prot_H-elongata_contig46088.11686.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46088.11686.1
Unique Nameprot_H-elongata_contig46088.11686.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: D8LNK8_ECTSI (Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK8_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 3.650e-77
Identity = 114/139 (82.01%), Postives = 127/139 (91.37%), Query Frame = 0
Query:    1 SPADKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRGEDHLPLPGVR 139
            SP D ++V + L DA+PT IH LMF PNVEALCTE QR++WLPRC + EVIGCYAQTELGHGSNIRALET ATF+RETDEFEIH+PSITATKWWPGT+GRTANHAMVIAQLVIDGK+YGIHNFIVP+RG+DHLPLPGVR
Sbjct:   70 SPEDAELVSDSLNDAMPTYIHALMFRPNVEALCTEQQRQFWLPRCDSMEVIGCYAQTELGHGSNIRALETTATFVRETDEFEIHSPSITATKWWPGTMGRTANHAMVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVR 208          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A6H5K1J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J8_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.330e-75
Identity = 113/142 (79.58%), Postives = 124/142 (87.32%), Query Frame = 0
Query:    1 SPADKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMV---IAQLVIDGKEYGIHNFIVPLRGEDHLPLPGVR 139
            S  D  +V + L DA+PT IH LMF PNVEALCTE QR+ WLPRC + EVIGCYAQTELGHGSNIRALET ATF+RETDEFEIH+PSITATKWWPGT+GRTANHAMV   IAQLVIDGK+YGIHNFIVP+RG+DHLPLPGVR
Sbjct:   88 SSEDAGLVSDSLNDAMPTYIHALMFRPNVEALCTEQQRQVWLPRCDSMEVIGCYAQTELGHGSNIRALETTATFVRETDEFEIHSPSITATKWWPGTMGRTANHAMVRVVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVR 229          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A7S1TVA0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVA0_9STRA)

HSP 1 Score: 196 bits (498), Expect = 9.490e-61
Identity = 87/137 (63.50%), Postives = 111/137 (81.02%), Query Frame = 0
Query:    3 ADKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRGED-HLPLPGV 138
            A+    +E L D LPT++HP+MFVPN+  LCTEAQ+ YWLP+ R+ EV+GCYAQTELGHGSN+RAL+T AT++RE D F IHTP++ A KWWPG+LGRTAN AMVIA+L+IDG ++G+ NF+VP+R  D H  LPGV
Sbjct:   48 AEWRAAVEALADDLPTLLHPIMFVPNIRMLCTEAQQAYWLPKARSLEVVGCYAQTELGHGSNVRALQTTATYVREDDAFVIHTPTLAAVKWWPGSLGRTANTAMVIARLIIDGADHGVQNFLVPIRDRDTHAALPGV 184          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A835YNL1_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.360e-60
Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 0
Query:    4 DKDIVLEC-LCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRG-EDHLPLPGVR 139
            D+D++L   + + LPT++H LMF+PN+ ALCT+AQ+  WLPRC + EVIGCYAQTELGHGSNIRALET ATF+ +TDEFEIH+P++TATKWWPGTLGRTANHAMVIAQLVI  + YGIHNFIVPLR  + H PL GVR
Sbjct:   84 DEDLLLSAAINETLPTLLHYLMFMPNIRALCTDAQQAAWLPRCESLEVIGCYAQTELGHGSNIRALETTATFLPDTDEFEIHSPTLTATKWWPGTLGRTANHAMVIAQLVIGDRRYGIHNFIVPLRDVKAHAPLRGVR 221          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A8J9TIA5_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TIA5_PHATR)

