prot_H-elongata_contig20499.5843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20499.5843.1
Unique Nameprot_H-elongata_contig20499.5843.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
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BLAST of mRNA_H-elongata_contig20499.5843.1 vs. uniprot
Match: D7FHV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV7_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.430e-26
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 0 
Query:    1 HNNFSDSVFLAPRIMRKMKNGGNMDFVAFIDQVSRLSLCALELFLRKRTEGVHLDRSQPLSNDLSSALIGADLVAVFPEARVRRGCAGGILPS 93
            H NFSDS   AP  +RK++  G++D V FIDQV+RL+LCALE+FLR+RT      ++ P   DL S ++G DL   FPEARV+R CAGG++PS
Sbjct:    6 HTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALEIFLRRRTSSGDAAKT-PAPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPS 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20499.5843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHV7_ECTSI1.430e-2653.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20499contigH-elongata_contig20499:2908..3517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20499.5843.1mRNA_H-elongata_contig20499.5843.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20499 2908..3517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20499.5843.1 ID=prot_H-elongata_contig20499.5843.1|Name=mRNA_H-elongata_contig20499.5843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
HNNFSDSVFLAPRIMRKMKNGGNMDFVAFIDQVSRLSLCALELFLRKRTE
GVHLDRSQPLSNDLSSALIGADLVAVFPEARVRRGCAGGILPSTEMST*
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