prot_H-elongata_contig20355.5788.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig20355.5788.1
Unique Name	prot_H-elongata_contig20355.5788.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	93

Homology

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A6H5JKV4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV4_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.540e-46
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLA 88
            MVVPPLNF+MVS GVFRSGYPIACNF FLRRLGL+SILCLCP++VLPGSL+WA + GV ME+C+LGENSPPFVSMPLAAMR AVD+L+
Sbjct:   63 MVVPPLNFSMVSVGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLS 150

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A835YPN6_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.030e-26
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGESVR 93
            M++PPLN+AMVS GV+RSGYPIACNF FL+ L LR++LCLCP++   GSL+WA   G  + +  + +N  PFV M   A+  A+D +A    R
Sbjct:   52 MLIPPLNWAMVSPGVYRSGYPIACNFNFLKGLRLRTVLCLCPESCRRGSLEWAKSSGAALHLVSVSDNKEPFVWMDEQAVAQALDLIADPKSR 144

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A328DUZ2_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DUZ2_9ASTE)

HSP 1 Score: 85.5 bits (210), Expect = 3.140e-19
Identity = 40/93 (43.01%), Postives = 63/93 (67.74%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGESVR 93
            ++VPPLNFAMV  GVFRSG+P   NF FL+ LGLRSI+CLCP+     +L++ +  G+++    +  +  PFV++P+  +R A+  + G ++R
Sbjct:   46 LLVPPLNFAMVDYGVFRSGFPDPSNFPFLQTLGLRSIICLCPEPYPEANLEFLSSNGIQLFQFGIEGSKEPFVNIPVDMIREALKVVLGNNLR 138

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: UPI00053C4088 (probable tyrosine-protein phosphatase At1g05000 isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4088)

HSP 1 Score: 84.0 bits (206), Expect = 3.060e-18
Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 0

Query:    2 VVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGE 90
            ++PPLNFAMV +G+FRSG+P + NF FL+ LGLRS++ LCP+    G++++    G+R+    +  N  PFV++P   +R A++ L  E
Sbjct:   53 LIPPLNFAMVDNGIFRSGFPDSANFSFLQTLGLRSVIYLCPEPYPEGNMEFLKSNGIRLFQFGIEGNKEPFVNIPDDRIREALEVLLDE 141

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A2K2BMS1_POPTR (Tyrosine-protein phosphatase domain-containing protein n=7 Tax=Saliceae TaxID=238069 RepID=A0A2K2BMS1_POPTR)

HSP 1 Score: 84.3 bits (207), Expect = 3.520e-18
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 0

Query:    2 VVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAV 84
            ++PPLNFAMV +G+FRSG+P + NF FL+ LGLRSI+CLCP+     + ++  D G+R+    +     PFV++P   +R A+
Sbjct:   46 LIPPLNFAMVDNGIFRSGFPDSANFSFLQTLGLRSIICLCPEPYTEATTEFLKDGGIRLYQFGIESYKEPFVNIPQDTIREAL 128

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: UPI00053C0D78 (probable tyrosine-protein phosphatase At1g05000 isoform X1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0D78)

HSP 1 Score: 84.0 bits (206), Expect = 5.690e-18
Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 0

Query:    2 VVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGE 90
            ++PPLNFAMV +G+FRSG+P + NF FL+ LGLRS++ LCP+    G++++    G+R+    +  N  PFV++P   +R A++ L  E
Sbjct:   53 LIPPLNFAMVDNGIFRSGFPDSANFSFLQTLGLRSVIYLCPEPYPEGNMEFLKSNGIRLFQFGIEGNKEPFVNIPDDRIREALEVLLDE 141

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: UPI00125E2B9B (tyrosine-protein phosphatase DSP1-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E2B9B)

HSP 1 Score: 83.2 bits (204), Expect = 6.230e-18
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAV 84
            + VPPLNFAMV  GVFRSG+P   NF FL+ LGLRSI+CLCP+     ++++ N  G+R+    +  +  PFV++P   +R A+
Sbjct:   21 LFVPPLNFAMVDHGVFRSGFPDTANFDFLQTLGLRSIICLCPEPYPQANVEFLNANGIRLFQFGIDGSKEPFVNIPADMIREAL 104

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: UPI000901D4B5 (probable tyrosine-protein phosphatase At1g05000 isoform X2 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901D4B5)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-17
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAV 84
            + VPPLNFAMV  GVFRSG+P   NF FL+ LGLRSI+CLCP+     ++++ N  G+R+    +  +  PFV++P   +R A+
Sbjct:   21 LFVPPLNFAMVDHGVFRSGFPDTDNFDFLQTLGLRSIICLCPEPYPQANVEFLNANGIRLFQFGIDGSKEPFVNIPADMIREAL 104

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A5N5NPV0_9ROSI (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5NPV0_9ROSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.630e-17
Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 0

Query:    2 VVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAV 84
            ++PPLNFAMV +G+FRSG+P + NF FL+ LGLRSI+CLCP+     + ++  D G+R+    +     PFV++P   +R A+
Sbjct:   46 LIPPLNFAMVDNGIFRSGFPDSPNFSFLQTLGLRSIICLCPEPYTEATTEFLKDGGIRLYQFGIESYKEPFVNIPQDTIREAL 128

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BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Match: A0A484LZB4_9ASTE (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LZB4_9ASTE)

HSP 1 Score: 82.0 bits (201), Expect = 2.160e-17
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 0

Query:    1 MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSLQWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGE 90
            ++VPPLNFAMV  GVFRSG+P   NF FL+ LGLRSI+CLCP+     +L++ +  G+++    +  +  PFV++P+  +R A+  +  E
Sbjct:   36 LLVPPLNFAMVDYGVFRSGFPDPSNFPFLQTLGLRSIICLCPEPYPEANLEFLSSNGIQLFQFGIEGSKEPFVNIPVDMIREALKVVLDE 125

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot

BLAST of mRNA_H-elongata_contig20355.5788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JKV4_9PHAE	2.540e-46	81.82	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YPN6_9STRA	3.030e-26	50.54	Tyrosine phosphatase family-domain-containing prot...	[more]
A0A328DUZ2_9ASTE	3.140e-19	43.01	Uncharacterized protein n=1 Tax=Cuscuta australis ...	[more]
UPI00053C4088	3.060e-18	42.70	probable tyrosine-protein phosphatase At1g05000 is...	[more]
A0A2K2BMS1_POPTR	3.520e-18	44.58	Tyrosine-protein phosphatase domain-containing pro...	[more]
UPI00053C0D78	5.690e-18	42.70	probable tyrosine-protein phosphatase At1g05000 is...	[more]
UPI00125E2B9B	6.230e-18	46.43	tyrosine-protein phosphatase DSP1-like n=2 Tax=Ipo...	[more]
UPI000901D4B5	1.600e-17	46.43	probable tyrosine-protein phosphatase At1g05000 is...	[more]
A0A5N5NPV0_9ROSI	1.630e-17	44.58	Tyrosine-protein phosphatase domain-containing pro...	[more]
A0A484LZB4_9ASTE	2.160e-17	43.33	Tyrosine-protein phosphatase domain-containing pro...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020428	Atypical dual-specificity phosphatase Siw14-like, plant and fungi	PRINTS	PR01911	PFDSPHPHTASE	coord: 2..19 score: 61.49 coord: 39..52 score: 23.65
IPR004861	Atypical dual-specificity phosphatase Siw14-like	PFAM	PF03162	Y_phosphatase2	coord: 2..87 e-value: 3.8E-14 score: 52.6
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10		coord: 1..92 e-value: 2.7E-14 score: 55.3
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 2..88
None	No IPR available	PANTHER	PTHR31126:SF48		coord: 2..87
None	No IPR available	PANTHER	PTHR31126	FAMILY NOT NAMED	coord: 2..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig20355	contig	H-elongata_contig20355:5021..5556 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig20355.5788.1	mRNA_H-elongata_contig20355.5788.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig20355 5015..5556 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig20355.5788.1 ID=prot_H-elongata_contig20355.5788.1|Name=mRNA_H-elongata_contig20355.5788.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MVVPPLNFAMVSDGVFRSGYPIACNFRFLRRLGLRSILCLCPDNVLPGSL
QWANDVGVRMEICELGENSPPFVSMPLAAMRTAVDFLAGESVR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020428	PFA-DSPs
IPR004861	Siw14-like
IPR029021	Prot-tyrosine_phosphatase-like