prot_H-elongata_contig20764.5971.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20764.5971.1
Unique Nameprot_H-elongata_contig20764.5971.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1516
Homology
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: D8LBN4_ECTSI (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN4_ECTSI)

HSP 1 Score: 1036 bits (2679), Expect = 0.000e+0
Identity = 739/1586 (46.60%), Postives = 900/1586 (56.75%), Query Frame = 0
Query:    1 MDCFASPKRFGHYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVELVLEEEG-SLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNV-APPTNANGGEERVTAAHCPGPPPS---ASDASSKGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFL-APGVVGAGLGAVTSIASSFASEE-----VALFGHQHGGIVLWDWIRRKKLALRGLAPGGDGTGNEPDG--------------EVTCLSFHPDGGAFAAGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSLVEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSVSAHPSKSXXXXXXXXXXXXSSASLSVFATLETVVFVPFAVGQERLSHVHAVVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDNGDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVLACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVT--GLDMAREAGV-GSEPP-SKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSDGRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGADEDERVPVTALDAWMERDHVAET------GRNACWVAVGLGSGEVSVFVLSSRIGADGXXXXXXXXXXXXXKIKLGGLSPLAARPVEVSEVQL-----SGDAMEEHSEGGGPL-KKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIK----------ENEKLNERSGYVLADDFKGIE-VEERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQELSEAMMDEDVWSAS-SGPSPTQPVVDDVPGAGNPPREERKGKNERVARN----ASLVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACLLPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLDGWLNVFDLASREPVDIAQVPGLTRDSSGG----------GGVCGVDTAPAQTASGARQDVPERTWLFCIDERGVPLVPYASETLSL-FHPTPSLPEAERGSDVRGGNVDPENDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREGVAVVVAIEEGKG---AAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSVKGNSCTPRVDGAGVCIVPAGGGGNEEKVGRRGCLIVTDTSGFVTALLLPSLSPVFRDRHSFPSGGGALQTKAEGMSQESVCNLVGELTIQGTAGELTRWSLLTDEAYSRLMNSKPRLIKVSKLVTPIATSKGSLAGQSGDGTGGGQLQQRLLHPRGNRSSSKGVLGRFSLGGSKKSISDVFSVEPSPRSTLWRQSSGESAHSVSSGSAASMHIERSSGHEEQEATAHRHALFGKRESGAGGAAVVVKTSSGRSTGGVGRTHDALSEARDLAVERGEKLSNMVDKSRQLEDSAMAFGDMAKQLRRHQQKEEECCLS 1515
            M  FASPKR GH+G I++ C LSYEP+NGL+AVAS  G+VKV G  GVELVLEEEG S+ G+DP ++LLF T  LLVGVT TGAV+ WDL    R G++ +PP  A G +ERVT+ H  G       ASDA  +  YVFLG +SGRV VAQV PV R SGY VEP + +  AP+E L AP   G  LGAVT+IAS F   +       +FGH+ GGIV+WDW+RRK+LALR L   G   G +                 EVT L+ HP G AFAAGF +GCYAVF  SS       P RWV EVGDDGSCPREG TIVRTAVSLV W+ VRG G G  +T GL+VAGGVE+EEGEEPDGVSLLVP ++ A G+      + XXXXXXXXXXXX     +  A LET VFVPFA+GQERLSHVH V+       SG G  A T       + +SG             L++    G  ++   A+    E    E ++VLGLV WNEE  G  GRL F   SS+ ACPIQTSP+ ALLQL PE  G HLSGFA VTAV STPL+SSSTILDF+T  G +  +E G  GS+   S +LRGG LRW D VP R RDEAL TSE+L+AGHSDG ++ WEC GPA RQD+V +SEGRV+  E+PSG   LG++ A  L    +      VTALD W+ERDHVA        GRNACWVAVGL SG+  V VLS+R+ A               K   GG +PLA +PVEVS+V+L     +GD   + S GGG L K+ ++   G +      +G  E D ELEAAI +AR +ARAI           EN +  E  G V  DD +  E V   G A+  D+ E              E + LRQELSEAM DE  WS S   P P +P     P       E  KG+ E++  +    ASL+QLALRLHSH VRCVALSFD  GSAL LVVAD  GVVS+T+VSTGSA LLPMR P+ RPC PS+TIGP+P AL      +        GA+GALFVLL+GWLNVFDLASR+PVD  QVPGL   S              G+   D A +   + +R+   E  WL C+D+ G+PL PYASE  S  F P P    A  G++  G  +DPE+  + +    TIWV+P  S TALD++HEHELQ +SD P P   LL VR   AVV+AI         +  F+RRG     D A FKGRSGAELVV++R  LP  + ++  P +DGAGVC+V A GG   E                  A  +P      R     P    +  ++++G   +S            + G+              L +S+ R                                           S+KG+LGR SLGGSKK+I+DVF+VEPS R       SG +                      Q     R ALFG+RE+GAGG          R  GGV   H A SEARDLA+ERGEKL N+VD+SRQLEDSAMAFGDMAKQLR+ QQ++E CC+S
Sbjct:   35 MGSFASPKRLGHHGSISDACVLSYEPTNGLMAVASRGGLVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPATGLDERVTSVHSHGXXXXXXLASDAHEER-YVFLGFESGRVRVAQVFPVYRESGYTVEPQNTSHGAPDELLQAP---GKSLGAVTAIAS-FGDRDGGGGGFGIFGHRCGGIVVWDWVRRKRLALRSL---GKSQGKKEXXXXXXXXDFEDREGREVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHETGPPRWVREVGDDGSCPREGPTIVRTAVSLVRWVRVRGAGAG--RTSGLVVAGGVEIEEGEEPDGVSLLVP-SSEAVGA------RGXXXXXXXXXXXXXXVVTAAKAALETAVFVPFAMGQERLSHVHCVL-------SGTG--APTREPRRAGTRSSG------------DLSEDARVGGKDEPDSAAAQEDEVEVAEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIQTSPYVALLQLAPERFGPHLSGFATVTAVASTPLLSSSTILDFMTCLGAEQVQEEGRNGSQTTASPLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGTVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAAGAAAAGRNACWVAVGLESGDARVIVLSNRMEAGCSNPEFPSGSGGGCKAGSGGGTPLAEKPVEVSDVKLGDDGTTGDDSTKGSSGGGRLLKRFLKRGTGQQPSPGDEEGAME-DTELEAAIAEARAEARAIAALEESREGAPENAETPEPRGTV--DDARKRESVGGEGEAQETDDHE--------------ESDHLRQELSEAMADEGAWSGSVMSPLPKRPPPKHAP-------EAEKGEEEKLRLDEPPKASLIQLALRLHSHAVRCVALSFDARGSALVLVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSALSGGQTPEP-------GASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDDSXXXXXXXXXRAGIREDDFAGSAGRTRSRERSEETPWLACVDKHGLPLQPYASEPFSSSFSPPPRKDHA--GTEADGVKLDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPARRSAVPPTIDGAGVCLVAAAGGEGLE------------------AATMPDCEEARRRWRRSPCAIPSGSSRSKGWQGQS------------STGDXXXXXXXXXXXXXXLSSSRGR-------------------------------------------SAKGMLGRLSLGGSKKNIADVFAVEPSLRQDSIGGGSGSTRSXXXXXXXXXXXXXXXXXXXXQTEQHQRDALFGQREAGAGGGGETSAVGGAR--GGVSGAHAAASEARDLAIERGEKLENLVDRSRQLEDSAMAFGDMAKQLRK-QQEDEACCIS 1469          
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: A0A6H5K0L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L8_9PHAE)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 660/1365 (48.35%), Postives = 805/1365 (58.97%), Query Frame = 0
Query:    1 MDCFASPKRFGHYGPINNVCALSYEPSN-----------------------------GLIAVASLKGMVKVSGAVGVELVLEEEG-SLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNV-APPTNANGGEERVTAAHCPGPPPSASDASS--KGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFL-APGVVGAGLGAVTSIASSFASEE----VALFGHQHGGIVLWDWIRRKKLALRGLAPGG------------DGTGNEPDGEVTCLSFHPDGGAFAAGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSLVEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSVSAHPSKSXXXXXXXXXXXXSSASLSVFATLETVVFVPFAVGQERLSHVHAVVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDNGDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVLACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVT--GLDMAREAGV-GSE---PPSKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSDGRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGADEDERVPVTALDAWMERDHVAET---GRNACWVAVGLGSGEVSVFVLSSRIGADGXXXXXXXXXXXXXKIKLGGLSPLAARPVEVSEVQL-----SGDAMEEHSEGGGPLKKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIKENEKLNERS-GYVLADDFKGIEVE-----ERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQELSEAMMDEDVWSAS-SGPSPTQPVVDDVPGAGNPPREERKGKNERVARN----ASLVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACLLPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLDGWLNVFDLASREPVDIAQVPGLTRDSSGG-----------GGVCGVDTAPAQTASGARQDVPERTWLFCIDERGVPLVPYASETLSL-FHPTPSLPEAERGSDVRGGNVDPENDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREGVAVVVAIEEGKG---AAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSVKGNSCTPRVDGAGVCIVPAGGG-GNEEKVGRRGCLIVTDTSGFVTALLLPSLSPVFRDRHSFPSGGGALQTKAEG 1274
            M  FASPKR GH+G I++ C LSYEP+N                             GL+AVAS  G+VKV G  GVELVLEEEG S+ G+DP ++LLF T  LLVGVT TGAV+ WDL    R G++ +PP    G +ERVT+ H  G       AS   K  YVFLG +SGRV VAQV PVCR SGY VEP + +  AP+E L AP   G  LGAVT+IAS F   +      +FGH+ GGIV+WDW+RRK+LALR L                +   ++   EVT L+ HP G AFAAGF +GCYAVF  SS         RWV EVGDDGSCPREG TIVRTAVSLV+W+ VRG G G  +T GL+VAGGVE+EEGEEPDGVSLLV ++  A G+          XXXXXXXXXX     +  A LET VFVPFA+GQERLSHVH V+ +  G  +    +A T +   G  S    V    E     A  D                  E    E ++VLGLV WNEE  G  GRL F   SS+ ACPI+TSP+ ALLQL PE  G HLSGFA VTAV  TPL+SSSTILDF+T  G + A E G  GS+   PP  +LRGG LRW D VP R RDEAL TSE+L+AGHSDG ++ WEC GPA RQD+V +SEGRV+  E+PSGA  LG++ A  L    +      VTALD W+ERDHVA     GRNACWVAVGL SG+  V VLS+R+ A               K + GG +PLA +PVEVS+V+L     +GDA  + S GGG L K    R   +  + G +  A  D ELEAAI +AR +ARAI   E+  E + G     + +G  V+     E  G EG+ ++            +Q E + LRQELSEAM DE  WS S   PSP +P     P       E   G+ E++  +    ASL+QLALRLHSH VRCVALSFD  GSALALVVAD  GVVS+T+VSTGSA LLPMR P+ RPC PS+TIGP+P AL   +A        K GA+GALFVLL+GWLNVFDLASR+PVD  QVPGL   S               G+   D A +   + +R+   E  WL C+D RG+PL+PYASE  S  F P P   E +  +D  GG +DPE+  + +    TIWV+P  S TALD++HEHELQ +SD P P   LL VR   AVV+AI         +  F+RRG     D A FKGRSGAELVV++R  LP    ++  P +DG GVC+V A GG G E + GRRGCLI  D+SGFVTA  +P+     R     P    +  ++++G
Sbjct:   35 MGSFASPKRLGHHGSISDACVLSYEPTNPPYSSQLGRPSMHSRCQSELLLLFCTRAQGLMAVASCGGLVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPVTGLDERVTSVHAHGGGDGGGPASDAHKERYVFLGFESGRVRVAQVFPVCRESGYTVEPQNTSHGAPDELLQAP---GKSLGAVTAIAS-FGDRDGCGGFGIFGHRCGGIVVWDWVRRKRLALRSLGKSQGKKEXXXXXYEEENFEDQKGHEVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHEADLPRWVREVGDDGSCPREGPTIVRTAVSLVQWVRVRGAGVG--RTSGLVVAGGVEIEEGEEPDGVSLLV-LSTEAVGA--------RGXXXXXXXXXXXDVVTAAKAALETAVFVPFAMGQERLSHVHCVL-SGAGAPTQEPHWAGTRSS--GDLSEDASVDGKDEPEPAAAQED------------------EVEVVEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIRTSPYVALLQLAPERFGPHLSGFATVTAVACTPLLSSSTILDFMTCLGAEQAEEEGQNGSQTTAPP--LLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGAVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAVPAGRNACWVAVGLESGDARVIVLSNRMEAGSSSPDFPCGSGGSSKARSGGGTPLAEKPVEVSDVKLGDDGTTGDASAKGSSGGGRLLKRFLKRGAGQQPSLGDEEGAMEDTELEAAIAQARAEARAIVALEESREGAPGNAETAEPRGAAVDDARKRESVGGEGEAQE----------TDDQGESDHLRQELSEAMADEGAWSGSVMPPSPKRPPTKHTP-------EAETGEEEKLPLDEPPKASLIQLALRLHSHAVRCVALSFDARGSALALVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSALSGGAAP-------KPGASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDXXXXXXXXXXXXRAGIREDDFAGSAGRTRSRERGEETPWLACVDNRGLPLLPYASEPFSSSFSPPPR--EDDASTDADGGKIDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPAGRSAVPPTIDGVGVCMVAAAGGRGLEREAGRRGCLIAADSSGFVTAATMPNCEEARRRWRRSPCAISSGSSRSKG 1331          
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: H3GHX9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHX9_PHYRM)

HSP 1 Score: 60.1 bits (144), Expect = 4.330e-5
Identity = 71/270 (26.30%), Postives = 113/270 (41.85%), Query Frame = 0
Query:   12 HYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVELVLE----EEGSLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLM--EARRCGNVAPPTNANGGEERVTAAHCPGPPPSASDASSKGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFLAPGVVGAGLGAVTSIASSFASEEVALFGHQH-GGIVLWDWIRRKKLALRGLAPGGDGTGNEP--DGEVTC-----LSFHPDGGAFAAGFESGCYAVFPSSSIH 267
            H+G  +N  AL++    GL+AV +  G VK+ GA G+E++L+    E   + G     +L F   Q LV      ++  +DL   +A  C +    ++     E ++ A+ P              +  +    G V V       RVS Y + P DL          P   G     VT++AS      + L  +     ++LWD+ +RK +    L+         P  DG+V C     LS+H  G  F AG++ G +A+F S   H
Sbjct:   38 HHGVPSNAKALAFCGLQGLLAVGTAAGAVKLFGAQGLEVLLDGPTSESHLVVG---ITHLRFTARQRLVVCYTDSSMRVFDLASGDALCCVSDRWTSSVITSLETLSYANVP--------------FFLVATDDGHVHVVHE-ETGRVSTYVIRPQDLPT--------PNAEG-----VTAMASHPRDSNLLLLAYDTCPSVLLWDFAKRKVVKEFSLSGKAHKPAETPSADGDVVCNSPQSLSWHSSGKRFVAGYKQGGFAIFRSDKSH 276          
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: A0A2D4BWW7_PYTIN (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWW7_PYTIN)

HSP 1 Score: 58.9 bits (141), Expect = 9.650e-5
Identity = 85/322 (26.40%), Postives = 123/322 (38.20%), Query Frame = 0
Query:    2 DCFASPKRFGHYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVELVLEEE-------GSLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLM---EARRCGNVAPP--TNANGGEERVTAAHCPGPPPSASDASSKGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFLAPGVVGAGLGAVTSIASSFASEEVALFGHQHGGIV-LWDWIRRKKLALRGLAP----------GGDGTG---NEPDGEVTCLSFHPDGGAFAAGF------------ESGCYAVFP--SSSIHDSALTPR-----RWVC 278
            D FA  +   H+G  +N   L+     GL+AV +  G VK+ G   +E++LE         G         +L F  HQ LV      ++  +DL     A  C  V+    T +    E +T    P              +VF+ L  G V V       ++S Y + P D+     EE          L  VT++A++       L   +    V LWD+ + K +    LA           G D  G   NEP+  V  LS+H  G  F AGF            E G Y V P   +S+HD+A  P      +W+C
Sbjct:   31 DMFALTQ-IAHHGVPSNAKTLALCGLQGLLAVGTASGHVKLYGRDNLEVLLEAPRPISSSVGGTTTTTGVVFLRFTAHQRLVATYTDSSIRIFDLSALPNAPPCAQVSETWTTCSITSVETITYQAFP--------------FVFVALDDGSVHVLHE-ETGKMSTYTITPRDVGITTTEE-------DKHLQYVTAMATNPRDANQLLLAFEATSTVFLWDFAKHKVIKEFSLAAVKTTKHAASFGSDTDGSSSNEPNA-VLSLSWHASGKRFVAGFKHGGFGVFRVDKEKGLYHVVPRIGTSVHDAATAPTPIKQIQWIC 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBN4_ECTSI0.000e+046.60V-SNARE coiled-coil homology domain-containing pro... [more]
