prot_H-elongata_contig45543.11632.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45543.11632.1
Unique Nameprot_H-elongata_contig45543.11632.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: D8LLE3_ECTSI (cobW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE3_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 4.550e-65
Identity = 106/115 (92.17%), Postives = 112/115 (97.39%), Query Frame = 0
Query:   23 VPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREA-NVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ 136
            +P+EEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENE+G+VSIDT LVEENVREA ++VTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF Q
Sbjct:   62 LPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTELVEENVREAEDIVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFNQ 176          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A6H5K110_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K110_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.680e-63
Identity = 105/115 (91.30%), Postives = 112/115 (97.39%), Query Frame = 0
Query:   23 VPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREA-NVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ 136
            +P+EEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENE+G+VSIDT LVEENVREA ++VTMDNGCVCCTVRGDLVKAL+NFLDRRDTFDCILLETTGIADPSPIVATF Q
Sbjct:   60 LPEEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEYGAVSIDTDLVEENVREAEDIVTMDNGCVCCTVRGDLVKALVNFLDRRDTFDCILLETTGIADPSPIVATFNQ 174          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A836CCU3_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.000e-48
Identity = 83/113 (73.45%), Postives = 97/113 (85.84%), Query Frame = 0
Query:   23 VPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREA-NVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF 134
            +PDE KTPV ++ G+LGAGKTTLVNYILKEQR++KI VIENEFG+VSID  LV ENVRE+ ++V MDNGCVCCTVRGDLVK LL F  ++  FD ILLETTG+ADPSPIV+TF
Sbjct:   53 IPDEVKTPVVILLGYLGAGKTTLVNYILKEQRDLKICVIENEFGAVSIDDDLVSENVRESEDIVVMDNGCVCCTVRGDLVKTLLGFSGKQKVFDFILLETTGLADPSPIVSTF 165          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A7S2D3X1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3X1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 5.910e-47
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 0
Query:   19 DMTNVPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVR-EANVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF 134
            D   VPDEEKTPVTV+TGFLGAGKTTL+NYILKEQ + +IAVIENEFG V+ID  LV EN+  + ++V+MDNGCVCCTVRGDLV+ L + + RR  F  I+LETTG+ADP+PI+ TF
Sbjct:    5 DDAEVPDEEKTPVTVITGFLGAGKTTLLNYILKEQTDWRIAVIENEFGEVNIDEGLVTENLATKEDIVSMDNGCVCCTVRGDLVRTLNSLIVRRKDFHAIMLETTGLADPAPIIQTF 121          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A7S3M4Y2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4Y2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 7.530e-47
Identity = 76/121 (62.81%), Postives = 92/121 (76.03%), Query Frame = 0
Query:   15 DQGDDMTNVPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVR-EANVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF 134
            D  +D   VPD EKTPVT+VTGFLG+GKTTLVNYILKEQ   KI V+ENEFG VSID  LV EN+  + +++ +DNGCVCC+VRGDLV+       RR  FD I++ETTG+ADPSPI+ TF
Sbjct:   13 DDDEDFHEVPDSEKTPVTIVTGFLGSGKTTLVNYILKEQNTWKICVVENEFGEVSIDNDLVRENLAAKEDIIMLDNGCVCCSVRGDLVRTFAMLASRRKDFDAIIIETTGLADPSPIIFTF 133          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A7S4EX41_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EX41_CHRCT)

HSP 1 Score: 166 bits (419), Expect = 3.220e-46
Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 0
Query:   23 VPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREAN-VVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ 136
            +P+EEK P+TVVTGFLGAGKTTLVNYIL EQ + KI VIENEFG+VSID ALV+ENV+ A  ++TMDNGC CCTVRGDLVKA     DRR  FD +LLETTG+ADP+P++ T T 
Sbjct:  103 LPEEEKLPITVVTGFLGAGKTTLVNYILNEQHDKKICVIENEFGAVSIDEALVKENVKAAEELITMDNGCACCTVRGDLVKAFGQLKDRRKNFDLVLLETTGLADPAPVIKTITS 217          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A482SKX7_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKX7_9ARCH)

