prot_H-elongata_contig20443.5817.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20443.5817.1
Unique Nameprot_H-elongata_contig20443.5817.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length337
Homology
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126X1D3_9PHAE (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126X1D3_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.620e-42
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQPGRSILPLPIVDTKVDVDSIGANNTSASVTYIAQHLPKAQTAG 131
            MSASVK PVYTSVVHR LQHHNW++ E+DF +DDLGLDL ++S I+GFLMNEP DS G FYPP  SE DP+VK EPM  EE+N PRPQ G+   P   +DTKVD+  +   NT+   T  +Q  PK QT+G
Sbjct:    1 MSASVKPPVYTSVVHRKLQHHNWREAEIDFQADDLGLDLTDISAISGFLMNEPPDSSGHFYPPWVSELDPVVKPEPMIFEESNHPRPQSGQLAPPTLTMDTKVDMSLLNTTNTTTRGTPSSQRGPKVQTSG 131          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: C5NSW5_9PHAE (Aureochrome2-like protein n=1 Tax=Fucus evanescens TaxID=87147 RepID=C5NSW5_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.470e-38
Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDP--------LVKAEPMALEENNSPRPQPGRSILPLPIVDTKVDVDS--IGANNTSASVTYIAQHLPKAQ 128
            MSASVKAPVYTSVVHR LQHHNWQ T+VD H DD  LDL ELSGIAGFLMNE  D+LGL +PP TSE +         +VKAEPM +E +NSPRPQPGRS+    ++ T+ D  +  +GA NTS  VT +AQ  P A+
Sbjct:    1 MSASVKAPVYTSVVHRKLQHHNWQGTDVDCHLDDFALDLIELSGIAGFLMNEHPDNLGLLHPPWTSEPEXXXXXXXXXVVKAEPMIVE-SNSPRPQPGRSVPTSSMLGTRADTSTFKVGAVNTSTGVTRVAQRAPTAR 137          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126WZ82_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ82_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.630e-25
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEE-NNSPRPQPGRSILPLPIVDTKVDVDSIGANNTSASVTYIA 121
            MSA+VKAPV+TS+VH  LQHH WQ T+VDF +DD+G+DL EL  ++GFLMNE  D  G FYPP   + DP+VK EP+A++      + QP   +   P + T+VD  S G N T    T +A
Sbjct:    1 MSATVKAPVFTSMVHHKLQHHGWQGTDVDF-TDDIGMDLTELQALSGFLMNETPDLSGHFYPPWVGDTDPMVKDEPVAVDPIGPRSQQQPPPRLTETPALGTRVDTSSGGKNLTDGFATNLA 121          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126X138_9PHAE (Putative LOV domain-containing protein n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A126X138_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.690e-24
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHN-WQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENN--SPRPQ 88
            MSASVKAPVYTS+VHR LQHH  WQD   D  SDDLGLDL +LS I+GFLMNE  DS G FYPP  +E +P+VK EPM L EN+  S RPQ
Sbjct:    1 MSASVKAPVYTSMVHRKLQHHTTWQDA--DLQSDDLGLDLTDLSSISGFLMNEVPDSAGHFYPPWVAEPEPIVKGEPMMLAENDPISSRPQ 89          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126WUU6_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUU6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.420e-21
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHN-WQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQPGRSILPLPIVDTKV 103
            MSA VKAPV+TS+VH  LQHH+ W +T+VDF   D+GLDLAEL  ++GFLMNE  DS G FYPP  ++ DPLVKAEP+A  +     PQ   S+    I  T V
Sbjct:    1 MSAEVKAPVFTSIVHNKLQHHSGWPETDVDFS--DIGLDLAELQNLSGFLMNETPDSTGHFYPPWANDADPLVKAEPVASGQTPDTGPQVLSSVATPAIPQTNV 102          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126WVY3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WVY3_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.070e-21
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHN-WQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQPGRSILPLPIVDTKV 103
            MSA VKAPV+TS+VH  LQHH+ W +T+VDF   D+GLDLAEL  ++GFLMNE  DS G FYPP  ++ DPLVKAEP+A  +     PQ   S+    I  T V
Sbjct:    1 MSAEVKAPVFTSIVHNKLQHHSGWPETDVDFS--DIGLDLAELQNLSGFLMNETPDSTGHFYPPWANDADPLVKAEPVASGQTPDTGPQVLSSVATPAIPQTNV 102          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: D8LE91_ECTSI (Aureochrome 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE91_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 5.680e-18
