prot_H-elongata_contig20547.5859.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20547.5859.1
Unique Nameprot_H-elongata_contig20547.5859.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length243
Homology
[Close]
BLAST of mRNA_H-elongata_contig20547.5859.1 vs. uniprot
Match: D7G2I3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I3_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 2.980e-86
Identity = 139/210 (66.19%), Postives = 168/210 (80.00%), Query Frame = 0 
Query:   34 SDHSRSSKNIVYRFTHGFMMEMLKRKMLYSQQDFLRARIQKLKDSLETQRRHEDLKNQTIDTGQKYKSGMLQVMKHKVTKVQAATNARKTTRRRRDTMASRALTRVSQPVQQKWGERVDWKKRKCLLMGESLYLFKEQRDKEPSEVVFLQDATAEPELGEVFKESGFRVETSLWKKGDEVVDCTEGSKRRTFTFLAECKDDKEIWLFQIR 243
            S H     N+VY FTHGFMMEML+ KML SQ + L+  IQKLKD LETQ+RHE  KNQTID  QK K+G L VMK+KVT  QAATNAR++TRRR++++ SRA+ RV +PVQQKW E +DWKKR CLL GESL LF + +D EPS++V+L+ ATAEPELG+ FK+S FRVET+ WKKGDEVVD   G++RRTFTFLAE KDDKE+WL+QIR
Sbjct:   32 SRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVD---GTERRTFTFLAESKDDKELWLYQIR 238
[Close]
BLAST of mRNA_H-elongata_contig20547.5859.1 vs. uniprot
Match: A0A6H5JJ45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ45_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.080e-79
Identity = 147/270 (54.44%), Postives = 182/270 (67.41%), Query Frame = 0 
Query:    6 FLVEVQGEQAQDVIETEGCGRSKL--------------------------------NQTESDHSRSSKNIVYRFTHGFMMEMLKRKMLYSQQDFLRARIQKLKDSLETQRRHEDLKNQTIDTGQKYKSGMLQVMKHKVTKVQAATNARKTTRRRRDTMASRALTRVSQPVQQKWGERVDWKKRKCLLMGESLYLFKEQRDKEPSEVVFLQDATAEPELGEVFKESGFRVETSLWKKGDEVVDCTEGSKRRTFTFLAECKDDKEIWLFQIR 243
            FLVEVQG  A  VI+ EG  R  +                                 +  S H     N+VY FTHGFM EML+ KML SQ + L+  IQKLKD LETQ+RHE+ KN+TID   K+K G L VMKHKVT  QAATNAR++TRRR++++ SRA+ +V +PVQQKW E VDWKKR C+L GESL LF + +D EPS++V+L  ATAEPELG+ FKES FRVET+ WKKGD++VD   G++RRTFTFLAE KDD+E+WL+QIR
Sbjct:  274 FLVEVQGAPASVVIKEEGWARPSIAAARGMSLDRSSGRVGDGKSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFMREMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEEFKNETIDKSHKHKEGTLSVMKHKVTMSQAATNARESTRRRKNSVTSRAMRKVKRPVQQKWTEAVDWKKRSCILTGESLSLFSDPKDTEPSQIVYLTGATAEPELGQAFKESAFRVETNKWKKGDDLVD---GTERRTFTFLAESKDDRELWLYQIR 540
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20547.5859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I3_ECTSI2.980e-8666.19PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JJ45_9PHAE1.080e-7954.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 141..243
e-value: 1.5E-9
score: 40.0
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 147..242
e-value: 3.7E-8
score: 33.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 129..243
score: 8.08
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 147..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20547contigH-elongata_contig20547:263..4306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20547.5859.1mRNA_H-elongata_contig20547.5859.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20547 263..4306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20547.5859.1 ID=prot_H-elongata_contig20547.5859.1|Name=mRNA_H-elongata_contig20547.5859.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
MLSSRFLVEVQGEQAQDVIETEGCGRSKLNQTESDHSRSSKNIVYRFTHG
FMMEMLKRKMLYSQQDFLRARIQKLKDSLETQRRHEDLKNQTIDTGQKYK
SGMLQVMKHKVTKVQAATNARKTTRRRRDTMASRALTRVSQPVQQKWGER
VDWKKRKCLLMGESLYLFKEQRDKEPSEVVFLQDATAEPELGEVFKESGF
RVETSLWKKGDEVVDCTEGSKRRTFTFLAECKDDKEIWLFQIR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain