prot_H-elongata_contig45608.11637.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45608.11637.1
Unique Nameprot_H-elongata_contig45608.11637.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 8.920e-93
Identity = 128/158 (81.01%), Postives = 146/158 (92.41%), Query Frame = 0
Query:    1 MSMRYSRVATGDDVSPVTEAEQSKRRRSELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 158
            MS+RYSRV +GD  SP TEAEQSKRRRS+LA+R+SNKLHA  WVVVG+ VV +TDF+RVL+EDERV+R+WFN+G+VCFS+N +ILAYLTVWLPHVRGI+VSWNVY PRAIP ATV+GLICAL LN+SLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC
Sbjct:   82 MSLRYSRVTSGDGGSPATEAEQSKRRRSQLADRISNKLHAFFWVVVGVAVVYRTDFVRVLVEDERVDRLWFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 239          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.980e-69
Identity = 98/159 (61.64%), Postives = 123/159 (77.36%), Query Frame = 0
Query:    1 MSMRYSRVATGDDVSPV-TEAEQSKRRRSELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 158
            MS RYSRV T D  S   T  E+ KRRR+ELAER+SNKLHA  W +V   VV  TDF+RVL++D+RV R WFN+   CF++N +I+ YLT+WLP V+ +   WN+YCPRAIPAAT +G+IC ++LN++LW+VWGFLTPLIL  VF+GCLF LHFVPWPC
Sbjct:    1 MSQRYSRVPTRDVKSTTETSEEERKRRRTELAERISNKLHAAFWTIVAGVVVYYTDFVRVLLQDDRVKRPWFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVPWPC 159          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.740e-45
Identity = 78/164 (47.56%), Postives = 103/164 (62.80%), Query Frame = 0
Query:    2 SMRYSRVATGDDVSPVTEA------EQSKRRRSEL----AERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            S R+   A GD+     E       E+ K+R  E     AE VS K+HA+LW+V   ++    D  RV   D RV+R++FN+G+VCF IN  I  YL VWLP+V+ I + W+VYCPR IP ATV+GL+CAL L + LW VWGF TP ILF +F+G L + HF+P
Sbjct:    7 SYRHLSQAEGDEEKSSVEENVENEIEELKKRMQEKSVSRAEWVSTKIHAVLWIVGAASLAYFLDVFRVAFRDARVHRIYFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.170e-43
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0
Query:   13 DVSPVTEAEQSKRRRS----ELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            D +  TE E+ K+R        AE +S K+HA LW+V    ++   D M V   D RV+RV+FN+G+VCF IN  I  YL +WLP+V+ I + WNVYCPR +P AT++G++CAL   + LW VWGF TP ILF +F+G L + HF+P
Sbjct:   29 DANAETEIEELKKRAQGKPPSRAEVISTKIHAFLWIVGAGFLLYYLDVMHVAFRDSRVHRVYFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLP 175          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: W4FWN3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.500e-43
Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 0
Query:   20 AEQSKRRRSE---LAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            AE  KR + +    AE VS K+HAL+W+V    ++   D +RV   D RV+RV+FN+G+VCF IN  I  YL++WLP+V+ I + W+VYCPR +P ATV+G++CAL   V LW VWGF TP ILF +F+G L + HF+P
Sbjct:   39 AELKKRAQGKPPSRAEVVSTKIHALMWIVGAGFLLYYLDVLRVAFRDARVHRVYFNIGLVCFGINACITLYLSIWLPYVKKIDLEWSVYCPRMVPTATVVGIVCALMFTVGLWPVWGFFTPGILFVLFLGTLMTAHFLP 177          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.720e-43
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:   31 AERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            AE +S KLHALLWV+   ++V   D  RV   D RV+RV+FN+G+VCF IN  I  YL VWLP+++ I + W+VYCPR +P AT +GL+CALT  + LW VWG  TP ILF +F+G L + HF+P
Sbjct:   51 AEWISTKLHALLWVLGAGSLVYTLDVFRVAFRDARVHRVYFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: W7TLQ7_9STRA (Transmembrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLQ7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.620e-42
Identity = 67/135 (49.63%), Postives = 97/135 (71.85%), Query Frame = 0
Query:   23 SKRRRSELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVPWP 157
            SKR R+E+ ER+S KL A  WV+  +  +  T+F+ V+++DER+NRV+F++ ++C  IN+ I  YLTV+L  ++GI + W  YCPR IPAAT  G++CA+ L  SLW V+GF  PLIL  +F G +FS+HF+PWP
Sbjct:   72 SKRERAEIWERISVKLQAGAWVLGMMATLHYTNFVHVVLDDERLNRVYFHLAMICLGINLCIGLYLTVYLQLIKGINIEWATYCPRMIPAATFSGVVCAICLVSSLWPVYGFFAPLILLVIFFGSMFSMHFIPWP 206          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA)

HSP 1 Score: 144 bits (362), Expect = 6.160e-41
Identity = 68/141 (48.23%), Postives = 92/141 (65.25%), Query Frame = 0
Query:   19 EAEQSKRRRS----ELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            E EQ K+R        AE VS KLHA LW+   + +    D + V   D RV+R++FN+G+VCF +N  I  YL VWLP+V+ I + W+VYCPR IP AT++G++CAL   + LW VWGF TP ILF +F+G L + HF+P
Sbjct:   23 EIEQLKKRTQPKPPSKAEYVSTKLHAALWIGSAVALAYCLDVLNVAFHDPRVHRLYFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: A0A7S2JTX7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTX7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.140e-40
Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 0
Query:    5 YSRVATGDDVSPVTEAE------QSKRRRSELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVPW 156
            Y RV T       T+ E      +S  R+   AER+S+K HAL WV++   VV  TDF  V + DE+++R  F + VVC  IN I+  YLTV+LP +  +   W+VYCPR IP  T +G +CA+ L  + + VWGFL+P+IL  VF+G LF LHF+PW
Sbjct:    8 YRRVPTTATTGTATQNETEENDVKSTIRKKTRAERISDKFHALCWVIISGAVVYYTDFFNVFLHDEKIHRPTFLLSVVCLVINTILTLYLTVYLPKIAQVTAPWDVYCPRVIPTMTGIGCLCAVLLIRASYPVWGFLSPIILGIVFLGFLFGLHFIPW 165          
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Match: K3X4N2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4N2_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 1.730e-36
Identity = 59/134 (44.03%), Postives = 88/134 (65.67%), Query Frame = 0
Query:   22 QSKRRRSELAERVSNKLHALLWVVVGITVVVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKVSWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFSLHFVP 155
            + ++ RS+ A   S KLHAL+W+V   +V    DF  V+  D R+N+ +F++G++C  +N+ I AYL V+LP+++ I + W+VYCPR IPAATV+G +    L  + W VWG LTP +L   FIG L + HF+P
Sbjct:   59 KKQKVRSQQAAAWSTKLHALVWIVASASVAYAIDFFHVIFSDPRINKWYFHLGLICMGVNICITAYLAVYLPYIKRIHLEWSVYCPRMIPAATVVGAVATFALVFAFWPVWGLLTPGLLALFFIGSLMTAHFLP 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45608.11637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK7_ECTSI8.920e-9381.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLB2_9STRA1.980e-6961.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0XCK9_9STRA8.740e-4547.56Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UNE8_9STRA1.170e-4347.62Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W4FWN3_9STRA2.500e-4350.36Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A485KKF8_9STRA4.720e-4353.60Aste57867_8441 protein n=1 Tax=Aphanomyces stellat... [more]
W7TLQ7_9STRA1.620e-4249.63Transmembrane protein n=1 Tax=Nannochloropsis gadi... [more]
A0A1W0A176_9STRA6.160e-4148.23Transmembrane protein n=1 Tax=Thraustotheca clavat... [more]
A0A7S2JTX7_9STRA5.140e-4044.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K3X4N2_GLOUD1.730e-3644.03Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033579Transmembrane protein 128PANTHERPTHR31134FAMILY NOT NAMEDcoord: 18..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 35..54
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45608contigH-elongata_contig45608:1872..3628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45608.11637.1mRNA_H-elongata_contig45608.11637.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45608 963..3690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45608.11637.1 ID=prot_H-elongata_contig45608.11637.1|Name=mRNA_H-elongata_contig45608.11637.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
MSMRYSRVATGDDVSPVTEAEQSKRRRSELAERVSNKLHALLWVVVGITV
VVQTDFMRVLMEDERVNRVWFNVGVVCFSINVIILAYLTVWLPHVRGIKV
SWNVYCPRAIPAATVMGLICALTLNVSLWNVWGFLTPLILFAVFIGCLFS
LHFVPWPC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033579TMEM128