A0A6H5K0L8_9PHAE0.000e+048.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GHX9_PHYRM4.330e-526.30Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2D4BWW7_PYTIN9.650e-526.40V-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 775..795
NoneNo IPR availableGENE3D1.20.5.110coord: 1451..1507
e-value: 1.2E-10
score: 43.2
NoneNo IPR availablePANTHERPTHR10241:SF25TOMOSYN, ISOFORM Ccoord: 6..311
coord: 1233..1503
NoneNo IPR availablePANTHERPTHR10241LETHAL 2 GIANT LARVAE PROTEINcoord: 6..311
coord: 1233..1503
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 1457..1504
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..272
e-value: 4.4E-6
score: 27.8
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 1449..1509
score: 9.782
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 15..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20764contigH-elongata_contig20764:699..6059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20764.5971.1mRNA_H-elongata_contig20764.5971.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20764 385..6150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20764.5971.1 ID=prot_H-elongata_contig20764.5971.1|Name=mRNA_H-elongata_contig20764.5971.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1516bp
MDCFASPKRFGHYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVEL
VLEEEGSLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNVAP
PTNANGGEERVTAAHCPGPPPSASDASSKGIYVFLGLQSGRVLVAQVLPV
CRVSGYAVEPCDLAARAPEEFLAPGVVGAGLGAVTSIASSFASEEVALFG
HQHGGIVLWDWIRRKKLALRGLAPGGDGTGNEPDGEVTCLSFHPDGGAFA
AGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSL
VEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSV
SAHPSKSEGKARTRERDRASSASLSVFATLETVVFVPFAVGQERLSHVHA
VVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDN
GDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVL
ACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVTG
LDMAREAGVGSEPPSKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSD
GRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGAD
EDERVPVTALDAWMERDHVAETGRNACWVAVGLGSGEVSVFVLSSRIGAD
GDSEGGSGSGDGEGKIKLGGLSPLAARPVEVSEVQLSGDAMEEHSEGGGP
LKKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIKENEKLNE
RSGYVLADDFKGIEVEERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQE
LSEAMMDEDVWSASSGPSPTQPVVDDVPGAGNPPREERKGKNERVARNAS
LVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACL
LPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLD
GWLNVFDLASREPVDIAQVPGLTRDSSGGGGVCGVDTAPAQTASGARQDV
PERTWLFCIDERGVPLVPYASETLSLFHPTPSLPEAERGSDVRGGNVDPE
NDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREG
VAVVVAIEEGKGAAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSV
KGNSCTPRVDGAGVCIVPAGGGGNEEKVGRRGCLIVTDTSGFVTALLLPS
LSPVFRDRHSFPSGGGALQTKAEGMSQESVCNLVGELTIQGTAGELTRWS
LLTDEAYSRLMNSKPRLIKVSKLVTPIATSKGSLAGQSGDGTGGGQLQQR
LLHPRGNRSSSKGVLGRFSLGGSKKSISDVFSVEPSPRSTLWRQSSGESA
HSVSSGSAASMHIERSSGHEEQEATAHRHALFGKRESGAGGAAVVVKTSS
GRSTGGVGRTHDALSEARDLAVERGEKLSNMVDKSRQLEDSAMAFGDMAK
QLRRHQQKEEECCLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001388Synaptobrevin
IPR036322WD40_repeat_dom_sf