HSP 1 Score: 162 bits (410), Expect = 1.240e-45
Identity = 78/117 (66.67%), Postives = 91/117 (77.78%), Query Frame = 0
Query:   19 DMTNVPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVR-EANVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF 134
            D   VP+ EKTPVT++TGFLG+GKTTLVNYILKEQ   KI VIENEFG V ID  LVEEN+    +++TMDNGCVCC++RGDLV+       RR  FDCIL+ETTG+ADPSPIV TF
Sbjct:    3 DFEEVPEHEKTPVTIITGFLGSGKTTLVNYILKEQTSWKICVIENEFGEVPIDNDLVEENLAAREDIITMDNGCVCCSIRGDLVRTFSVLASRRKDFDCILIETTGVADPSPIVFTF 119          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A7S2GHV4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHV4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.010e-45
Identity = 77/118 (65.25%), Postives = 94/118 (79.66%), Query Frame = 0
Query:   18 DDMTNVPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVR-EANVVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATF 134
            DD+  VPD EKTPVT+VTGFLG+GKTTLVNYILK Q E +I VIENEFG V+ID  LV EN+  + ++V+MDNGC+CC+VRGDLV+ L   + RR  F  ILLETTG+ADP+PI+ TF
Sbjct:   16 DDLIEVPDSEKTPVTIVTGFLGSGKTTLVNYILKSQNEWRICVIENEFGEVNIDEGLVSENIAAKEDIVSMDNGCICCSVRGDLVRTLNTLISRRRDFQAILLETTGLADPAPIITTF 133          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A7S3SMN6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SMN6_EMIHU)

HSP 1 Score: 162 bits (409), Expect = 3.850e-45
Identity = 79/113 (69.91%), Postives = 95/113 (84.07%), Query Frame = 0
Query:   25 DEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREAN-VVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ 136
            D EK  VTVVTGFLG+GKTTLVNYIL+EQ   +I VIENEFG+V+ID ALV+EN+  A  V++MDNGC CCTVRGDLV+AL    DR+D+FD +LLETTG+ADP+PI+ATFTQ
Sbjct:  117 DSEKLAVTVVTGFLGSGKTTLVNYILREQHGKRICVIENEFGAVNIDEALVKENLSSAEEVISMDNGCACCTVRGDLVRALTQLKDRKDSFDLVLLETTGLADPAPILATFTQ 229          
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Match: A0A0M0JL26_9EUKA (CobW C-terminal domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JL26_9EUKA)

HSP 1 Score: 162 bits (411), Expect = 6.240e-45
Identity = 76/127 (59.84%), Postives = 103/127 (81.10%), Query Frame = 0
Query:   11 GVNDDQGDDMTNVPDEEKTPVTVVTGFLGAGKTTLVNYILKEQREMKIAVIENEFGSVSIDTALVEENVREAN-VVTMDNGCVCCTVRGDLVKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ 136
            G+ D++ + M +VPD +KTPVT++TGFLGAGKTTL+N+IL  +   K+ VIENEFGSV IDTALV+EN+  A  ++++DNGC CCTVRGDL+KAL    +RR  FD +++ETTG+A+P+P+VATFTQ
Sbjct:   79 GIRDEEEEFMEDVPDADKTPVTIITGFLGAGKTTLINHILTNKTGQKVCVIENEFGSVDIDTALVKENLNVAEEIISLDNGCACCTVRGDLLKALSQLKERRHDFDLVIVETTGMANPAPVVATFTQ 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45543.11632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLE3_ECTSI4.550e-6592.17cobW domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K110_9PHAE1.680e-6391.30CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A836CCU3_9STRA8.000e-4873.45CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
A0A7S2D3X1_9STRA5.910e-4767.52Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3M4Y2_9STRA7.530e-4762.81Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4EX41_CHRCT3.220e-4669.57Hypothetical protein n=3 Tax=Chrysotila carterae T... [more]
A0A482SKX7_9ARCH1.240e-4566.67GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A7S2GHV4_9STRA2.010e-4565.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3SMN6_EMIHU3.850e-4569.91Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A0M0JL26_9EUKA6.240e-4559.84CobW C-terminal domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003495CobW/HypB/UreG, nucleotide-binding domainPFAMPF02492cobWcoord: 30..133
e-value: 1.9E-37
score: 128.6
NoneNo IPR availableGENE3D3.40.50.300coord: 26..136
e-value: 2.2E-43
score: 150.4
NoneNo IPR availablePANTHERPTHR13748COBW-RELATEDcoord: 21..135
NoneNo IPR availableTMHMMTMhelixcoord: 31..50
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45543contigH-elongata_contig45543:1230..4204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45543.11632.1mRNA_H-elongata_contig45543.11632.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45543 1230..4204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45543.11632.1 ID=prot_H-elongata_contig45543.11632.1|Name=mRNA_H-elongata_contig45543.11632.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
EDYEDDEDDQGVNDDQGDDMTNVPDEEKTPVTVVTGFLGAGKTTLVNYIL
KEQREMKIAVIENEFGSVSIDTALVEENVREANVVTMDNGCVCCTVRGDL
VKALLNFLDRRDTFDCILLETTGIADPSPIVATFTQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003495CobW/HypB/UreG_dom
IPR027417P-loop_NTPase