|
|
Homology
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: D8LBN4_ECTSI (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN4_ECTSI) HSP 1 Score: 1043 bits (2696), Expect = 0.000e+0 Identity = 747/1616 (46.23%), Postives = 911/1616 (56.37%), Query Frame = 2
Query: 2 QVGISHPGGAPQPRQGRGSPPEVDEDVSEAMDCFASPKRFGHYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVELVLEEEG-SLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNV-APPTNANGGEERVTAAHCPGPPPS---ASDASSKGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFL-APGVVGAGLGAVTSIASSFASEE-----VALFGHQHGGIVLWDWIRRKKLALRGLAPGGDGTGNEPDG--------------EVTCLSFHPDGGAFAAGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSLVEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSVSAHPSKSXXXXXXXXXXXXSSASLSVFATLETVVFVPFAVGQERLSHVHAVVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDNGDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVLACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVT--GLDMAREAGV-GSEPP-SKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSDGRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGADEDERVPVTALDAWMERDHVAET------GRNACWVAVGLGSGEVSVFVLSSRIGADGXXXXXXXXXXXXXKIKLGGLSPLAARPVEVSEVQL-----SGDAMEEHSEGGGPL-KKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIK----------ENEKLNERSGYVLADDFKGIE-VEERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQELSEAMMDEDVWSAS-SGPSPTQPVVDDVPGAGNPPREERKGKNERVARN----ASLVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACLLPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLDGWLNVFDLASREPVDIAQVPGLTRDSSGG----------GGVCGVDTAPAQTASGARQDVPERTWLFCIDERGVPLVPYASETLSL-FHPTPSLPEAERGSDVRGGNVDPENDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREGVAVVVAIEEGKG---AAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSVKGNSCTPRVDGAGVCIVPAGGGGNEEKVGRRGCLIVTDTSGFVTALLLPSLSPVFRDRHSFPSGGGALQTKAEGMSQESVCNLVGELTIQGTAGELTRWSLLTDEAYSRLMNSKPRLIKVSKLVTPIATSKGSLAGQSGDGTGGGQLQQRLLHPRGNRSSSKGVLGRFSLGGSKKSISDVFSVEPSPRSTLWRQSSGESAHSVSSGSAASMHIERSSGHEEQEATAHRHALFGKRESGAGGAAVVVKTSSGRSTGGVGRTHDALSEARDLAVERGEKLSNMVDKSRQLEDSAMAFGDMAKQLRRHQQKEEECCLS 4636
QVG+ G Q P D D ++ M FASPKR GH+G I++ C LSYEP+NGL+AVAS G+VKV G GVELVLEEEG S+ G+DP ++LLF T LLVGVT TGAV+ WDL R G++ +PP A G +ERVT+ H G ASDA + YVFLG +SGRV VAQV PV R SGY VEP + + AP+E L AP G LGAVT+IAS F + +FGH+ GGIV+WDW+RRK+LALR L G G + EVT L+ HP G AFAAGF +GCYAVF SS P RWV EVGDDGSCPREG TIVRTAVSLV W+ VRG G G +T GL+VAGGVE+EEGEEPDGVSLLVP ++ A G+ + XXXXXXXXXXXX + A LET VFVPFA+GQERLSHVH V+ SG G A T + +SG L++ G ++ A+ E E ++VLGLV WNEE G GRL F SS+ ACPIQTSP+ ALLQL PE G HLSGFA VTAV STPL+SSSTILDF+T G + +E G GS+ S +LRGG LRW D VP R RDEAL TSE+L+AGHSDG ++ WEC GPA RQD+V +SEGRV+ E+PSG LG++ A L + VTALD W+ERDHVA GRNACWVAVGL SG+ V VLS+R+ A K GG +PLA +PVEVS+V+L +GD + S GGG L K+ ++ G + +G E D ELEAAI +AR +ARAI EN + E G V DD + E V G A+ D+ E E + LRQELSEAM DE WS S P P +P P E KG+ E++ + ASL+QLALRLHSH VRCVALSFD GSAL LVVAD GVVS+T+VSTGSA LLPMR P+ RPC PS+TIGP+P AL + GA+GALFVLL+GWLNVFDLASR+PVD QVPGL S G+ D A + + +R+ E WL C+D+ G+PL PYASE S F P P A G++ G +DPE+ + + TIWV+P S TALD++HEHELQ +SD P P LL VR AVV+AI + F+RRG D A FKGRSGAELVV++R LP + ++ P +DGAGVC+V A GG E A +P R P + ++++G +S + G+ L +S+ R S+KG+LGR SLGGSKK+I+DVF+VEPS R SG + Q R ALFG+RE+GAGG R GGV H A SEARDLA+ERGEKL N+VD+SRQLEDSAMAFGDMAKQLR+ QQ++E CC+S
Sbjct: 7 QVGLKSSAGEEQREGPENDGP--DADAADVMGSFASPKRLGHHGSISDACVLSYEPTNGLMAVASRGGLVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPATGLDERVTSVHSHGXXXXXXLASDAHEER-YVFLGFESGRVRVAQVFPVYRESGYTVEPQNTSHGAPDELLQAP---GKSLGAVTAIAS-FGDRDGGGGGFGIFGHRCGGIVVWDWVRRKRLALRSL---GKSQGKKEXXXXXXXXDFEDREGREVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHETGPPRWVREVGDDGSCPREGPTIVRTAVSLVRWVRVRGAGAG--RTSGLVVAGGVEIEEGEEPDGVSLLVP-SSEAVGA------RGXXXXXXXXXXXXXXVVTAAKAALETAVFVPFAMGQERLSHVHCVL-------SGTG--APTREPRRAGTRSSG------------DLSEDARVGGKDEPDSAAAQEDEVEVAEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIQTSPYVALLQLAPERFGPHLSGFATVTAVASTPLLSSSTILDFMTCLGAEQVQEEGRNGSQTTASPLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGTVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAAGAAAAGRNACWVAVGLESGDARVIVLSNRMEAGCSNPEFPSGSGGGCKAGSGGGTPLAEKPVEVSDVKLGDDGTTGDDSTKGSSGGGRLLKRFLKRGTGQQPSPGDEEGAME-DTELEAAIAEARAEARAIAALEESREGAPENAETPEPRGTV--DDARKRESVGGEGEAQETDDHE--------------ESDHLRQELSEAMADEGAWSGSVMSPLPKRPPPKHAP-------EAEKGEEEKLRLDEPPKASLIQLALRLHSHAVRCVALSFDARGSALVLVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSALSGGQTPEP-------GASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDDSXXXXXXXXXRAGIREDDFAGSAGRTRSRERSEETPWLACVDKHGLPLQPYASEPFSSSFSPPPRKDHA--GTEADGVKLDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPARRSAVPPTIDGAGVCLVAAAGGEGLE------------------AATMPDCEEARRRWRRSPCAIPSGSSRSKGWQGQS------------STGDXXXXXXXXXXXXXXLSSSRGR-------------------------------------------SAKGMLGRLSLGGSKKNIADVFAVEPSLRQDSIGGGSGSTRSXXXXXXXXXXXXXXXXXXXXQTEQHQRDALFGQREAGAGGGGETSAVGGAR--GGVSGAHAAASEARDLAIERGEKLENLVDRSRQLEDSAMAFGDMAKQLRK-QQEDEACCIS 1469
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: A0A6H5K0L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L8_9PHAE) HSP 1 Score: 980 bits (2533), Expect = 0.000e+0 Identity = 671/1398 (48.00%), Postives = 820/1398 (58.66%), Query Frame = 2
Query: 2 QVGISHPGGAPQPRQGRGSPPEV---DEDVSEAMDCFASPKRFGHYGPINNVCALSYEPSN-----------------------------GLIAVASLKGMVKVSGAVGVELVLEEEG-SLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNV-APPTNANGGEERVTAAHCPGPPPSASDASS--KGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFL-APGVVGAGLGAVTSIASSFASEE----VALFGHQHGGIVLWDWIRRKKLALRGLAPGG------------DGTGNEPDGEVTCLSFHPDGGAFAAGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSLVEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSVSAHPSKSXXXXXXXXXXXXSSASLSVFATLETVVFVPFAVGQERLSHVHAVVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDNGDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVLACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVT--GLDMAREAGV-GSE---PPSKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSDGRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGADEDERVPVTALDAWMERDHVAET---GRNACWVAVGLGSGEVSVFVLSSRIGADGXXXXXXXXXXXXXKIKLGGLSPLAARPVEVSEVQL-----SGDAMEEHSEGGGPLKKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIKENEKLNERS-GYVLADDFKGIEVE-----ERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQELSEAMMDEDVWSAS-SGPSPTQPVVDDVPGAGNPPREERKGKNERVARN----ASLVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACLLPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLDGWLNVFDLASREPVDIAQVPGLTRDSSGG-----------GGVCGVDTAPAQTASGARQDVPERTWLFCIDERGVPLVPYASETLSL-FHPTPSLPEAERGSDVRGGNVDPENDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREGVAVVVAIEEGKG---AAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSVKGNSCTPRVDGAGVCIVPAGGG-GNEEKVGRRGCLIVTDTSGFVTALLLPSLSPVFRDRHSFPSGGGALQTKAEG 3913
QVG+ G Q R+G PE D D ++ M FASPKR GH+G I++ C LSYEP+N GL+AVAS G+VKV G GVELVLEEEG S+ G+DP ++LLF T LLVGVT TGAV+ WDL R G++ +PP G +ERVT+ H G AS K YVFLG +SGRV VAQV PVCR SGY VEP + + AP+E L AP G LGAVT+IAS F + +FGH+ GGIV+WDW+RRK+LALR L + ++ EVT L+ HP G AFAAGF +GCYAVF SS RWV EVGDDGSCPREG TIVRTAVSLV+W+ VRG G G +T GL+VAGGVE+EEGEEPDGVSLLV ++ A G+ XXXXXXXXXX + A LET VFVPFA+GQERLSHVH V+ + G + +A T + G S V E A D E E ++VLGLV WNEE G GRL F SS+ ACPI+TSP+ ALLQL PE G HLSGFA VTAV TPL+SSSTILDF+T G + A E G GS+ PP +LRGG LRW D VP R RDEAL TSE+L+AGHSDG ++ WEC GPA RQD+V +SEGRV+ E+PSGA LG++ A L + VTALD W+ERDHVA GRNACWVAVGL SG+ V VLS+R+ A K + GG +PLA +PVEVS+V+L +GDA + S GGG L K R + + G + A D ELEAAI +AR +ARAI E+ E + G + +G V+ E G EG+ ++ +Q E + LRQELSEAM DE WS S PSP +P P E G+ E++ + ASL+QLALRLHSH VRCVALSFD GSALALVVAD GVVS+T+VSTGSA LLPMR P+ RPC PS+TIGP+P AL +A K GA+GALFVLL+GWLNVFDLASR+PVD QVPGL S G+ D A + + +R+ E WL C+D RG+PL+PYASE S F P P E + +D GG +DPE+ + + TIWV+P S TALD++HEHELQ +SD P P LL VR AVV+AI + F+RRG D A FKGRSGAELVV++R LP ++ P +DG GVC+V A GG G E + GRRGCLI D+SGFVTA +P+ R P + ++++G
Sbjct: 7 QVGLKSSDGEEQ-REG----PETNGPDADAADVMGSFASPKRLGHHGSISDACVLSYEPTNPPYSSQLGRPSMHSRCQSELLLLFCTRAQGLMAVASCGGLVKVFGGPGVELVLEEEGASVAGEDPPSHLLFATPSLLVGVTATGAVLVWDLAAGGRGGSIPSPPDPVTGLDERVTSVHAHGGGDGGGPASDAHKERYVFLGFESGRVRVAQVFPVCRESGYTVEPQNTSHGAPDELLQAP---GKSLGAVTAIAS-FGDRDGCGGFGIFGHRCGGIVVWDWVRRKRLALRSLGKSQGKKEXXXXXYEEENFEDQKGHEVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHEADLPRWVREVGDDGSCPREGPTIVRTAVSLVQWVRVRGAGVG--RTSGLVVAGGVEIEEGEEPDGVSLLV-LSTEAVGA--------RGXXXXXXXXXXXDVVTAAKAALETAVFVPFAMGQERLSHVHCVL-SGAGAPTQEPHWAGTRSS--GDLSEDASVDGKDEPEPAAAQED------------------EVEVVEELVVLGLVKWNEEFLGDDGRLHFRLASSIQACPIRTSPYVALLQLAPERFGPHLSGFATVTAVACTPLLSSSTILDFMTCLGAEQAEEEGQNGSQTTAPP--LLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDAVCLSEGRVVMREVPSGAVLLGSVPAAGLGSPEEGAGNAAVTALDVWVERDHVAAAVPAGRNACWVAVGLESGDARVIVLSNRMEAGSSSPDFPCGSGGSSKARSGGGTPLAEKPVEVSDVKLGDDGTTGDASAKGSSGGGRLLKRFLKRGAGQQPSLGDEEGAMEDTELEAAIAQARAEARAIVALEESREGAPGNAETAEPRGAAVDDARKRESVGGEGEAQE----------TDDQGESDHLRQELSEAMADEGAWSGSVMPPSPKRPPTKHTP-------EAETGEEEKLPLDEPPKASLIQLALRLHSHAVRCVALSFDARGSALALVVADEAGVVSVTDVSTGSASLLPMRVPQSRPCRPSVTIGPMPSALSGGAAP-------KPGASGALFVLLEGWLNVFDLASRDPVDFVQVPGLAPPSDXXXXXXXXXXXXRAGIREDDFAGSAGRTRSRERGEETPWLACVDNRGLPLLPYASEPFSSSFSPPPR--EDDASTDADGGKIDPEDAPVHS---HTIWVSPVPSRTALDDYHEHELQVLSDTPPPEPLLLVVRGATAVVLAISRRDADGVTSSVFARRGSVS-PDAATFKGRSGAELVVRSRGTLPPAGRSAVPPTIDGVGVCMVAAAGGRGLEREAGRRGCLIAADSSGFVTAATMPNCEEARRRWRRSPCAISSGSSRSKG 1331