Identity = 63/131 (48.09%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHH-NWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMA--LEENNSPR-PQ------------PGRSILPL-PIVDTKVDVDSIGANNTS 114
            M ASVK PV+TS+VHR +QHH +WQD   DF  DDLGLDL +LS + GFLMNE  D+ G FYPP  +E  PLVK EP A  + +  +PR PQ            P    LP  P+ D  +DV   GA  +S
Sbjct:    1 MPASVKPPVFTSMVHRKVQHHTSWQDA--DFQPDDLGLDLTDLSTMTGFLMNEVPDNTGHFYPPWANELSPLVKDEPSAFMMPDPAAPRQPQXXXXXXXXDQRLPAPEGLPAAPVADPALDVIMGGATGSS 129          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126WUU5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUU5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 9.970e-18
Identity = 62/139 (44.60%), Postives = 80/139 (57.55%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHH-NWQDTEVDFH-SDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQP----GRSILPL-PIVDTKVDVDSIGANNTSASVTYIAQHLPKAQTAGG 132
            M ASVK+PV+TS+VHR +Q   +WQD   DFH +DD GLDL ELSGI GFLMNE  D+LG FYPP  ++  P VK EP  + E  +  PQP         P+ P+ D  +D+  +G     +     A+  PK   A G
Sbjct:    1 MPASVKSPVFTSMVHRKVQPQTSWQDA--DFHVADDFGLDLTELSGITGFLMNEVPDNLGHFYPPWANDPAPSVKDEPFMMTEPAARPPQPVXXXXXXXXPVAPVADPALDI-VMGGTGAVSVAGCTARLPPKPAKAAG 136          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126X141_9PHAE (Putative LOV domain-containing protein n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A126X141_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.970e-16
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQPGR 91
            M ASVK+P +TS+V   ++H +WQD   DFH+DD GLDLA+LS + GFLMNE  DS G FYPP  ++  PLVK EP +      P P P R
Sbjct:    1 MPASVKSPRFTSLVQHKVKHTSWQDA--DFHADDFGLDLADLSSMTGFLMNEVPDSSGHFYPPWANDPVPLVKDEPSSFM---MPEPAPAR 86          
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Match: A0A126X2Y4_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X2Y4_PETFA)

HSP 1 Score: 87.0 bits (214), Expect = 2.370e-15
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLMNEPQDSLGLFYPPLTSEHDPLVKAEPMA 78
            M ASVK+P +TS+V   ++H  WQD   DFH DD GLDLA+LS + GFL+NE  D+ G FYPP  +E  PLVK EP A
Sbjct:    1 MPASVKSPRFTSLVQHKVKHTTWQDA--DFHPDDFGLDLADLSSMTGFLLNEVPDNAGHFYPPWVNEPVPLVKDEPSA 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20443.5817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A126X1D3_9PHAE1.620e-4260.31Putative LOV domain-containing protein n=6 Tax=Sar... [more]
C5NSW5_9PHAE1.470e-3860.14Aureochrome2-like protein n=1 Tax=Fucus evanescens... [more]
A0A126WZ82_9PHAE5.630e-2549.18Putative LOV domain-containing protein n=1 Tax=Dic... [more]
A0A126X138_9PHAE4.690e-2467.03Putative LOV domain-containing protein n=1 Tax=Sac... [more]
A0A126WUU6_9PHAE1.420e-2154.81Putative LOV domain-containing protein n=1 Tax=Ish... [more]
A0A126WVY3_9PHAE3.070e-2154.81Putative LOV domain-containing protein n=1 Tax=Ish... [more]
D8LE91_ECTSI5.680e-1848.09Aureochrome 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A126WUU5_9PHAE9.970e-1844.60Putative LOV domain-containing protein n=1 Tax=Pun... [more]
A0A126X141_9PHAE2.970e-1652.75Putative LOV domain-containing protein n=1 Tax=Col... [more]
A0A126X2Y4_PETFA2.370e-1556.41Putative LOV domain-containing protein n=1 Tax=Pet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20443contigH-elongata_contig20443:588..5816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20443.5817.1mRNA_H-elongata_contig20443.5817.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20443 185..5953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20443.5817.1 ID=prot_H-elongata_contig20443.5817.1|Name=mRNA_H-elongata_contig20443.5817.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=337bp
MSASVKAPVYTSVVHRNLQHHNWQDTEVDFHSDDLGLDLAELSGIAGFLM
NEPQDSLGLFYPPLTSEHDPLVKAEPMALEENNSPRPQPGRSILPLPIVD
TKVDVDSIGANNTSASVTYIAQHLPKAQTAGGGSTLRKNASGGVTRRRSS
SKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVRTSPALQTKLASRLL
RAQRSRRSTLGRLGSFGGPHVHPARANTQEDLYDDVRDDSPLIKRTIDCN
FVPLLLAVVTCVLIVTTAHGSGMTRSPDSRDGELKCLTYFLDRLERFPAR
PSPSLFGYNIFEVCTKRFLATLSSFCCRRLAKMSTR*
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