HSP 1 Score: 171 bits (434), Expect = 4.120e-51
Identity = 85/144 (59.03%), Postives = 109/144 (75.69%), Query Frame = 0
Query:    4 DKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDE------FEIHTPSITATKWWPGTLGRTANHAMVIAQLVID-GKEYGIHNFIVPLRG-EDHLPLPGVR 139
            D  ++L  L D LPT +H +MFVPN+ +LC E Q+R WLP CR  ++IGCYAQTELGHGSN+RALET ATF+ E  +      F I++P+IT+ K+WPGTLGRTANHAMVIA+L+   GK+ G+HNF+VPLR  +DH  LPGV+
Sbjct:   96 DFPVLLAALADDLPTALHWIMFVPNIVSLCDEEQQRAWLPLCRDWKMIGCYAQTELGHGSNVRALETTATFVSEDQDGTKGGSFVINSPTITSAKFWPGTLGRTANHAMVIARLIDGHGKDQGMHNFLVPLRSMKDHKLLPGVK 239          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A7S3Y646_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y646_HETAK)

HSP 1 Score: 170 bits (430), Expect = 6.120e-49
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    1 SPADKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRG-EDHLPLPGV 138
            S  +  ++ E + ++   ++H LMF+P V+AL T+ QR  W  R    +++GCYAQTELGHGSNIRALET ATF  ETDEF +H+P+ITA KWWPG LG+   HAMVIA+LV  GK+YGIHNFIVP+R  E H+PLPGV
Sbjct:   11 SSEEHAVLYEAIGESSALLLHRLMFIPIVKALFTDEQREEWDSRMENLDILGCYAQTELGHGSNIRALETTATFDPETDEFILHSPTITARKWWPGGLGKVGTHAMVIARLVTGGKDYGIHNFIVPIRDPETHMPLPGV 149          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A2K8DRF5_PROMN (Acyl-coenzyme A oxidase (Fragment) n=1 Tax=Prorocentrum minimum TaxID=39449 RepID=A0A2K8DRF5_PROMN)

HSP 1 Score: 175 bits (443), Expect = 1.040e-48
Identity = 78/126 (61.90%), Postives = 102/126 (80.95%), Query Frame = 0
Query:   14 DALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRG-EDHLPLPGV 138
            D L T +  LMF+PN+ A  +E Q+ +WLPR  + EV+GCYAQTELGHGSN+RALET AT++ E+DEFEIH+P+ T+TKWWPG LGRTANHA+V A+L++DG++ GIHNF+V +R  E H PLPG+
Sbjct:  114 DQLGTDLQDLMFLPNIRATFSEEQQAHWLPRAESWEVLGCYAQTELGHGSNVRALETTATYLPESDEFEIHSPTTTSTKWWPGALGRTANHAIVYARLILDGRDIGIHNFMVQIRDLETHRPLPGI 239          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A812ZGE5_9DINO (Acyl-coenzyme A oxidase n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZGE5_9DINO)

HSP 1 Score: 174 bits (441), Expect = 1.510e-48
Identity = 78/127 (61.42%), Postives = 100/127 (78.74%), Query Frame = 0
Query:   14 DALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRG-EDHLPLPGVR 139
            D L T +  LMF+PN+ A  ++ QR +WLPR    EV+GCYAQTELGHGSN+R LET AT++ ETDE EIH+PS+T+TKWWPG LGRTANHA+V A+L++ GK+ GIHNF+V +R  + H PLPGV+
Sbjct:   97 DDLGTDLQTLMFIPNIRATFSDEQRAHWLPRAEAWEVVGCYAQTELGHGSNVRGLETTATYLEETDEIEIHSPSLTSTKWWPGALGRTANHAVVYARLIVAGKDLGIHNFMVQIRDLQTHEPLPGVQ 223          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: A0A812JGZ4_SYMPI (ACX1 protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JGZ4_SYMPI)

HSP 1 Score: 170 bits (431), Expect = 3.380e-48
Identity = 75/127 (59.06%), Postives = 99/127 (77.95%), Query Frame = 0
Query:   14 DALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVIDGKEYGIHNFIVPLRG-EDHLPLPGVR 139
            D L T +  LMF+PN+ A  ++ QR +WLPR    EV+GCYAQTELGHGSN+R LET AT++ + DE EIH+P++T+TKWWPG LGRTANHA+V A+L++ GK+ GIHNF+V +R  + H PLPGV+
Sbjct:   63 DDLGTDLQTLMFIPNIRATFSDEQRAHWLPRAEAWEVVGCYAQTELGHGSNVRGLETTATYVEDADEIEIHSPTLTSTKWWPGALGRTANHAVVYARLIVKGKDLGIHNFMVQIRDMKTHEPLPGVQ 189          
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Match: B8CA48_THAPS (Acyl-coa oxidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA48_THAPS)

HSP 1 Score: 173 bits (439), Expect = 3.720e-48
Identity = 81/127 (63.78%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   14 DALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEVIGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGRTANHAMVIAQLVI-DGKEYGIHNFIVPLRG-EDHLPLPGV 138
            D +PT +H +MFVPN+  LC   Q+  WLP CR  ++IGCYAQTELGHGSNIRALET ATF++E++E+ IH+P++T+TK+WPGTLG+TANHAMVIA+L+   G++ GIHNF+VPLR  EDH  LPGV
Sbjct:   99 DPMPTSLHWVMFVPNIMTLCDAQQQALWLPLCRDWKMIGCYAQTELGHGSNIRALETTATFLKESEEWIIHSPTLTSTKFWPGTLGKTANHAMVIARLIDGSGRDRGIHNFVVPLRSMEDHTLLPGV 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46088.11686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK8_ECTSI3.650e-7782.01Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ecto... [more]
A0A6H5K1J8_9PHAE1.330e-7579.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TVA0_9STRA9.490e-6163.50Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A835YNL1_9STRA1.360e-6071.01Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus Ta... [more]
A0A8J9TIA5_PHATR4.120e-5159.03Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S3Y646_HETAK6.120e-4958.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2K8DRF5_PROMN1.040e-4861.90Acyl-coenzyme A oxidase (Fragment) n=1 Tax=Proroce... [more]
A0A812ZGE5_9DINO1.510e-4861.42Acyl-coenzyme A oxidase n=1 Tax=Symbiodinium sp. C... [more]
A0A812JGZ4_SYMPI3.380e-4859.06ACX1 protein (Fragment) n=1 Tax=Symbiodinium pilos... [more]
B8CA48_THAPS3.720e-4863.78Acyl-coa oxidase (Fragment) n=1 Tax=Thalassiosira ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.110.10coord: 52..139
e-value: 4.9E-37
score: 129.0
NoneNo IPR availablePANTHERPTHR10909ELECTRON TRANSPORT OXIDOREDUCTASEcoord: 16..138
NoneNo IPR availablePANTHERPTHR10909:SF250PEROXISOMAL ACYL-COENZYME A OXIDASE 1coord: 16..138
IPR037069Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyGENE3D1.10.540.10coord: 1..51
e-value: 3.0E-9
score: 39.1
IPR029320Acyl-coenzyme A oxidase, N-terminalPFAMPF14749Acyl-CoA_ox_Ncoord: 9..51
e-value: 3.2E-9
score: 37.4
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 14..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46088contigH-elongata_contig46088:1956..3778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46088.11686.1mRNA_H-elongata_contig46088.11686.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46088 1956..3778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46088.11686.1 ID=prot_H-elongata_contig46088.11686.1|Name=mRNA_H-elongata_contig46088.11686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
SPADKDIVLECLCDALPTMIHPLMFVPNVEALCTEAQRRYWLPRCRTHEV
IGCYAQTELGHGSNIRALETKATFIRETDEFEIHTPSITATKWWPGTLGR
TANHAMVIAQLVIDGKEYGIHNFIVPLRGEDHLPLPGVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037069AcylCoA_DH/ox_N_sf
IPR029320Acyl-CoA_ox_N
IPR009100AcylCoA_DH/oxidase_NM_dom