BLAST of mRNA_H-elongata_contig20764.5971.1 vs. uniprot
Match: H3GHX9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHX9_PHYRM) HSP 1 Score: 60.1 bits (144), Expect = 4.780e-5 Identity = 71/270 (26.30%), Postives = 113/270 (41.85%), Query Frame = 2
Query: 125 HYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVELVLE----EEGSLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLM--EARRCGNVAPPTNANGGEERVTAAHCPGPPPSASDASSKGIYVFLGLQSGRVLVAQVLPVCRVSGYAVEPCDLAARAPEEFLAPGVVGAGLGAVTSIASSFASEEVALFGHQH-GGIVLWDWIRRKKLALRGLAPGGDGTGNEP--DGEVTC-----LSFHPDGGAFAAGFESGCYAVFPSSSIH 892
H+G +N AL++ GL+AV + G VK+ GA G+E++L+ E + G +L F Q LV ++ +DL +A C + ++ E ++ A+ P + + G V V RVS Y + P DL P G VT++AS + L + ++LWD+ +RK + L+ P DG+V C LS+H G F AG++ G +A+F S H
Sbjct: 38 HHGVPSNAKALAFCGLQGLLAVGTAAGAVKLFGAQGLEVLLDGPTSESHLVVG---ITHLRFTARQRLVVCYTDSSMRVFDLASGDALCCVSDRWTSSVITSLETLSYANVP--------------FFLVATDDGHVHVVHE-ETGRVSTYVIRPQDLPT--------PNAEG-----VTAMASHPRDSNLLLLAYDTCPSVLLWDFAKRKVVKEFSLSGKAHKPAETPSADGDVVCNSPQSLSWHSSGKRFVAGYKQGGFAIFRSDKSH 276
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 62.8 |
| Seed ortholog evalue | 1.6e-06 |
| Seed eggNOG ortholog | 42099.EPrPV00000015215 |
| Preferred name | STXBP5 |
| KEGG ko | ko:K06094,ko:K08518,ko:K08519,ko:K08775,ko:K17278 |
| KEGG Pathway | ko03440,ko03460,ko04390,ko04391,ko04530,ko05165,ko05200,ko05212,ko05224,map03440,map03460,map04390,map04391,map04530,map05165,map05200,map05212,map05224 |
| GOs | GO:0000003,GO:0000132,GO:0000137,GO:0000139,GO:0000145,GO:0000149,GO:0000226,GO:0000278,GO:0000578,GO:0000902,GO:0000904,GO:0001505,GO:0001568,GO:0001700,GO:0001701,GO:0001709,GO:0001738,GO:0001763,GO:0001890,GO:0001892,GO:0001932,GO:0001933,GO:0001944,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0002791,GO:0002792,GO:0002793,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0004857,GO:0004860,GO:0005096,GO:0005198,GO:0005488,GO:0005496,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005892,GO:0005911,GO:0005918,GO:0005920,GO:0005933,GO:0005935,GO:0005937,GO:0005938,GO:0006066,GO:0006469,GO:0006629,GO:0006694,GO:0006696,GO:0006810,GO:0006836,GO:0006887,GO:0006892,GO:0006893,GO:0006996,GO:0007010,GO:0007017,GO:0007043,GO:0007044,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007264,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007391,GO:0007399,GO:0007405,GO:0007406,GO:0007409,GO:0007417,GO:0007420,GO:0007423,GO:0007431,GO:0007435,GO:0007444,GO:0007552,GO:0007560,GO:0007591,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008021,GO:0008047,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008219,GO:0008283,GO:0008285,GO:0008289,GO:0008356,GO:0008358,GO:0008360,GO:0008363,GO:0008544,GO:0008593,GO:0008595,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009994,GO:0010008,GO:0010033,GO:0010563,GO:0010605,GO:0010623,GO:0010646,GO:0010648,GO:0010717,GO:0010719,GO:0010721,GO:0010817,GO:0010941,GO:0010942,GO:0012501,GO:0012502,GO:0012505,GO:0014070,GO:0015629,GO:0016020,GO:0016021,GO:0016043,GO:0016079,GO:0016082,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016192,GO:0016323,GO:0016325,GO:0016327,GO:0016331,GO:0016332,GO:0016333,GO:0016334,GO:0016335,GO:0016336,GO:0017016,GO:0017022,GO:0017048,GO:0017049,GO:0017075,GO:0017137,GO:0017145,GO:0017156,GO:0017157,GO:0019207,GO:0019210,GO:0019216,GO:0019218,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019905,GO:0019953,GO:0019991,GO:0020037,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022612,GO:0023051,GO:0023052,GO:0023057,GO:0023061,GO:0030010,GO:0030011,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030054,GO:0030133,GO:0030141,GO:0030154,GO:0030165,GO:0030182,GO:0030234,GO:0030334,GO:0030336,GO:0030427,GO:0030695,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030951,GO:0030952,GO:0031012,GO:0031090,GO:0031175,GO:0031201,GO:0031224,GO:0031226,GO:0031267,GO:0031323,GO:0031324,GO:0031326,GO:0031338,GO:0031399,GO:0031400,GO:0031410,GO:0031503,GO:0031581,GO:0031594,GO:0031901,GO:0031982,GO:0031984,GO:0031985,GO:0032268,GO:0032269,GO:0032443,GO:0032501,GO:0032502,GO:0032504,GO:0032588,GO:0032878,GO:0032879,GO:0032880,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033500,GO:0033673,GO:0033993,GO:0034329,GO:0034330,GO:0034613,GO:0034622,GO:0034629,GO:0034702,GO:0035017,GO:0035070,GO:0035071,GO:0035072,GO:0035075,GO:0035078,GO:0035081,GO:0035088,GO:0035090,GO:0035091,GO:0035212,GO:0035239,GO:0035264,GO:0035272,GO:0035282,GO:0035293,GO:0035295,GO:0035542,GO:0035556,GO:0035748,GO:0036314,GO:0036445,GO:0040001,GO:0040003,GO:0040007,GO:0040008,GO:0040012,GO:0040013,GO:0042127,GO:0042175,GO:0042221,GO:0042303,GO:0042325,GO:0042326,GO:0042335,GO:0042337,GO:0042592,GO:0042593,GO:0042995,GO:0043009,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043235,GO:0043254,GO:0043296,GO:0043297,GO:0043332,GO:0043547,GO:0043549,GO:0043588,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044431,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044458,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045055,GO:0045159,GO:0045165,GO:0045167,GO:0045175,GO:0045176,GO:0045184,GO:0045196,GO:0045197,GO:0045200,GO:0045202,GO:0045216,GO:0045595,GO:0045596,GO:0045682,GO:0045746,GO:0045859,GO:0045920,GO:0045921,GO:0045936,GO:0046165,GO:0046676,GO:0046883,GO:0046888,GO:0046890,GO:0046903,GO:0046906,GO:0046907,GO:0048037,GO:0048102,GO:0048103,GO:0048193,GO:0048468,GO:0048469,GO:0048477,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048585,GO:0048589,GO:0048598,GO:0048599,GO:0048608,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048730,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0048880,GO:0048881,GO:0048882,GO:0048884,GO:0048915,GO:0048916,GO:0048919,GO:0048925,GO:0050678,GO:0050680,GO:0050708,GO:0050709,GO:0050714,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050796,GO:0050804,GO:0050810,GO:0050877,GO:0050890,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051093,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051270,GO:0051271,GO:0051286,GO:0051293,GO:0051294,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051601,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051668,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0055057,GO:0055059,GO:0060033,GO:0060255,GO:0060271,GO:0060284,GO:0060322,GO:0060429,GO:0060562,GO:0060589,GO:0060627,GO:0060669,GO:0060670,GO:0060674,GO:0060711,GO:0060713,GO:0060716,GO:0061138,GO:0061245,GO:0061351,GO:0061458,GO:0061564,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070121,GO:0070160,GO:0070201,GO:0070382,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072358,GO:0072359,GO:0072697,GO:0080090,GO:0090087,GO:0090162,GO:0090163,GO:0090276,GO:0090278,GO:0097159,GO:0097305,GO:0097384,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098590,GO:0098722,GO:0098725,GO:0098772,GO:0098773,GO:0098791,GO:0098793,GO:0098796,GO:0098797,GO:0098802,GO:0098805,GO:0098827,GO:0098876,GO:0098916,GO:0099003,GO:0099023,GO:0099177,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106118,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0120039,GO:0140029,GO:1900073,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901700,GO:1901981,GO:1902074,GO:1902075,GO:1902495,GO:1902652,GO:1902653,GO:1902692,GO:1902850,GO:1902930,GO:1902936,GO:1903047,GO:1903530,GO:1903531,GO:1903532,GO:1904950,GO:1904951,GO:1990351,GO:1990778,GO:2000026,GO:2000145,GO:2000146,GO:2000177,GO:2000178,GO:2000647 |
| EggNOG free text desc. | Source PGD |
| EggNOG OGs | 1MD5V@121069,KOG1110@1,KOG1110@2759,KOG1983@1,KOG1983@2759 |
| COG Functional cat. | U |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03036,ko03400,ko04121,ko04131,ko04147 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | WD40/YVTN repeat-like-containing domain |
| Ec32 ortholog | Ec-27_003330.1 |
| Exons | 3 |
| Model size | 4953 |
| Cds size | 4548 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930160.8110175-UTR-H-elongata_contig20764:384..698 | 1622930160.8110175-UTR-H-elongata_contig20764:384..698 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20764 385..698 - |
| 1691679304.4731305-UTR-H-elongata_contig20764:384..698 | 1691679304.4731305-UTR-H-elongata_contig20764:384..698 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20764 385..698 - |
| 1622930160.858724-UTR-H-elongata_contig20764:6059..6150 | 1622930160.858724-UTR-H-elongata_contig20764:6059..6150 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20764 6060..6150 - |
| 1691679304.5316887-UTR-H-elongata_contig20764:6059..6150 | 1691679304.5316887-UTR-H-elongata_contig20764:6059..6150 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20764 6060..6150 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930160.8224537-CDS-H-elongata_contig20764:698..1364 | 1622930160.8224537-CDS-H-elongata_contig20764:698..1364 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 699..1364 - |
| 1691679304.4875262-CDS-H-elongata_contig20764:698..1364 | 1691679304.4875262-CDS-H-elongata_contig20764:698..1364 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 699..1364 - |
| 1622930160.835455-CDS-H-elongata_contig20764:1636..5434 | 1622930160.835455-CDS-H-elongata_contig20764:1636..5434 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 1637..5434 - |
| 1691679304.4987187-CDS-H-elongata_contig20764:1636..5434 | 1691679304.4987187-CDS-H-elongata_contig20764:1636..5434 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 1637..5434 - |
| 1622930160.8453543-CDS-H-elongata_contig20764:5975..6059 | 1622930160.8453543-CDS-H-elongata_contig20764:5975..6059 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 5976..6059 - |
| 1691679304.513689-CDS-H-elongata_contig20764:5975..6059 | 1691679304.513689-CDS-H-elongata_contig20764:5975..6059 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20764 5976..6059 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20764.5971.1 >prot_H-elongata_contig20764.5971.1 ID=prot_H-elongata_contig20764.5971.1|Name=mRNA_H-elongata_contig20764.5971.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1516bp
MDCFASPKRFGHYGPINNVCALSYEPSNGLIAVASLKGMVKVSGAVGVEL VLEEEGSLEGDDPFAYLLFPTHQLLVGVTLTGAVVAWDLMEARRCGNVAP PTNANGGEERVTAAHCPGPPPSASDASSKGIYVFLGLQSGRVLVAQVLPV CRVSGYAVEPCDLAARAPEEFLAPGVVGAGLGAVTSIASSFASEEVALFG HQHGGIVLWDWIRRKKLALRGLAPGGDGTGNEPDGEVTCLSFHPDGGAFA AGFESGCYAVFPSSSIHDSALTPRRWVCEVGDDGSCPREGSTIVRTAVSL VEWISVRGGGGGDKKTWGLLVAGGVEMEEGEEPDGVSLLVPITASATGSV SAHPSKSEGKARTRERDRASSASLSVFATLETVVFVPFAVGQERLSHVHA VVVTDGGGSSGNGDFAATITDTLGKSSASGWVANFSESFEGTALNDRQDN GDGEKRTGASGGAAEASPEESVIVLGLVTWNEEVWGAGGRLSFCRESSVL ACPIQTSPFAALLQLDPESIGSHLSGFARVTAVTSTPLMSSSTILDFVTG LDMAREAGVGSEPPSKILRGGGLRWADGVPPRARDEALCTSEMLIAGHSD GRVTLWECYGPAPRQDSVSISEGRVLTLEIPSGAAFLGTLTARELTGGAD EDERVPVTALDAWMERDHVAETGRNACWVAVGLGSGEVSVFVLSSRIGAD GDSEGGSGSGDGEGKIKLGGLSPLAARPVEVSEVQLSGDAMEEHSEGGGP LKKIMRGRVGLKAFASGSKGDAEVDVELEAAIDKAREDARAIKENEKLNE RSGYVLADDFKGIEVEERGGAEGQDEQERKVIEKNKDGGNQVEKETLRQE LSEAMMDEDVWSASSGPSPTQPVVDDVPGAGNPPREERKGKNERVARNAS LVQLALRLHSHPVRCVALSFDTIGSALALVVADAEGVVSMTNVSTGSACL LPMRAPRIRPCLPSITIGPLPDALLRASAAQASWRGRKLGAAGALFVLLD GWLNVFDLASREPVDIAQVPGLTRDSSGGGGVCGVDTAPAQTASGARQDV PERTWLFCIDERGVPLVPYASETLSLFHPTPSLPEAERGSDVRGGNVDPE NDGLSNPAVRTIWVAPPSSSTALDNHHEHELQAMSDAPTPPSFLLAVREG VAVVVAIEEGKGAAFPFSRRGVADGVDFAAFKGRSGAELVVKARMELPSV KGNSCTPRVDGAGVCIVPAGGGGNEEKVGRRGCLIVTDTSGFVTALLLPS LSPVFRDRHSFPSGGGALQTKAEGMSQESVCNLVGELTIQGTAGELTRWS LLTDEAYSRLMNSKPRLIKVSKLVTPIATSKGSLAGQSGDGTGGGQLQQR LLHPRGNRSSSKGVLGRFSLGGSKKSISDVFSVEPSPRSTLWRQSSGESA HSVSSGSAASMHIERSSGHEEQEATAHRHALFGKRESGAGGAAVVVKTSS GRSTGGVGRTHDALSEARDLAVERGEKLSNMVDKSRQLEDSAMAFGDMAK QLRRHQQKEEECCLS* back to topmRNA from alignment at H-elongata_contig20764:385..6150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig20764.5971.1 ID=mRNA_H-elongata_contig20764.5971.1|Name=mRNA_H-elongata_contig20764.5971.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5766bp|location=Sequence derived from alignment at H-elongata_contig20764:385..6150- (Himanthalia elongata Himel1 dioecious) CCAGGTGGGCATCTCTCATCCAGGAGGCGCGCCCCAACCTCGCCAGGGGC
GGGGGTCGCCTCCGGAGGTGGACGAGGATGTCTCCGAGGCGATGGATTGC
TTTGCCAGTCCCAAGCGCTTCGGGCACTACGGCCCGATCAACAATGTGTG
CGCTCTCTCGTACGAGCCATCGAATGCAAGTCCCCAGCTCACCCAAAGAC
AGTTGTAGTTGACTGCGAGGCGTGTAATGGCTGAAGAGGCGCGAAGCGAC
TTTCACAGGAGACGTTGAAAGTGTTGCTCTGGGTTCGTAGAAAGTGAAGG
CGAGGCACGATCTGGAGCTGTGCAGCATCGAAGCGCTTGGGGTGTGTTAC
ATCATTTTGGCTCCTCGTCGAGCGTTGCCGCACAGTAGTTGGACACAGGA
TGCGGTCGGTGACCATCGTTGAGTCGCCCCCGTGGGTGCTTCAGCATGAC
CCTGTGTGTCCGTCGATAGCCCCGCTCCCCCCAGGGGCTTTCGTTATCTG
TGTTCGCGTCTACGGGTTCCCTGTGCTTTTTCGTGATTAAAAATCTTGAT
CCATTCCTCCATCCATCCGTTCACCCCCCCCTCCCCTCCCCTCCCCCCCT
AGGAAGCGTGTTCCAATTTCAAATGACAGAGGATCACAAGCGAAATGAGA
GCTCCACCTTTGACGCCCTAAATACCGCTTGAGACCCCGTTTTTCGTCGT
TCCCTGCACGGCCCAGGGTCTGATCGCCGTCGCCTCACTGAAGGGTATGG
TAAAAGTATCTGGCGCGGTGGGCGTGGAGCTGGTTCTCGAAGAGGAAGGA
TCTCTCGAGGGCGACGACCCATTCGCCTACCTTCTCTTCCCAACGCATCA
GCTCCTAGTGGGGGTCACGCTAACAGGCGCCGTGGTAGCCTGGGATCTGA
TGGAAGCCCGCCGCTGCGGGAATGTTGCCCCTCCCACAAATGCGAACGGG
GGAGAAGAGCGTGTGACGGCCGCGCACTGCCCCGGCCCGCCACCAAGCGC
TTCGGATGCCTCTTCGAAGGGGATATACGTTTTCTTGGGCCTCCAAAGTG
GCAGGGTTCTAGTGGCGCAGGTTCTCCCCGTATGCCGAGTGTCTGGGTAC
GCGGTGGAGCCCTGTGACCTTGCCGCCAGGGCGCCCGAGGAGTTTCTTGC
GCCGGGCGTCGTTGGGGCAGGCCTCGGAGCGGTCACCTCCATCGCTTCGT
CATTTGCGAGCGAGGAGGTCGCTCTCTTCGGCCACCAGCACGGGGGCATC
GTCCTGTGGGACTGGATACGGCGGAAAAAACTCGCTTTGCGAGGTCTGGC
GCCTGGCGGTGACGGAACGGGTAACGAGCCAGACGGTGAAGTAACGTGCT
TGTCATTTCACCCCGACGGGGGAGCTTTTGCCGCTGGGTTCGAGTCAGGC
TGCTATGCGGTTTTCCCCAGCTCTTCCATCCACGATTCCGCGCTAACGCC
GCGCCGCTGGGTTTGCGAAGTGGGGGATGACGGCTCTTGCCCCCGCGAAG
GGTCCACGATCGTGCGAACGGCCGTTTCTTTGGTAGAGTGGATTAGCGTG
CGCGGTGGCGGCGGCGGAGACAAAAAAACGTGGGGTTTGCTCGTTGCGGG
AGGCGTTGAGATGGAAGAGGGTGAGGAGCCTGACGGCGTGAGCTTGCTAG
TTCCCATAACCGCCTCCGCGACCGGAAGTGTTTCTGCTCATCCCTCCAAG
