prot_H-elongata_contig204097.5809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig204097.5809.1
Unique Nameprot_H-elongata_contig204097.5809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.130e-55
Identity = 97/129 (75.19%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:    1 QSTQRANVGKS----RSSTGASQTPRTKR-SSTIYGMKEQSRAIKDANLEAHSPKDWTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            Q+TQR+++G S    RS T  +  PR KR ++   G KEQ+RAIKDAN+EAHSPKDWTPELT+ LRDLVDELGPKWS IA+K+PGKTATACMLHWRVG+NP+HMVKGSGTWTAEEDERLSKLVEVVGMK
Sbjct:  189 QNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGPKWSNIADKMPGKTATACMLHWRVGVNPDHMVKGSGTWTAEEDERLSKLVEVVGMK 317
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 7.340e-53
Identity = 97/129 (75.19%), Postives = 110/129 (85.27%), Query Frame = 0 
Query:    1 QSTQRANVGKS----RSSTGASQTPRTKR-SSTIYGMKEQSRAIKDANLEAHSPKDWTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            Q+TQ +++G S    RS T  +  PR KR ++   G KEQ+RAIKDAN+EAHSPKDWTPELT+ LRDLVDELGPKWS IA+K+PGKTATACMLHWRVG+NPNHMVKGSGTWTAEEDERLSKLVEVVGMK
Sbjct:  927 QNTQTSSIGSSAAKPRSPTTVATAPRNKRVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGPKWSNIADKMPGKTATACMLHWRVGVNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 1055
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A6H5KQ17_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.870e-16
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0 
Query:   34 EQSRAIKDANLEAHSPKDWTPELTQCLRDLVDELGPK----WSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEV 120
            E  +A++ A +E + P DW  E T+ L +LV++L       W +IA   P KT   C+LHWR  LN N +++G+GTW AEEDERL KL  V
Sbjct:  292 EDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPV 382
[Close]
BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 7.670e-16
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0 
Query:   34 EQSRAIKDANLEAHSPKDWTPELTQCLRDLVDELGPK----WSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEV 120
            E  +A++ A +E + P DW  E T+ L +LV++L       W +IA   P KT   C+LHWR  LN N +++G+GTW AEEDERL KL  V
Sbjct:  421 EDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPV 511
[Close]
BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: M1VG35_CYAM1 (MYB-related protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VG35_CYAM1)

HSP 1 Score: 64.7 bits (156), Expect = 1.420e-9
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:   52 WTPELTQCLRDLVDELGP-KWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            WT    Q L+ LV E GP +W+AIA K+PG+TA  C LHWR  L+P        +WT EEDE+L  LV   G +
Sbjct:  196 WTYAEDQQLKALVKEQGPGRWTAIAAKLPGRTAKDCQLHWRRCLDPRI---SRSSWTIEEDEKLKMLVSRHGRR 266
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A067U0K4_GALM3 (Uncharacterized protein n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067U0K4_GALM3)

HSP 1 Score: 64.3 bits (155), Expect = 2.210e-9
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:   52 WTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            WTP   + L +L +  GPKWSAIA +IPG+T  AC   +R  L+PN        WT EEDE L ++   +G K
Sbjct:   63 WTPSEDKMLLELYESFGPKWSAIARQIPGRTDDACSKRYREALDPNLK---KDQWTQEEDELLVEVYNRIGGK 132
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A409VXP2_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409VXP2_9AGAR)

HSP 1 Score: 63.2 bits (152), Expect = 5.560e-9
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:   52 WTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            WTP+  + L +L D LGPKWSAIA +IPG+T  AC   +R  L+P+        WT EED+ L      +G K
Sbjct:   63 WTPDEDRMLIELYDHLGPKWSAIARQIPGRTDDACSKRYREALDPSLK---KDEWTPEEDDLLIDTYNRIGGK 132
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A0C2X9A2_AMAMK (Uncharacterized protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2X9A2_AMAMK)

HSP 1 Score: 63.2 bits (152), Expect = 5.620e-9
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:   52 WTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVGMK 124
            WTP+  + L +L + LGP+WSAIA +IPG+T  AC   +R  L+P+        WT EED +L ++ + VG K
Sbjct:   66 WTPDEDRVLVELHEHLGPRWSAIAREIPGRTDDACSKRYREALDPSLK---KDEWTREEDAKLMEVYDRVGGK 135
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BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A2H4Z461_9AGAR (Putative homeodomain protein n=1 Tax=Volvariella volvacea TaxID=36659 RepID=A0A2H4Z461_9AGAR)

HSP 1 Score: 63.2 bits (152), Expect = 5.680e-9
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:   52 WTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLVEVVG 122
            WT E  + LR      GPKWSAIA +IPG+T  AC   +R  L+P+ + KGS  W+AEED RL +    +G
Sbjct:   72 WTAEEDELLRKFYMNYGPKWSAIAREIPGRTDDACSKRYREALDPS-LKKGS--WSAEEDARLQEAYSRIG 139
[Close]
BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Match: A0A8H6T7M3_MYCCL (Myb domain protein 4r1 n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6T7M3_MYCCL)

HSP 1 Score: 62.8 bits (151), Expect = 7.450e-9
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0 
Query:   51 DWTPELTQCLRDLVDELGPKWSAIAEKI-PGKTATACMLHWRVGLNPNHMVKGSGTWTAEEDERLSKLV 118
            +WT E+ Q +RD V   G  W+ +A+ + P  TA  C  HW   L+P      SGTWTAEEDERL K V
Sbjct:  221 NWTDEMDQRMRDAVGRYGQCWALVAKYVSPALTAAQCSSHWSRSLDP---ALRSGTWTAEEDERLKKAV 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig204097.5809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJZ9_ECTSI1.130e-5575.19Putative c-myb-like transcription factor n=1 Tax=E... [more]
A0A6H5JMK3_9PHAE7.340e-5375.19MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5KQ17_9PHAE6.870e-1645.05MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LH85_ECTSI7.670e-1645.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
M1VG35_CYAM11.420e-947.30MYB-related protein n=1 Tax=Cyanidioschyzon merola... [more]
A0A067U0K4_GALM32.210e-943.84Uncharacterized protein n=1 Tax=Galerina marginata... [more]
A0A409VXP2_9AGAR5.560e-943.84Uncharacterized protein n=1 Tax=Gymnopilus dilepis... [more]
A0A0C2X9A2_AMAMK5.620e-942.47Uncharacterized protein (Fragment) n=1 Tax=Amanita... [more]
A0A2H4Z461_9AGAR5.680e-946.48Putative homeodomain protein n=1 Tax=Volvariella v... [more]
A0A8H6T7M3_MYCCL7.450e-946.38Myb domain protein 4r1 n=1 Tax=Mycena chlorophos T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 48..96
e-value: 2.1E-7
score: 40.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 50..91
e-value: 2.9E-13
score: 49.8
NoneNo IPR availableGENE3D1.10.10.60coord: 39..99
e-value: 2.9E-12
score: 48.1
NoneNo IPR availablePANTHERPTHR45614:SF31MYB-LIKE PROTEIN Lcoord: 33..124
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 33..124
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 44..98
score: 15.248
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 104..122
score: 4.019
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 49..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig204097contigH-elongata_contig204097:185..1082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig204097.5809.1mRNA_H-elongata_contig204097.5809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig204097 185..1082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig204097.5809.1 ID=prot_H-elongata_contig204097.5809.1|Name=mRNA_H-elongata_contig204097.5809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
QSTQRANVGKSRSSTGASQTPRTKRSSTIYGMKEQSRAIKDANLEAHSPK
DWTPELTQCLRDLVDELGPKWSAIAEKIPGKTATACMLHWRVGLNPNHMV
KGSGTWTAEEDERLSKLVEVVGMKVRLRLFLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf