prot_H-elongata_contig204660.5828.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig204660.5828.1
Unique Nameprot_H-elongata_contig204660.5828.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig204660.5828.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.290e-22
Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 0
Query:    1 YLEKAKSYIENLAEAKLSVEDIKGIWVSDDDKNVISEVKEICFEFFPYVEMERVVWISGRESKNLSSTDLVPTRAHNMNYEAYVLFFAERTMLAQGDVFVGTFSSNVARMIMLLREMNGLPRSSCLSVDHPTWSPGR 137
            YL KA +Y+ +     ++  +I GIWVS DD+ V  EVK++  EFFP +    V++++G +        L+   A   +YEA V   AE  MLA   VF GTFSSNV RM+ L+R+   +P  S +SVD P W  GR
Sbjct:   28 YLAKAVNYLASPTN-DMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGGKP-----VQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLNMPDESAVSVDFPAWFAGR 158          
BLAST of mRNA_H-elongata_contig204660.5828.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.930e-21
Identity = 52/130 (40.00%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 YLEKAKSYIENLAEAKLSVEDIKGIWVSDDDKNVISEVKEICFEFFPYVEMERVVWISGRESKNLSSTDLVPTRAHNMNYEAYVLFFAERTMLAQGDVFVGTFSSNVARMIMLLRE-MNGLPRSSCLSVD 129
            YL  A  + +N  +A    +DI+ IWV+ DD  V+ EV+ I  ++FP V  E +VW+SG      +    V T   +  Y+ +V+ FA+  MLA G +FVGT++SNV+R++ LLRE ++G  R SC+S+D
Sbjct:  162 YLSAAARFFDN--KASQDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGG-----ARGGAVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284          
BLAST of mRNA_H-elongata_contig204660.5828.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.030e-20
Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 0
Query:    1 YLEKAKSYIENLAEAKLSVEDIKGIWVSDDDKNVISEVKEICFEFFPYVEMERVVWISGRESKNLSSTDLVPTRAHNMNYEAYVLFFAERTMLAQGDVFVGTFSSNVARMIMLLREMNGLP-RSSCLSVDHPTWSPGR 137
            YLE A  ++E   +++LSV DIKGIWV+ D+  VI++VK+I  ++ P V    + W SG         +   TR     Y  +V  FA+   L   D+FVGTFSSN+ R+++LLRE  GL  R+S +S+D P W  GR
Sbjct:  303 YLETAVEFLEG-NDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGG-PEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSIDGP-WRAGR 437          
BLAST of mRNA_H-elongata_contig204660.5828.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.380e-19
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    1 YLEKAKSYIENLAEAKLSVEDIKGIWVSDDDKNVISEVKEICFEFFPYVEMERVVWISGRESKNLSSTDLVPTRAHNMNYEAYVLFFAERTMLAQGDVFVGTFSSNVARMIMLLREMNGLP-RSSCLSVDHPTWSPGR 137
            YLE A  ++E   +++LSV DIKGIWV+ D+  VI++VK+I  ++ P V  + + W SG             TR     Y  +V   A+   L   D+FVGTFSSN+ R+++LLRE  GL  R+S +S+D P W  GR
Sbjct:  311 YLEAAVEFLEG-DDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGG-PEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGP-WRAGR 445          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig204660.5828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LU00_ECTSI1.290e-2240.88Similar to putative alpha-6-fucosyltransferase n=1... [more]
A0A6H5LR29_9PHAE1.930e-2140.00GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5JTL0_9PHAE1.030e-2041.30GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G435_ECTSI1.380e-1940.58Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 1..138
e-value: 1.4E-10
score: 42.8
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 1..129
score: 16.448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig204660contigH-elongata_contig204660:204..1013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig204660.5828.1mRNA_H-elongata_contig204660.5828.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig204660 204..1013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig204660.5828.1 ID=prot_H-elongata_contig204660.5828.1|Name=mRNA_H-elongata_contig204660.5828.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
YLEKAKSYIENLAEAKLSVEDIKGIWVSDDDKNVISEVKEICFEFFPYVE
MERVVWISGRESKNLSSTDLVPTRAHNMNYEAYVLFFAERTMLAQGDVFV
GTFSSNVARMIMLLREMNGLPRSSCLSVDHPTWSPGRHFLATT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027350GT23_dom