AGTGAGGGGAAGGCGAGGACTAGAGAAAGAGACAGGGCGTCGTCGGCCTC
GCTGTCCGTGTTTGCTACACTCGAGACGGTTGTGTTTGTGCCTTTCGCCG
TGGGACAGGAGCGACTCTCGCACGTCCACGCCGTGGTAGTGACTGACGGT
GGTGGCAGCAGTGGTAACGGAGACTTCGCGGCGACAATAACGGACACCTT
GGGGAAAAGTTCTGCTTCTGGATGGGTCGCGAACTTCTCTGAGAGTTTTG
AGGGTACGGCGCTAAACGATAGACAAGACAATGGCGATGGGGAAAAGAGA
ACGGGGGCGTCAGGAGGCGCCGCCGAAGCATCGCCCGAGGAGTCGGTCAT
CGTCCTGGGACTGGTAACGTGGAACGAAGAGGTCTGGGGCGCGGGCGGTC
GCTTGAGTTTTTGTCGTGAATCGTCTGTCTTGGCGTGTCCCATCCAGACG
AGCCCCTTTGCGGCACTTCTTCAGCTGGACCCCGAGAGCATCGGCAGTCA
TCTGTCCGGATTCGCGCGCGTGACAGCGGTGACGTCGACGCCGCTAATGT
CATCCTCCACGATCCTCGACTTCGTGACTGGTCTTGATATGGCGAGGGAA
GCCGGGGTCGGGAGCGAGCCGCCATCAAAAATCTTGAGAGGCGGCGGCCT
GAGATGGGCGGACGGGGTTCCTCCCCGCGCCCGGGATGAGGCGCTGTGCA
CTAGCGAGATGCTGATCGCGGGTCACTCGGACGGGCGAGTAACCCTTTGG
GAGTGCTACGGGCCGGCTCCGCGGCAGGACAGCGTGTCGATCTCGGAGGG
CCGGGTCCTCACACTCGAGATTCCTTCGGGAGCCGCGTTCCTGGGGACCC
TGACCGCGCGCGAGCTCACGGGAGGCGCAGACGAAGACGAGAGAGTCCCC
GTGACAGCCCTTGATGCGTGGATGGAACGCGACCACGTCGCCGAGACGGG
GCGTAACGCCTGCTGGGTGGCGGTAGGGCTCGGAAGCGGAGAAGTCTCAG
TGTTCGTGTTGTCGAGCAGGATAGGCGCTGACGGGGACTCTGAAGGGGGC
AGTGGAAGTGGCGACGGCGAGGGTAAAATTAAGCTCGGGGGACTCTCACC
GCTGGCGGCACGACCGGTCGAAGTCTCCGAAGTGCAGCTGAGTGGGGACG
CGATGGAGGAACATTCGGAAGGCGGAGGACCTTTGAAAAAAATTATGCGT
GGGCGGGTTGGCCTAAAAGCGTTCGCCAGCGGCAGCAAGGGTGATGCCGA
AGTTGACGTTGAACTGGAGGCTGCCATCGACAAGGCGCGAGAAGACGCCC
GCGCTATCAAGGAAAATGAAAAGTTGAACGAACGCAGTGGATATGTGCTG
GCGGATGATTTTAAAGGCATTGAAGTGGAGGAGCGGGGAGGTGCTGAAGG
GCAGGATGAACAAGAGAGGAAGGTGATTGAGAAAAACAAAGATGGAGGCA
ACCAAGTAGAGAAGGAAACGCTGCGGCAAGAGCTTTCCGAGGCCATGATG
GACGAAGACGTGTGGAGCGCTTCCTCTGGGCCATCTCCAACACAGCCTGT
CGTCGATGACGTCCCGGGGGCAGGAAATCCTCCAAGAGAAGAGCGAAAGG
GCAAAAACGAACGCGTCGCCCGGAACGCGTCCCTGGTGCAGCTCGCGCTG
CGCCTTCATAGCCACCCCGTCCGGTGCGTTGCGCTGTCGTTCGACACGAT
CGGTTCAGCTCTTGCGCTCGTCGTGGCGGATGCGGAGGGGGTGGTCTCTA
TGACAAACGTCTCCACGGGCTCCGCATGTCTTCTCCCGATGCGCGCGCCG
CGGATCAGGCCTTGTCTGCCAAGCATCACCATTGGACCGCTGCCGGACGC
TCTCCTTCGAGCCTCTGCGGCGCAGGCGAGCTGGAGGGGCCGAAAGCTCG
GGGCGGCCGGCGCCTTGTTCGTGCTGCTGGACGGTTGGCTCAATGTATTC
GACCTCGCCTCCAGGGAACCCGTAGATATCGCACAAGTTCCAGGGCTTAC
GCGAGACAGTAGTGGCGGTGGCGGAGTGTGCGGAGTTGACACCGCTCCCG
CGCAAACCGCGTCGGGTGCTAGGCAGGATGTACCTGAAAGAACGTGGCTG
TTCTGCATTGACGAACGCGGCGTGCCTCTTGTGCCGTACGCGTCGGAGAC
CCTGAGCTTGTTCCACCCCACCCCTTCGCTCCCTGAAGCCGAACGCGGAA
GCGACGTCCGTGGGGGAAATGTCGATCCAGAGAACGACGGCCTGAGCAAT
CCAGCCGTGCGGACGATCTGGGTGGCGCCCCCATCCTCGAGCACGGCCCT
CGACAACCACCACGAGCACGAGCTACAGGCAATGAGCGACGCCCCGACGC
CCCCGAGCTTCCTGCTCGCTGTGCGCGAGGGCGTGGCTGTTGTGGTGGCC
ATCGAAGAAGGGAAGGGAGCTGCCTTCCCCTTCTCGAGACGCGGCGTCGC
CGACGGCGTGGACTTCGCCGCTTTCAAGGGAAGATCGGGCGCCGAGTTGG
TGGTAAAGGCGCGAATGGAGTTGCCATCGGTGAAAGGGAATTCTTGTACG
CCGAGGGTAGACGGTGCCGGAGTCTGCATTGTACCGGCAGGTGGGGGAGG
GAACGAAGAGAAGGTGGGGCGCCGCGGCTGCCTAATTGTGACGGATACCT
CGGGGTTCGTCACGGCGCTGTTGTTGCCCTCGCTTTCGCCCGTTTTTCGA
GACCGGCACTCGTTTCCAAGCGGTGGAGGCGCCTTGCAAACAAAGGCTGA
GGGAATGTCGCAAGAATCGGTCTGCAACTTGGTTGGAGAGCTCACGATTC
AAGGCACGGCAGGGGTGAGTGTCGAGAGTGGGCGATCCGTCCGCGCGTAG
AGTGTCATACGAGAGAGTGAAAAAAGAGCCTTTGGCTGGTGAGTGAAATG
AAAAATTACAAAATACTGCAATGCCGTCGACTTGGGCCTCGTGAGGGGTC
TACTTCCCTGGCCGTTCTCCTTGGTATTTGCCTTAGTCGTCGCTGGGCGG
TGTCATTGTAATGAGTTTGTCGAACGCTCTTATGTTTTGCCAAGCTCTTG
GTCACTCCCCAAACATCCCTCTCCCCTTTGCGGCAGGAGTTGACCCGGTG
GTCGCTGCTAACGGACGAAGCGTACAGCCGGCTTATGAACTCCAAGCCTC
GGCTGATCAAAGTCTCGAAATTAGTGACGCCGATCGCGACGTCGAAGGGG
TCGCTCGCAGGACAGTCTGGCGATGGCACGGGAGGTGGGCAGTTGCAGCA
GCGCTTGCTACACCCAAGAGGCAACAGATCCTCCTCCAAGGGCGTGCTGG
GACGGTTCTCGTTGGGTGGATCGAAGAAGAGCATTTCTGACGTCTTCTCG
GTCGAACCATCTCCTAGATCGACTCTCTGGCGACAGTCCAGTGGGGAAAG
CGCTCACTCCGTCTCGTCAGGTTCTGCCGCATCAATGCACATAGAAAGGA
GCAGCGGTCACGAAGAACAAGAAGCCACCGCACATCGTCATGCTCTGTTT
GGCAAGCGAGAATCTGGTGCGGGCGGAGCCGCAGTAGTGGTGAAAACTTC
AAGTGGTCGGTCAACGGGCGGAGTCGGCAGAACGCACGACGCGCTCAGCG
AAGCGCGCGACCTGGCAGTAGAGCGGGGAGAAAAGTTGTCAAATATGGTC
GACAAATCGCGACAGCTCGAGGACAGCGCGATGGCGTTCGGTGACATGGC
CAAGCAGCTTCGGAGACATCAGCAGAAAGAGGAAGAATGTTGCTTGTCGT
AAGTCATGCACGCCTCCAAGGGATTGTTAACAAACAAAGAAACGTCTTAT
GTTTTCAGAAAAAGGGTAGACAAGAACGTTCCGAGTCTGGCAGCATTTGG
CTTTCGTGCGTAGCTTTGGCCTTTCTGGCTCGCCAGCTGAGGACCAGACT
AGTTTTTGGGAAAGAGTACACTCAAGTTTAATGGCGGTTTTAGTAACCTG
AGTCGCATTTTTTCCTTAAAACATATGCGTTCGCCAGCTCTCAACGTTGC
AGACGCTGAATCCAGGGCTATGAAGGCTGATAGCCCTCAAGAAGCGAGAA
GATCGCAATAAAGGAC back to topCoding sequence (CDS) from alignment at H-elongata_contig20764:385..6150- >mRNA_H-elongata_contig20764.5971.1 ID=mRNA_H-elongata_contig20764.5971.1|Name=mRNA_H-elongata_contig20764.5971.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=9096bp|location=Sequence derived from alignment at H-elongata_contig20764:385..6150- (Himanthalia elongata Himel1 dioecious) ATGGATTGCTTTGCCAGTCCCAAGCGCTTCGGGCACTACGGCCCGATCAA CAATGTGTGCGCTCTCTCGTACGAGCCATCGAATATGGATTGCTTTGCCA GTCCCAAGCGCTTCGGGCACTACGGCCCGATCAACAATGTGTGCGCTCTC TCGTACGAGCCATCGAATGGTCTGATCGCCGTCGCCTCACTGAAGGGTAT GGTAAAAGTATCTGGCGCGGTGGGCGTGGAGCTGGTTCTCGAAGAGGAAG GATCTCTCGAGGGCGACGACCCATTCGCCTACCTTCTCTTCCCAACGCAT CAGCTCCTAGTGGGGGTCACGCTAACAGGCGCCGTGGTAGCCTGGGATCT GATGGAAGCCCGCCGCTGCGGGAATGTTGCCCCTCCCACAAATGCGAACG GGGGAGAAGAGCGTGTGACGGCCGCGCACTGCCCCGGCCCGCCACCAAGC GCTTCGGATGCCTCTTCGAAGGGGATATACGTTTTCTTGGGCCTCCAAAG TGGCAGGGTTCTAGTGGCGCAGGTTCTCCCCGTATGCCGAGTGTCTGGGT ACGCGGTGGAGCCCTGTGACCTTGCCGCCAGGGCGCCCGAGGAGTTTCTT GCGCCGGGCGTCGTTGGGGCAGGCCTCGGAGCGGTCACCTCCATCGCTTC GTCATTTGCGAGCGAGGAGGTCGCTCTCTTCGGCCACCAGCACGGGGGCA TCGTCCTGTGGGACTGGATACGGCGGAAAAAACTCGCTTTGCGAGGTCTG GCGCCTGGCGGTGACGGAACGGGTAACGAGCCAGACGGTGAAGTAACGTG CTTGTCATTTCACCCCGACGGGGGAGCTTTTGCCGCTGGGTTCGAGTCAG GCTGCTATGCGGTTTTCCCCAGCTCTTCCATCCACGATTCCGCGCTAACG CCGCGCCGCTGGGTTTGCGAAGTGGGGGATGACGGCTCTTGCCCCCGCGA AGGGTCCACGATCGTGCGAACGGCCGTTTCTTTGGTAGAGTGGATTAGCG TGCGCGGTGGCGGCGGCGGAGACAAAAAAACGTGGGGTTTGCTCGTTGCG GGAGGCGTTGAGATGGAAGAGGGTGAGGAGCCTGACGGCGTGAGCTTGCT AGTTCCCATAACCGCCTCCGCGACCGGAAGTGTTTCTGCTCATCCCTCCA AGAGTGAGGGGAAGGCGAGGACTAGAGAAAGAGACAGGGCGTCGTCGGCC TCGCTGTCCGTGTTTGCTACACTCGAGACGGTTGTGTTTGTGCCTTTCGC CGTGGGACAGGAGCGACTCTCGCACGTCCACGCCGTGGTAGTGACTGACG GTGGTGGCAGCAGTGGTAACGGAGACTTCGCGGCGACAATAACGGACACC TTGGGGAAAAGTTCTGCTTCTGGATGGGTCGCGAACTTCTCTGAGAGTTT TGAGGGTACGGCGCTAAACGATAGACAAGACAATGGCGATGGGGAAAAGA GAACGGGGGCGTCAGGAGGCGCCGCCGAAGCATCGCCCGAGGAGTCGGTC ATCGTCCTGGGACTGGTAACGTGGAACGAAGAGGTCTGGGGCGCGGGCGG TCGCTTGAGTTTTTGTCGTGAATCGTCTGTCTTGGCGTGTCCCATCCAGA CGAGCCCCTTTGCGGCACTTCTTCAGCTGGACCCCGAGAGCATCGGCAGT CATCTGTCCGGATTCGCGCGCGTGACAGCGGTGACGTCGACGCCGCTAAT GTCATCCTCCACGATCCTCGACTTCGTGACTGGTCTTGATATGGCGAGGG AAGCCGGGGTCGGGAGCGAGCCGCCATCAAAAATCTTGAGAGGCGGCGGC CTGAGATGGGCGGACGGGGTTCCTCCCCGCGCCCGGGATGAGGCGCTGTG CACTAGCGAGATGCTGATCGCGGGTCACTCGGACGGGCGAGTAACCCTTT GGGAGTGCTACGGGCCGGCTCCGCGGCAGGACAGCGTGTCGATCTCGGAG GGCCGGGTCCTCACACTCGAGATTCCTTCGGGAGCCGCGTTCCTGGGGAC CCTGACCGCGCGCGAGCTCACGGGAGGCGCAGACGAAGACGAGAGAGTCC CCGTGACAGCCCTTGATGCGTGGATGGAACGCGACCACGTCGCCGAGACG GGGCGTAACGCCTGCTGGGTGGCGGTAGGGCTCGGAAGCGGAGAAGTCTC AGTGTTCGTGTTGTCGAGCAGGATAGGCGCTGACGGGGACTCTGAAGGGG GCAGTGGAAGTGGCGACGGCGAGGGTAAAATTAAGCTCGGGGGACTCTCA CCGCTGGCGGCACGACCGGTCGAAGTCTCCGAAGTGCAGCTGAGTGGGGA CGCGATGGAGGAACATTCGGAAGGCGGAGGACCTTTGAAAAAAATTATGC GTGGGCGGGTTGGCCTAAAAGCGTTCGCCAGCGGCAGCAAGGGTGATGCC GAAGTTGACGTTGAACTGGAGGCTGCCATCGACAAGGCGCGAGAAGACGC CCGCGCTATCAAGGAAAATGAAAAGTTGAACGAACGCAGTGGATATGTGC TGGCGGATGATTTTAAAGGCATTGAAGTGGAGGAGCGGGGAGGTGCTGAA GGGCAGGATGAACAAGAGAGGAAGGTGATTGAGAAAAACAAAGATGGAGG CAACCAAGTAGAGAAGGAAACGCTGCGGCAAGAGCTTTCCGAGGCCATGA TGGACGAAGACGTGTGGAGCGCTTCCTCTGGGCCATCTCCAACACAGCCT GTCGTCGATGACGTCCCGGGGGCAGGAAATCCTCCAAGAGAAGAGCGAAA GGGCAAAAACGAACGCGTCGCCCGGAACGCGTCCCTGGTGCAGCTCGCGC TGCGCCTTCATAGCCACCCCGTCCGGTGCGTTGCGCTGTCGTTCGACACG ATCGGTTCAGCTCTTGCGCTCGTCGTGGCGGATGCGGAGGGGGTGGTCTC TATGACAAACGTCTCCACGGGCTCCGCATGTCTTCTCCCGATGCGCGCGC CGCGGATCAGGCCTTGTCTGCCAAGCATCACCATTGGACCGCTGCCGGAC GCTCTCCTTCGAGCCTCTGCGGCGCAGGCGAGCTGGAGGGGCCGAAAGCT CGGGGCGGCCGGCGCCTTGTTCGTGCTGCTGGACGGTTGGCTCAATGTAT TCGACCTCGCCTCCAGGGAACCCGTAGATATCGCACAAGTTCCAGGGCTT ACGCGAGACAGTAGTGGCGGTGGCGGAGTGTGCGGAGTTGACACCGCTCC CGCGCAAACCGCGTCGGGTGCTAGGCAGGATGTACCTGAAAGAACGTGGC TGTTCTGCATTGACGAACGCGGCGTGCCTCTTGTGCCGTACGCGTCGGAG ACCCTGAGCTTGTTCCACCCCACCCCTTCGCTCCCTGAAGCCGAACGCGG AAGCGACGTCCGTGGGGGAAATGTCGATCCAGAGAACGACGGCCTGAGCA ATCCAGCCGTGCGGACGATCTGGGTGGCGCCCCCATCCTCGAGCACGGCC CTCGACAACCACCACGAGCACGAGCTACAGGCAATGAGCGACGCCCCGAC GCCCCCGAGCTTCCTGCTCGCTGTGCGCGAGGGCGTGGCTGTTGTGGTGG CCATCGAAGAAGGGAAGGGAGCTGCCTTCCCCTTCTCGAGACGCGGCGTC GCCGACGGCGTGGACTTCGCCGCTTTCAAGGGAAGATCGGGCGCCGAGTT GGTGGTAAAGGCGCGAATGGAGTTGCCATCGGTGAAAGGGAATTCTTGTA CGCCGAGGGTAGACGGTGCCGGAGTCTGCATTGTACCGGCAGGTGGGGGA GGGAACGAAGAGAAGGTGGGGCGCCGCGGCTGCCTAATTGTGACGGATAC CTCGGGGTTCGTCACGGCGCTGTTGTTGCCCTCGCTTTCGCCCGTTTTTC GAGACCGGCACTCGTTTCCAAGCGGTGGAGGCGCCTTGCAAACAAAGGCT GAGGGAATGTCGCAAGAATCGGTCTGCAACTTGGTTGGAGAGCTCACGAT TCAAGGCACGGCAGGGGGTCTGATCGCCGTCGCCTCACTGAAGGGTATGG TAAAAGTATCTGGCGCGGTGGGCGTGGAGCTGGTTCTCGAAGAGGAAGGA TCTCTCGAGGGCGACGACCCATTCGCCTACCTTCTCTTCCCAACGCATCA GCTCCTAGTGGGGGTCACGCTAACAGGCGCCGTGGTAGCCTGGGATCTGA TGGAAGCCCGCCGCTGCGGGAATGTTGCCCCTCCCACAAATGCGAACGGG GGAGAAGAGCGTGTGACGGCCGCGCACTGCCCCGGCCCGCCACCAAGCGC TTCGGATGCCTCTTCGAAGGGGATATACGTTTTCTTGGGCCTCCAAAGTG GCAGGGTTCTAGTGGCGCAGGTTCTCCCCGTATGCCGAGTGTCTGGGTAC GCGGTGGAGCCCTGTGACCTTGCCGCCAGGGCGCCCGAGGAGTTTCTTGC GCCGGGCGTCGTTGGGGCAGGCCTCGGAGCGGTCACCTCCATCGCTTCGT CATTTGCGAGCGAGGAGGTCGCTCTCTTCGGCCACCAGCACGGGGGCATC GTCCTGTGGGACTGGATACGGCGGAAAAAACTCGCTTTGCGAGGTCTGGC GCCTGGCGGTGACGGAACGGGTAACGAGCCAGACGGTGAAGTAACGTGCT