prot_H-elongata_contig20428.5813.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20428.5813.1
Unique Nameprot_H-elongata_contig20428.5813.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
BLAST of mRNA_H-elongata_contig20428.5813.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.470e-16
Identity = 108/292 (36.99%), Postives = 138/292 (47.26%), Query Frame = 0
Query:    1 IRRVRSTVHLTGGTSAETKRRIIDLLAPAKSEV-ACTTSCSSSRPRSTAPPSSSDLTVLEEGARC-----------LEERLQNYPGALRDEDTDVDGTLNSFWKEDESIEGISEKSTGRQRQEGGRSSRFG----------------------------EVGGGSIEVGDQNRNRSXXXXXXXXXXXXXNESSGK--RPRGLFPVSICFGRPDIERFITNTVQGTAVTAEWVDTKVDS--VARKSSQPPSNYKHTPLRPIAQALVRLNTNQRISKKDLMSADLSVVKSKSAE 248
            +RRV+STV+LTG  + +TK+R++DLLAP++S+V A     S+SR  S           LE+G              L   L +Y G L+D   D +G+            G +E+ +  +  +GG  S  G                              G G  E         XXXXXXXXX      S+G+  R RG  PVS+ FGRPDI  FIT TV+GTAV A+W    VDS   A  SS P        LR   Q L RLNT QRISK+DLM ADL+VV S  A+
Sbjct:  585 LRRVKSTVYLTGKPTNKTKKRMVDLLAPSRSDVVAANAGTSTSRSSSLR---GDPACALEDGRGXXXXXXXPEVSNLNADLDDYLGVLKD---DFEGS------------GRTERGSLDRDDDGGDGSVMGYSAWGGDSILGXXXXXXXXXXXXXXXXXXXGMGRTEAAXXXXXXXXXXXXXXXXRHRGQPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWAP-PVDSRPPAPSSSSPRQQPTAGGLR---QMLTRLNTGQRISKRDLMEADLTVVDSSLAK 854          
BLAST of mRNA_H-elongata_contig20428.5813.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.440e-13
Identity = 95/281 (33.81%), Postives = 124/281 (44.13%), Query Frame = 0
Query:    1 IRRVRSTVHLTGGTSAETKRRIIDLLAPAKSEV-ACTTSCSSSRPRSTAPPSSSDLTVLEEGA-------RC--LEERLQNYPGALRDEDTDVDGTLNSFWKEDESIEGISEKSTGRQRQEGGRSSRFGEV--GGGSIEVGDQN-------------------------RNRSXXXXXXXXXXXXXNESSGK--RPRGLFPVSICFGRPDIERFITNTVQGTAVTAEWVDTKVDSVARKSSQPPSNYKHTPLRPIAQALVRLNTNQRISKKDLMSADLSVV 242
            +RRV+STV LTG  + +TK+R++DLLAP++ +V A T   S+SR  S           LE+G         C  L   L +Y G L+D   D +G+            G +E+ +     +GG  S  G    GG SI  G                            R                  S+G+  R RG  PVS+ FGRPDI  FIT TV+GTAV A+W    V+S              T    + Q L RLNT QRISK+DLM ADL+VV
Sbjct:  603 LRRVKSTVFLTGKPTNKTKKRMVDLLAPSRGDVVAATAGTSTSRSSSLR---GDPACALEDGRGGGGGGPECSNLNADLDDYLGVLKD---DFEGS------------GRTERGSLDGDDDGGDGSVMGYSAWGGDSILGGRXXXXXXXXXXXXXXXXXXMERTEAAAARRAEEERTAASKKRHLGQPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWAP-PVESRPXXXXXXXXXXXPT-AGGLRQMLTRLNTGQRISKRDLMEADLTVV 863          
BLAST of mRNA_H-elongata_contig20428.5813.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 8.150e-9
Identity = 95/286 (33.22%), Postives = 129/286 (45.10%), Query Frame = 0
Query:    1 IRRVRSTVHLTGGTSAETKRRIIDLLAPAKSEVACTTSCSSSRPRSTAPPSSSDLTVLEEGARCLEERLQNYPGALRDEDTDVDGTLNSFWKEDESIEGISEKSTGRQRQEGGRSSRFGEVGGGSIEVGDQNRNRSXXXXXXXXXXXXXNESSG--------KRPRGLFPVSICFGRPDIERFITNTVQGTAVTA--EWVDT-----KVDSVAR--------------KSSQPPSNYKH---------TPLRPIAQ-ALVRLNTNQRISKKDLMSADLSVVKSKSA 247
            +RRV STVHLTG  + +TK+R+ DLLA +K+            P +    S SD T LE G      R  ++           DG   +                                GG   ++G  + NR XXXXXXXXXXXXX             + P G  P+S+ FGRPDIE+F+T T++G++ +   +W  T     K+   A               ++S PPS  +H         T  R + +  L RLNTNQRISK+DLMSADLSVV  K++
Sbjct:  346 LRRVNSTVHLTGKPTEKTKQRLTDLLAHSKAP-----------PPAETGSSCSDPTDLEAGFAAARSRNDDFD----------DGAYGA--------------------------------GGDMEDLGGCSSNRXXXXXXXXXXXXXXXXXXXXXXXKRLRRTPFGK-PISLNFGRPDIEKFLTETIRGSSSSQHEKWAATGGPPGKIVGAAAVGDSWQPQQNASKLRASPPPSTGRHAEKERDYSDTSSRDVRKKVLARLNTNQRISKRDLMSADLSVVPGKAS 577          
BLAST of mRNA_H-elongata_contig20428.5813.1 vs. uniprot
Match: A0A6H5JAC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC5_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.190e-8
Identity = 94/291 (32.30%), Postives = 124/291 (42.61%), Query Frame = 0
Query:    1 IRRVRSTVHLTGGTSAETKRRIIDLLAPAKSEVACTTSCSSSRPRSTAPP------SSSDLTVLEEGARCLEERLQNYPGALRDEDTDVDGTLNSFWKEDESIEGISEKSTGRQRQEGGRSSRFGEVGGGSIEVGDQNRNRSXXXXXXXXXXXXXNESSGKRPRGLFPVSICFGRPDIERFITNTVQGTAVTA----EWVDT-------------------KVDSVARKSSQPPSNYKH---------------TPLRPIAQALVRLNTNQRISKKDLMSADLSVVKSKSA 247
            +RRV+STVHLTG  + +TK+R+ DLLA                  S+APP      S SD T LE G      R  ++           DG                           G      ++GG S           XXXXXXXXXXXXX     +R     P+S+ FGRPDIE+F+T  + G++ ++    EW  T                   +  S   ++S PPS  +H               T +R   + L RLNTNQRISK+DLMSADLSVV  K++
Sbjct:   17 LRRVKSTVHLTGKPTDKTKQRLTDLLA-----------------HSSAPPPVGTGSSCSDPTDLEAGFAAARSRNDDFD----------DGAY-------------------------GAGGEMEDLGGCSSNXXXXXXXXXXXXXXXXXXXXXXXXKRLRRTPFGNPISLNFGRPDIEKFLTEIIHGSSTSSSQLEEWAATGGPPGKIVGSAAVGDSWQPQQSSSKPRASPPPSTGRHAESEREYSETSSRVRTDVR--KKVLARLNTNQRISKRDLMSADLSVVPGKAS 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20428.5813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8C8_ECTSI3.470e-1636.99Putative respiratory burst oxidase protein n=1 Tax... [more]
A0A6H5JHI2_9PHAE1.440e-1333.81FAD-binding FR-type domain-containing protein n=1 ... [more]
D7G8C4_ECTSI8.150e-933.22Putative respiratory burst oxidase homolog n=1 Tax... [more]
A0A6H5JAC5_9PHAE2.190e-832.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20428contigH-elongata_contig20428:4931..6870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20428.5813.1mRNA_H-elongata_contig20428.5813.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20428 4931..6870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20428.5813.1 ID=prot_H-elongata_contig20428.5813.1|Name=mRNA_H-elongata_contig20428.5813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
IRRVRSTVHLTGGTSAETKRRIIDLLAPAKSEVACTTSCSSSRPRSTAPP
SSSDLTVLEEGARCLEERLQNYPGALRDEDTDVDGTLNSFWKEDESIEGI
SEKSTGRQRQEGGRSSRFGEVGGGSIEVGDQNRNRSRNRSRVSSRSRSSN
ESSGKRPRGLFPVSICFGRPDIERFITNTVQGTAVTAEWVDTKVDSVARK
SSQPPSNYKHTPLRPIAQALVRLNTNQRISKKDLMSADLSVVKSKSAEVS
PSPLSYSFRTHLSSPH
back to top