prot_H-elongata_contig204898.5837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig204898.5837.1
Unique Nameprot_H-elongata_contig204898.5837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.980e-22
Identity = 57/127 (44.88%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 FLKYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDC-ECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKR 126
            F + S+A+YD P   +  KVR L+ EV+E +LYGCVTW   P  + KLR  H   LL C+      R   D   LSY + L+   C E +EA V KR L +A  VARM D+RLP I + GE+ GG R
Sbjct:  156 FRRNSQAMYDRPGGPLRLKVRLLQAEVVETLLYGCVTWNLKPAEYRKLRSAHHFFLLRCIG--WKKRERKD-RPLSYAKALITAGCDESVEATVRKRRLCFAGFVARMRDERLPKIALLGELQGGAR 279          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 86.7 bits (213), Expect = 1.660e-18
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   23 LKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGG 124
            LK EV+E +LYGCVTWT +  +F KLR  H  +LL  +      R   D+  LSY + L  T CE +E  + KR L +A  V R H+ RLP+ +M G + GG
Sbjct:    2 LKAEVIETLLYGCVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRT--DHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTIAGG 101          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.500e-18
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 0
Query:    3 KYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGG 124
            +Y R ++D P      K+R L+ E +E +LYGC+TW+   G++  LR  H  +LL  +      R    Y  LSY ++L R +C+ +EA + ++ L +A  + R  D RLP  +M GE+ GG
Sbjct:  387 RYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGY---KRKKDTYRQLSYAQMLKRVECQRVEATIRQQRLLFAGALERQSDGRLPKRLMFGELAGG 505          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6H5L7R3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.340e-17
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    8 VYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGG 124
            ++D P +    K+R L+ + +EV+LYGC+TW+   G++  LR  H  +LL  +      R    Y  LSY + L R  C+ +EA + +R L +A  +AR  D RLP  +M GE+ GG
Sbjct:  212 LFDRPKVPFRVKIRLLQAKAIEVLLYGCMTWSPLCGHYQTLRSIHHRLLLRVIGY---KRKKDTYRQLSYAQTLKRVGCQSVEATIRQRRLLFARALARQPDGRLPKRLMLGELAGG 325          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6H5JN79_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN79_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.890e-13
Identity = 48/126 (38.10%), Postives = 68/126 (53.97%), Query Frame = 0
Query:    5 SRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRG 129
            S ++YD        K+R L+ E +E++LYGC +W+ +  +  KL   HR  L  C+    S R   D   LSY + L++  CE  +EA V KR L +A  V RM D+RLP  ++ G M GG   RG
Sbjct:  547 SASMYDRRRAERQLKIRLLQAEEVEILLYGCASWSPTAEHDTKLNGPHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRG 669          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6S7K883_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K883_PARCT)

HSP 1 Score: 66.6 bits (161), Expect = 4.160e-10
Identity = 40/129 (31.01%), Postives = 63/129 (48.84%), Query Frame = 0
Query:    8 VYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKRLE 136
            V+ +  I +  K+   KV V+  +LYG  TWT    +  KL    +  L   +      +         + EVL R  C  +E+ + KR L +A  + RM D+RLP I+++GE+  G R  G+P KR +
Sbjct:  214 VWKSHDIKLETKIALFKVVVISTLLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYK 335          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A8C5PP25_9ANUR (Reverse transcriptase domain-containing protein n=10 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PP25_9ANUR)

HSP 1 Score: 66.2 bits (160), Expect = 6.510e-10
Identity = 43/136 (31.62%), Postives = 65/136 (47.79%), Query Frame = 0
Query:    1 FLKYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKRLE 136
            F +  + V+D   I    K++  +  VL  +L+GC TWT    +  KL   H   L   L      +  PD       EVL+R D   +   + +  L +A  VARM D+RLP +++ GE+  GKR +G   KR +
Sbjct:  745 FGRLRKNVWDRRGIRQKTKIKVYRAAVLSTLLHGCETWTIYQRHAKKLNHFHTTSLRKLLGIKWQDKV-PD------TEVLVRADLPSIFTILAQSQLRWAGHVARMKDNRLPKMLLFGELTQGKRSQGGQKKRYK 873          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6S7JKI9_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JKI9_PARCT)

HSP 1 Score: 65.5 bits (158), Expect = 7.650e-10
Identity = 40/136 (29.41%), Postives = 64/136 (47.06%), Query Frame = 0
Query:    1 FLKYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKRLE 136
            F +    V+ +  I +  K+   K  V+  +LYG  TWT    +  KL    +  L   +      +         + EVL R  C  +E+ + KR L +A  + RM D+RLP I+++GE+  G R  G+P KR +
Sbjct:  140 FERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYK 268          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A7D9M5G6_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5G6_PARCT)

HSP 1 Score: 65.5 bits (158), Expect = 1.170e-9
Identity = 40/136 (29.41%), Postives = 64/136 (47.06%), Query Frame = 0
Query:    1 FLKYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKRLE 136
            F +    V+ +  I +  K+   K  V+  +LYG  TWT    +  KL    +  L   +      +         + EVL R  C  +E+ + KR L +A  + RM D+RLP I+++GE+  G R  G+P KR +
Sbjct:  493 FERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKLEAFQQRSLRSIMRVKWEEKTP-------HSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYK 621          
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Match: A0A6S7JBE9_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JBE9_PARCT)

HSP 1 Score: 63.9 bits (154), Expect = 3.690e-9
Identity = 39/127 (30.71%), Postives = 61/127 (48.03%), Query Frame = 0
Query:    8 VYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRETHRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHYADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKR 134
            V+ +  I +  K+   K  V+  +LYG  TWT    +  KL    +  L   +      +         + EVL R  C  +E+ + KR L +A  + RM D+RLP I+++GE+  G R  G+P KR
Sbjct:  230 VWKSHDIKLETKIGLFKAVVISTLLYGGETWTLYARHIKKLEVFQQRSLRSIMRVNWEEKTP-------HSEVLERAKCCSIESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKR 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig204898.5837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K2J8_9PHAE2.980e-2244.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AA1A1FE1.660e-1843.14hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5KBT2_9PHAE3.500e-1835.25Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L7R3_9PHAE2.340e-1736.75Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JN79_9PHAE2.890e-1338.10Reverse transcriptase domain-containing protein n=... [more]
A0A6S7K883_PARCT4.160e-1031.01RNA-directed DNA polymerase from mobile element jo... [more]
A0A8C5PP25_9ANUR6.510e-1031.62Reverse transcriptase domain-containing protein n=... [more]
A0A6S7JKI9_PARCT7.650e-1029.41Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A7D9M5G6_PARCT1.170e-929.41RNA-directed DNA polymerase from mobile element jo... [more]
A0A6S7JBE9_PARCT3.690e-930.71Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig204898contigH-elongata_contig204898:65..490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig204898.5837.1mRNA_H-elongata_contig204898.5837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig204898 65..490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig204898.5837.1 ID=prot_H-elongata_contig204898.5837.1|Name=mRNA_H-elongata_contig204898.5837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
FLKYSRAVYDNPYIAVADKVRFLKVEVLEVMLYGCVTWTFSPGNFDKLRE
THRGMLLGCLNAYTSTRAAPDYHMLSYLEVLLRTDCECMEAAVMKRILHY
ADRVARMHDDRLPNIVMHGEMVGGKRKRGQPAKRLERRVTE*
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