TGTCATTTCACCCCGACGGGGGAGCTTTTGCCGCTGGGTTCGAGTCAGGC TGCTATGCGGTTTTCCCCAGCTCTTCCATCCACGATTCCGCGCTAACGCC GCGCCGCTGGGTTTGCGAAGTGGGGGATGACGGCTCTTGCCCCCGCGAAG GGTCCACGATCGTGCGAACGGCCGTTTCTTTGGTAGAGTGGATTAGCGTG CGCGGTGGCGGCGGCGGAGACAAAAAAACGTGGGGTTTGCTCGTTGCGGG AGGCGTTGAGATGGAAGAGGGTGAGGAGCCTGACGGCGTGAGCTTGCTAG TTCCCATAACCGCCTCCGCGACCGGAAGTGTTTCTGCTCATCCCTCCAAG AGTGAGGGGAAGGCGAGGACTAGAGAAAGAGACAGGGCGTCGTCGGCCTC GCTGTCCGTGTTTGCTACACTCGAGACGGTTGTGTTTGTGCCTTTCGCCG TGGGACAGGAGCGACTCTCGCACGTCCACGCCGTGGTAGTGACTGACGGT GGTGGCAGCAGTGGTAACGGAGACTTCGCGGCGACAATAACGGACACCTT GGGGAAAAGTTCTGCTTCTGGATGGGTCGCGAACTTCTCTGAGAGTTTTG AGGGTACGGCGCTAAACGATAGACAAGACAATGGCGATGGGGAAAAGAGA ACGGGGGCGTCAGGAGGCGCCGCCGAAGCATCGCCCGAGGAGTCGGTCAT CGTCCTGGGACTGGTAACGTGGAACGAAGAGGTCTGGGGCGCGGGCGGTC GCTTGAGTTTTTGTCGTGAATCGTCTGTCTTGGCGTGTCCCATCCAGACG AGCCCCTTTGCGGCACTTCTTCAGCTGGACCCCGAGAGCATCGGCAGTCA TCTGTCCGGATTCGCGCGCGTGACAGCGGTGACGTCGACGCCGCTAATGT CATCCTCCACGATCCTCGACTTCGTGACTGGTCTTGATATGGCGAGGGAA GCCGGGGTCGGGAGCGAGCCGCCATCAAAAATCTTGAGAGGCGGCGGCCT GAGATGGGCGGACGGGGTTCCTCCCCGCGCCCGGGATGAGGCGCTGTGCA CTAGCGAGATGCTGATCGCGGGTCACTCGGACGGGCGAGTAACCCTTTGG GAGTGCTACGGGCCGGCTCCGCGGCAGGACAGCGTGTCGATCTCGGAGGG CCGGGTCCTCACACTCGAGATTCCTTCGGGAGCCGCGTTCCTGGGGACCC TGACCGCGCGCGAGCTCACGGGAGGCGCAGACGAAGACGAGAGAGTCCCC GTGACAGCCCTTGATGCGTGGATGGAACGCGACCACGTCGCCGAGACGGG GCGTAACGCCTGCTGGGTGGCGGTAGGGCTCGGAAGCGGAGAAGTCTCAG TGTTCGTGTTGTCGAGCAGGATAGGCGCTGACGGGGACTCTGAAGGGGGC AGTGGAAGTGGCGACGGCGAGGGTAAAATTAAGCTCGGGGGACTCTCACC GCTGGCGGCACGACCGGTCGAAGTCTCCGAAGTGCAGCTGAGTGGGGACG CGATGGAGGAACATTCGGAAGGCGGAGGACCTTTGAAAAAAATTATGCGT GGGCGGGTTGGCCTAAAAGCGTTCGCCAGCGGCAGCAAGGGTGATGCCGA AGTTGACGTTGAACTGGAGGCTGCCATCGACAAGGCGCGAGAAGACGCCC GCGCTATCAAGGAAAATGAAAAGTTGAACGAACGCAGTGGATATGTGCTG GCGGATGATTTTAAAGGCATTGAAGTGGAGGAGCGGGGAGGTGCTGAAGG GCAGGATGAACAAGAGAGGAAGGTGATTGAGAAAAACAAAGATGGAGGCA ACCAAGTAGAGAAGGAAACGCTGCGGCAAGAGCTTTCCGAGGCCATGATG GACGAAGACGTGTGGAGCGCTTCCTCTGGGCCATCTCCAACACAGCCTGT CGTCGATGACGTCCCGGGGGCAGGAAATCCTCCAAGAGAAGAGCGAAAGG GCAAAAACGAACGCGTCGCCCGGAACGCGTCCCTGGTGCAGCTCGCGCTG CGCCTTCATAGCCACCCCGTCCGGTGCGTTGCGCTGTCGTTCGACACGAT CGGTTCAGCTCTTGCGCTCGTCGTGGCGGATGCGGAGGGGGTGGTCTCTA TGACAAACGTCTCCACGGGCTCCGCATGTCTTCTCCCGATGCGCGCGCCG CGGATCAGGCCTTGTCTGCCAAGCATCACCATTGGACCGCTGCCGGACGC TCTCCTTCGAGCCTCTGCGGCGCAGGCGAGCTGGAGGGGCCGAAAGCTCG GGGCGGCCGGCGCCTTGTTCGTGCTGCTGGACGGTTGGCTCAATGTATTC GACCTCGCCTCCAGGGAACCCGTAGATATCGCACAAGTTCCAGGGCTTAC GCGAGACAGTAGTGGCGGTGGCGGAGTGTGCGGAGTTGACACCGCTCCCG CGCAAACCGCGTCGGGTGCTAGGCAGGATGTACCTGAAAGAACGTGGCTG TTCTGCATTGACGAACGCGGCGTGCCTCTTGTGCCGTACGCGTCGGAGAC CCTGAGCTTGTTCCACCCCACCCCTTCGCTCCCTGAAGCCGAACGCGGAA GCGACGTCCGTGGGGGAAATGTCGATCCAGAGAACGACGGCCTGAGCAAT CCAGCCGTGCGGACGATCTGGGTGGCGCCCCCATCCTCGAGCACGGCCCT CGACAACCACCACGAGCACGAGCTACAGGCAATGAGCGACGCCCCGACGC CCCCGAGCTTCCTGCTCGCTGTGCGCGAGGGCGTGGCTGTTGTGGTGGCC ATCGAAGAAGGGAAGGGAGCTGCCTTCCCCTTCTCGAGACGCGGCGTCGC CGACGGCGTGGACTTCGCCGCTTTCAAGGGAAGATCGGGCGCCGAGTTGG TGGTAAAGGCGCGAATGGAGTTGCCATCGGTGAAAGGGAATTCTTGTACG CCGAGGGTAGACGGTGCCGGAGTCTGCATTGTACCGGCAGGTGGGGGAGG GAACGAAGAGAAGGTGGGGCGCCGCGGCTGCCTAATTGTGACGGATACCT CGGGGTTCGTCACGGCGCTGTTGTTGCCCTCGCTTTCGCCCGTTTTTCGA GACCGGCACTCGTTTCCAAGCGGTGGAGGCGCCTTGCAAACAAAGGCTGA GGGAATGTCGCAAGAATCGGTCTGCAACTTGGTTGGAGAGCTCACGATTC AAGGCACGGCAGGGGAGTTGACCCGGTGGTCGCTGCTAACGGACGAAGCG TACAGCCGGCTTATGAACTCCAAGCCTCGGCTGATCAAAGTCTCGAAATT AGTGACGCCGATCGCGACGTCGAAGGGGTCGCTCGCAGGACAGTCTGGCG ATGGCACGGGAGGTGGGCAGTTGCAGCAGCGCTTGCTACACCCAAGAGGC AACAGATCCTCCTCCAAGGGCGTGCTGGGACGGTTCTCGTTGGGTGGATC GAAGAAGAGCATTTCTGACGTCTTCTCGGTCGAACCATCTCCTAGATCGA CTCTCTGGCGACAGTCCAGTGGGGAAAGCGCTCACTCCGTCTCGTCAGGT TCTGCCGCATCAATGCACATAGAAAGGAGCAGCGGTCACGAAGAACAAGA AGCCACCGCACATCGTCATGCTCTGTTTGGCAAGCGAGAATCTGGTGCGG GCGGAGCCGCAGTAGTGGTGAAAACTTCAAGTGGTCGGTCAACGGGCGGA GTCGGCAGAACGCACGACGCGCTCAGCGAAGCGCGCGACCTGGCAGTAGA GCGGGGAGAAAAGTTGTCAAATATGGTCGACAAATCGCGACAGCTCGAGG ACAGCGCGATGGCGTTCGGTGACATGGCCAAGCAGCTTCGGAGACATCAG CAGAAAGAGGAAGAATGTTGCTTGTCGTAAGAGTTGACCCGGTGGTCGCT GCTAACGGACGAAGCGTACAGCCGGCTTATGAACTCCAAGCCTCGGCTGA TCAAAGTCTCGAAATTAGTGACGCCGATCGCGACGTCGAAGGGGTCGCTC GCAGGACAGTCTGGCGATGGCACGGGAGGTGGGCAGTTGCAGCAGCGCTT GCTACACCCAAGAGGCAACAGATCCTCCTCCAAGGGCGTGCTGGGACGGT TCTCGTTGGGTGGATCGAAGAAGAGCATTTCTGACGTCTTCTCGGTCGAA CCATCTCCTAGATCGACTCTCTGGCGACAGTCCAGTGGGGAAAGCGCTCA CTCCGTCTCGTCAGGTTCTGCCGCATCAATGCACATAGAAAGGAGCAGCG GTCACGAAGAACAAGAAGCCACCGCACATCGTCATGCTCTGTTTGGCAAG CGAGAATCTGGTGCGGGCGGAGCCGCAGTAGTGGTGAAAACTTCAAGTGG TCGGTCAACGGGCGGAGTCGGCAGAACGCACGACGCGCTCAGCGAAGCGC GCGACCTGGCAGTAGAGCGGGGAGAAAAGTTGTCAAATATGGTCGACAAA TCGCGACAGCTCGAGGACAGCGCGATGGCGTTCGGTGACATGGCCAAGCA GCTTCGGAGACATCAGCAGAAAGAGGAAGAATGTTGCTTGTCGTAA back to top
|