prot_H-elongata_contig20568.5871.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20568.5871.1
Unique Nameprot_H-elongata_contig20568.5871.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
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BLAST of mRNA_H-elongata_contig20568.5871.1 vs. uniprot
Match: D7G7T3_ECTSI (GDSL-lilke lipase/acylhydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T3_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.210e-88
Identity = 138/193 (71.50%), Postives = 163/193 (84.46%), Query Frame = 0 
Query:    1 VLSIGGNDARIRFLHSRDPDVITELMVTDGLVANLRRLIEIIKADITPNIIIVYVYMPQFKMFPLLSLLPPASILQRLLVNFSKFFIEIANDHCLPVVDLSRTFDPNDRSHYGSTPIEPSNLSGQFIADLI--VKAKFRFGEETSGRVFSGTASEIKVKDLAPGAG--FSYTREFQAFLDSKKP-KNSSACVI 188
            VLSIGGNDARIRFL SR+PDV+TELM+TDG VANLRR++E I+A+ITPNII+VYVYMP+FK FPLLS+LPPA ILQRLLVNFSKFFIE+A +  LP++DLSRTFDPN++ HYGSTPIEPSN+SGQFIADL+  V A+FRFGEE  G++FSGT  E+ V DLAP A   FSY RE QAF D K   K +++CVI
Sbjct:  106 VLSIGGNDARIRFLQSRNPDVVTELMITDGFVANLRRVVETIRAEITPNIILVYVYMPEFKTFPLLSMLPPARILQRLLVNFSKFFIELAVEFHLPIIDLSRTFDPNNKKHYGSTPIEPSNVSGQFIADLVAQVLARFRFGEEAGGKIFSGTGGELVVHDLAPDAAARFSYGRELQAFFDRKAAEKPATSCVI 298
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BLAST of mRNA_H-elongata_contig20568.5871.1 vs. uniprot
Match: X6N473_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N473_RETFI)

HSP 1 Score: 68.9 bits (167), Expect = 2.040e-10
Identity = 43/132 (32.58%), Postives = 75/132 (56.82%), Query Frame = 0 
Query:    1 VLSIGGNDARIRFLHSRDPDVITELMVTD-GLVANLRRLIEIIKADITPNIIIVYVYMPQFKMFPLLSLLPPASILQRLLVNFSKFFIEIANDHCLPVVDLSRTFDPNDRSHYGSTPIEPSNLSGQFIADLI 131
            +LSIG ND R    +++ PD++ E++        N+ +++++I  D+  N+I+V  Y P    F  +       +L  +     +  + +A+ + LP++DLSRT +P +R+HY  TP +PSN S + IADLI
Sbjct:   72 ILSIGANDVRKNLKYTK-PDLVIEMLQKKVQFEENMEQIVKMIVNDLRFNLILVLAYEPHEDCFKEMLHFGREELLDVMEWTAVRM-LGLASRNGLPLMDLSRTLNPFERTHYSKTPFKPSNQSAEMIADLI 201
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20568.5871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7T3_ECTSI1.210e-8871.50GDSL-lilke lipase/acylhydrolase family protein n=2... [more]
X6N473_RETFI2.040e-1032.58Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110coord: 1..134
e-value: 1.5E-6
score: 29.8
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20568contigH-elongata_contig20568:264..2044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20568.5871.1mRNA_H-elongata_contig20568.5871.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20568 264..2044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20568.5871.1 ID=prot_H-elongata_contig20568.5871.1|Name=mRNA_H-elongata_contig20568.5871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
VLSIGGNDARIRFLHSRDPDVITELMVTDGLVANLRRLIEIIKADITPNI
IIVYVYMPQFKMFPLLSLLPPASILQRLLVNFSKFFIEIANDHCLPVVDL
SRTFDPNDRSHYGSTPIEPSNLSGQFIADLIVKAKFRFGEETSGRVFSGT
ASEIKVKDLAPGAGFSYTREFQAFLDSKKPKNSSACVIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf