prot_H-elongata_contig20392.5804.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig20392.5804.1
Unique Name	prot_H-elongata_contig20392.5804.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	397

Homology

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: D7FMJ5_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ5_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.540e-64
Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 0

Query:  193 SPLRASGVRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLERPELTT 366
            +P     +R TDTMVLFW  PC+F+QW P  F VD VKYCSAEQYMMA KA +F D +I   I+ T DPA  K LG++V+N+D  +W+  K +F L GNY KF QNP +C++L+ATG+K++AEA+  D VWGIGMDA DPNVER ECW+G NLLGK LM VR +I  ERP+L +
Sbjct:  123 TPKVPQALRVTDTMVLFWNPPCVFTQWEPALFEVDGVKYCSAEQYMMACKANVFGDTDIWNKIMSTSDPAQQKRLGKEVANYDHGIWNLCKVQFVLTGNYSKFTQNPGMCDQLLATGDKMLAEASQHDKVWGIGMDAFDPNVERHECWRGQNLLGKILMYVRNKIRWERPDLAS 296

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: A0A6H5L2E7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E7_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 8.830e-47
Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 0

Query:  200 VRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRI 357
            VR T+ MVLFWK P  F QW P  F +D  +YC+AEQ+MMASKA LF+D   L  I+ T DP   KALGRQV  FD  +WD+      + GN  KFRQNP   +EL+ATG++++AEA+P D  WGIG+ A+D +   Q  W G N LG+ALM VR ++
Sbjct:   52 VRTTEGMVLFWKEPACFVQWTPCSFELDGERYCNAEQWMMASKARLFNDRTALQQIMATADPRRQKALGRQVRGFDPAVWDKTGYDVVVRGNLAKFRQNPGFRDELLATGDRILAEASPYDSEWGIGLKANDADALIQARWPGRNKLGEALMDVRSQL 209

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: D7G659_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G659_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.650e-46
Identity = 82/160 (51.25%), Postives = 105/160 (65.62%), Query Frame = 0

Query:  198 SGVRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRI 357
            S VR T+ MVLFWK P  F QW P  F +D  +YC+AEQ+MMASKA LF+D   L  I+ T DP   KALGRQV  FD  MWD+      + GN  KF+QNP   +EL+ATG++++AEA+P D  WGIG+ A+D +   Q  W G N LG+ALM VR ++
Sbjct:   51 SCVRTTEGMVLFWKEPACFVQWTPCSFELDGERYCNAEQWMMASKARLFNDRTALQQIMATADPRRQKALGRQVRGFDPAMWDKKGYDVVVRGNLAKFKQNPGFRDELLATGDRILAEASPYDSEWGIGLHANDADALIQARWPGRNKLGEALMDVRSQL 210

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: D7FYJ3_ECTSI (NADAR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ3_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 9.960e-46
Identity = 81/167 (48.50%), Postives = 105/167 (62.87%), Query Frame = 0

Query:  196 RASGVRE--TDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLE 360
            R  G RE  +  ++ FW+ P +FSQW P+ FVVDNV+Y  AEQYMMA KA LF D +    I+ T  P  HK LGR VS +DQ +WD+ K R    GNY KF QN  + + L+ TG K++AEA+P D VWGIG+ A +P       W+G NLLG  L +VR R++ E
Sbjct:   48 RFDGTREYVSPDLLFFWQPPSVFSQWTPSVFVVDNVQYSCAEQYMMAEKAKLFGDNSSWQKIMATPSPREHKDLGRGVSGYDQNVWDQHKMRIVARGNYAKFTQNEMMGQRLLDTGEKLLAEASPYDRVWGIGLRADNPAARTPSSWRGQNLLGDILQEVRTRMIAE 214

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: H8MLP1_CORCM (NADAR domain-containing protein n=10 Tax=Corallococcus TaxID=83461 RepID=H8MLP1_CORCM)

HSP 1 Score: 163 bits (412), Expect = 2.800e-45
Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 0

Query:  199 GVRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLERP 362
            G   T     FWK    FSQW P+ F VD V+Y  AEQYMMA KA LF D  +L  +L+   P  HKALGR+VS FD  +W+R + R    GN+ KF Q+  L E L+AT    + EA+P D +WG+G+ A DP ++    W+GLNLLGK L ++R+ +L + P
Sbjct:    2 GTTATARFTFFWKEDSFFSQWHPSVFTVDGVRYTCAEQYMMAGKARLFGDTRVLDQVLRAATPKQHKALGRKVSPFDAALWERERERIVYEGNHAKFTQHRHLLEALLATAGTELVEASPLDRIWGVGLSAEDPRIQDPSTWRGLNLLGKVLTRLREDLLAQEP 165

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: UPI001CBABE8D (NADAR family protein n=1 Tax=Corallococcus sp. EGB TaxID=1521117 RepID=UPI001CBABE8D)

HSP 1 Score: 162 bits (409), Expect = 7.330e-45
Identity = 73/160 (45.62%), Postives = 101/160 (63.12%), Query Frame = 0

Query:  199 GVRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRIL 358
            G   T     FW+   +FSQW P  FVV++V+Y  AEQYMMA KA LF D  +L  +L+   P  HKALGR+V+ FD  +W+R + R    GN+ KF Q+P L E L+AT    + EA+P D +WG+G+ A DP ++    W+GLNLLGK L ++R+ +L
Sbjct:    2 GTTTTPRFTFFWREDSVFSQWHPCVFVVEDVRYTCAEQYMMAGKARLFGDARVLEQLLRAATPKQHKALGRKVTPFDAALWERERERIVYEGNHAKFTQHPHLLEALLATRGTQLVEASPTDRIWGVGLSAEDPRIQDPASWRGLNLLGKVLTRLREDLL 161

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: A0A0H4WPI7_9DELT (GTP cyclohydrolase II n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WPI7_9DELT)

HSP 1 Score: 161 bits (407), Expect = 1.360e-44
Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 0

Query:  209 FWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLER 361
            FW+    FSQW  + F VD  +Y  AEQYMMA KA LF D  +LA IL +E P +HKALGR+V +FD   W++ + +    GN  KF QNPAL E L+AT    + EA+P D +WG+G+   DP ++    W+GLNLLGK L K+R+ +L ER
Sbjct:   12 FWRDQSPFSQWHRSAFEVDGARYVCAEQYMMAGKARLFGDTEVLAKILASESPKTHKALGRKVRHFDAAKWEQAREQIVYEGNRAKFTQNPALLEALLATAGTELVEASPMDRIWGVGLSEEDPRIQNPATWRGLNLLGKVLTKLREDLLAER 164

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: Q1D1J3_MYXXD (NADAR domain-containing protein n=14 Tax=Myxococcaceae TaxID=31 RepID=Q1D1J3_MYXXD)

HSP 1 Score: 161 bits (407), Expect = 1.690e-44
Identity = 75/159 (47.17%), Postives = 100/159 (62.89%), Query Frame = 0

Query:  202 ETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLE 360
            E      FW+    FSQW P+ F VD V+Y  AEQYMMA KA LF D   LA+IL ++ P +HKALGR+V +FD T W++ + R    GN  KF Q+P L + L+AT    + EA+P D +WG+G+D  DP +     W+GLNLLGK L K+R+ +L E
Sbjct:    5 EQQRFTFFWQAHSPFSQWHPSDFTVDGVRYVCAEQYMMAGKARLFGDNEALASILSSKSPKTHKALGRKVRDFDNTRWEKARERIVYEGNRAKFTQSPELLKALLATAGTELVEASPVDRIWGVGLDEEDPRILHPAKWRGLNLLGKVLTKLREDLLAE 163

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: A0A3A8TUM3_9DELT (NADAR family protein n=16 Tax=Corallococcus TaxID=83461 RepID=A0A3A8TUM3_9DELT)

HSP 1 Score: 158 bits (399), Expect = 2.360e-43
Identity = 73/160 (45.62%), Postives = 99/160 (61.88%), Query Frame = 0

Query:  199 GVRETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRIL 358
            G   T     FWK    FSQW P+ F V+ V+Y  AEQYMMA KA LF D  +L  +L+   P  HKALGR+VS FD  +W+R + R    GN+ KF Q+P L E L+AT    + EA+P D +WG+G+ A +P ++    W+GLNLLGK L ++R+ +L
Sbjct:    2 GTTTTARFTFFWKEDSFFSQWHPSVFTVEGVRYTCAEQYMMAGKARLFGDTRVLEQMLRAATPKQHKALGRKVSPFDAALWERERERIVYEGNHAKFTQHPHLLEALLATAGTELVEASPLDRIWGVGLSAENPLIQDPSKWRGLNLLGKVLTRLREDLL 161

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BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Match: A0A848L4X0_9DELT (NADAR family protein n=5 Tax=Myxococcaceae TaxID=31 RepID=A0A848L4X0_9DELT)

HSP 1 Score: 156 bits (395), Expect = 1.010e-42
Identity = 73/152 (48.03%), Postives = 100/152 (65.79%), Query Frame = 0

Query:  209 FWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDENILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPALCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKALMKVRKRILLE 360
            FW+    FSQW  + FVVD V+Y  AEQYMMA KA LF D  +LA+ILK+  P +HKALGR+V +FD  +W+R + R    GN  KF Q+  L + L+AT    + EA+P D +WG+G+ A DP ++    W+GLNLLGK L K+R+ ++ E
Sbjct:   12 FWREESPFSQWHRSEFVVDGVRYVCAEQYMMAGKARLFADAEVLASILKSASPKTHKALGRKVRDFDAAVWERERERIVYEGNRAKFTQDAELLKALLATRGTELVEASPLDRIWGVGLGAEDPRIQDPSKWRGLNLLGKVLTKLREDLIAE 163

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot

BLAST of mRNA_H-elongata_contig20392.5804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMJ5_ECTSI	2.540e-64	58.05	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L2E7_9PHAE	8.830e-47	51.27	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
D7G659_ECTSI	1.650e-46	51.25	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
D7FYJ3_ECTSI	9.960e-46	48.50	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
H8MLP1_CORCM	2.800e-45	45.73	NADAR domain-containing protein n=10 Tax=Coralloco...	[more]
UPI001CBABE8D	7.330e-45	45.63	NADAR family protein n=1 Tax=Corallococcus sp. EGB...	[more]
A0A0H4WPI7_9DELT	1.360e-44	48.37	GTP cyclohydrolase II n=1 Tax=Myxococcus hansupus ...	[more]
Q1D1J3_MYXXD	1.690e-44	47.17	NADAR domain-containing protein n=14 Tax=Myxococca...	[more]
A0A3A8TUM3_9DELT	2.360e-43	45.63	NADAR family protein n=16 Tax=Corallococcus TaxID=...	[more]
A0A848L4X0_9DELT	1.010e-42	48.03	NADAR family protein n=5 Tax=Myxococcaceae TaxID=3...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037238	YbiA-like superfamily	GENE3D	1.10.357.40		coord: 196..365 e-value: 4.9E-38 score: 132.1
IPR037238	YbiA-like superfamily	SUPERFAMILY	143990	YbiA-like	coord: 203..358
IPR012816	NADAR	TIGRFAM	TIGR02464	TIGR02464	coord: 207..357 e-value: 7.0E-44 score: 147.7
IPR012816	NADAR	PFAM	PF08719	DUF1768	coord: 209..357 e-value: 1.1E-46 score: 159.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig20392	contig	H-elongata_contig20392:3381..5792 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig20392.5804.1	mRNA_H-elongata_contig20392.5804.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig20392 2619..6572 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig20392.5804.1 ID=prot_H-elongata_contig20392.5804.1|Name=mRNA_H-elongata_contig20392.5804.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=397bp
MNTAPGWTGAGGGGSWPTCRYPACNANVYVEAAGGYSSEFCAPHLQQQQF
QQQQQQQYFHNLQQQQQQHFHNLQQQQYFHQEQQEGYFPNVFPQLPQMWA
GAMLPPPMTFGKGGANAGISQSPLAPIPEQPHIVLPKGPGGEEGSTFPVE
GKVNPSAPAQADLQHSTENGGRTTRHAESAATATDTTTKGRKSPLRASGV
RETDTMVLFWKTPCIFSQWVPTPFVVDNVKYCSAEQYMMASKAALFDDEN
ILAAILKTEDPASHKALGRQVSNFDQTMWDRVKSRFALMGNYQKFRQNPA
LCEELVATGNKVIAEANPRDFVWGIGMDASDPNVERQECWQGLNLLGKAL
MKVRKRILLERPELTTIFVDAVISSRVNIADSPGVPAVVNGVTVWF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037238	YbiA-like_sf
IPR012816	NADAR