prot_H-elongata_contig20307.5763.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20307.5763.1
Unique Nameprot_H-elongata_contig20307.5763.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: D7FVJ5_ECTSI (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ5_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.660e-64
Identity = 133/266 (50.00%), Postives = 162/266 (60.90%), Query Frame = 0
Query:   10 EERAREQSRLRRHERKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGKRIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSG-----SLETCGGAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            EE+ R  SR RR ERKK Q  A KTGVWDRC Y+VPGK R+CAQ+RS  S  +C THM  +   +KGKR+PCPVDPNHTVFE+QL SH+KICN+ +++A+M   PYYS+GINSG       E                           LD+AFV D++SRV+AAHR  VGE+ TEVLDPP+V ALHR    PA  D G G                       GPS   + VEMGAGKG LGQ+I+ A+P + +TMVERS+VRRK
Sbjct:   13 EEQTRADSRRRRQERKKAQLGALKTGVWDRCLYRVPGKGRYCAQHRSKHSASFCGTHMGET--AEKGKRVPCPVDPNHTVFEQQLSSHVKICNLALQQARMVAQPYYSEGINSGPPLLPGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDAFVVDLLSRVEAAHRDLVGEIPTEVLDPPEVQALHRGLVGPAGGDNGHGEN---------------------GPSV--LHVEMGAGKGTLGQSIATAFPGSDVTMVERSSVRRK 253          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A6H5KUX2_9PHAE (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX2_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.820e-54
Identity = 131/304 (43.09%), Postives = 166/304 (54.61%), Query Frame = 0
Query:    2 DTHHAKESEERAREQSRLRRHERKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGKRIPCPVDPNHTVFEKQLGSHIK--------------------------ICNVLVREAQMKELPYYSKGINSGSLETCG---------GAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            D   +K  +E+ R  SR RR ERK  Q  A +TGVW+RC Y+VPGK R+CAQ+    S  +C THM  +   +KGKR+PCPVDPNHTVFE+QL SH+K                          +CN+ +++A+M   PYYS+GINSG     G              G    +   GA      A LD+AFV D++SRV+AAHR  VGE+ TEVLDPP+V ALHR    P    G  G                    G  GPS   + VEMGAGKG LGQ+I+ A+P + +TMVERS+VRRK
Sbjct:    5 DAPRSKSIDEQTRADSRRRRQERKNAQLEALQTGVWERCLYRVPGKARYCAQH----SASFCGTHMGET--AEKGKRVPCPVDPNHTVFEQQLSSHVKRSRRVSPQAPPAAPYRTMWHVGSTTKVCNLALQQARMVTQPYYSEGINSGPPLLPGEXXXXXXXXXXXXRGDVAVVAAVGAA-----ADLDDAFVVDLLSRVEAAHRHLVGEIPTEVLDPPEVQALHRGLVGPTGAGGESGH-------------------GEDGPSV--LHVEMGAGKGTLGQSIATAFPGSDVTMVERSSVRRK 276          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A2P4X027_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X027_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.540e-29
Identity = 88/252 (34.92%), Postives = 126/252 (50.00%), Query Frame = 0
Query:   35 GVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHM-ESSPSLDKG---------KRIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSGSLETCGGAGGEGSGCAIRDNGAGDTDTDAH------LDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            G WDRC ++V  K R+C   R P S  +C  H+ +S  ++ K          +R+PCPVD +HTV+E  L  H+ +CN +     MK+LPYYS  INSG+  +  G      G A +D                 L     +D+  R+ AA+ A VGEL+ E L       L  +     K   G      RH+ QQASI+GHM K  LL  S +  FVE+GAG+G L  A++  YP++   +++R+  R K
Sbjct:   30 GQWDRCMFKVVRKNRYCNISRVPGSL-FCGNHLPDSDVAVSKKSQKFKAATRRRVPCPVDASHTVYEYDLAKHVLVCNRVKDADTMKKLPYYSHNINSGTHCSDRGDNTTSEGIAEKDEKHSTPSAQEQQGIIDKLQAIDFKDLRERIDAAYAACVGELKLEKLHHKCCDQLFEE-----KKKAGASKSVLRHIEQQASIIGHMEKVRLLEDSNA-AFVELGAGRGMLSLALAQMYPDSLYVLIDRAHTRGK 274          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A835ZI09_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI09_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.550e-28
Identity = 80/253 (31.62%), Postives = 126/253 (49.80%), Query Frame = 0
Query:   34 TGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGKRIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSG-----SLETCGGAGGEGSGCAIRDNGAGDTDTD------------------AHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVE 263
            TG WD C   V  K R+C+Q R  D+ +YC  H +     D   RIPCPVD  H++ +  L  H+KIC      + +    +YSKGINSG     S           +G A  D  +  T  D                    +   ++ D+++R++ A+  HVG +    L PP+   L    +   K+D     ++ RH++QQ+SI+GHM +RG++ P   + ++EMGAG+G LG A+ + YP++ I +V+
Sbjct:   56 TGDWDGCRMWVTRKNRYCSQPRKRDA-QYCGLHQQEV--FDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADA-VKMD----LKRMRHIVQQSSIIGHMQRRGMVQPE--HCYIEMGAGRGLLGLALGLTYPDSDILLVD 298          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: H3GHR1_PHYRM (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR1_PHYRM)

HSP 1 Score: 119 bits (297), Expect = 2.710e-27
Identity = 92/271 (33.95%), Postives = 135/271 (49.82%), Query Frame = 0
Query:   24 RKKKQQIAFKTGV-WDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGK----------RIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSGSLETCGGAGGEGSGCAIRDNGAGDTDTD-----AHLDEAFVRDVVS--------RVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            R+K+ +   K G  WDRC ++V  K RFC   R P S  +C  H+  S +    K          R+PCPVD +HTV+E  L  H+ +CN +     MK+L YYS  INSGS  +      EGS  A  +  AGD + +     A   +  +  +V+        R++AA+ + VGEL  E L       L  +     K   G      RH+ QQASI+GHM +  LL  S +  FVE+GAG+G L  A++  +P++   +++R+  R K
Sbjct:   19 RRKQAKTDAKNGAQWDRCMFKVVRKNRFCNISRVPGSL-FCGNHLPDSDAAVSSKSQKFKAATRRRVPCPVDASHTVYEFDLAKHVLVCNRVKDADAMKKLAYYSHNINSGSHSS---VKEEGS-TASSEEPAGDKENEHSEPSAQEQQGIIDKLVAIDFADLRKRIEAAYDSCVGELLLEKLQHKCCDQLFEE-----KKKAGASKSVLRHIEQQASIIGHMEQAKLLQDSNA-AFVELGAGRGMLSLALAQMFPDSLYVLIDRAHTRGK 278          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: W7TT10_9STRA (tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT10_9STRA)

HSP 1 Score: 119 bits (297), Expect = 8.920e-27
Identity = 79/249 (31.73%), Postives = 127/249 (51.00%), Query Frame = 0
Query:   38 DRCFYQVPGKQRFCAQYRSPDST------------EYCATHMESSPSLDKG--KRIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSGSLETCGGAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKV--DGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            DRC + +  K RFC   R P S             E CA    S     +G  +R+PCP+D NHTV+E++L +H+++CNV   +  +++ P+Y + INSGSL   G                        LD   V  +++R++          R E ++  Q+ +    +++ A +         K RH++QQAS++ H+ +RGLLG  ++   VE+GAG+G LG A+  A+PEA++ +VER+ VR K
Sbjct:   36 DRCAFFLKRKLRFCTVPRLPTSKWCGNHQHLEAGYENCAAAARSKTQEKRGGQRRVPCPLDSNHTVYERELSAHLRVCNVKREQKFLEDKPFYRRSINSGSLRRPG-------------------LNPQPLDVDEVPAILARIRGLQHQKQSHPRGEEVE--QITSGPVAEKILATMVAKNWTSESKARHLVQQASLISHLHRRGLLGARST--CVELGAGRGTLGHAVHQAFPEARVVLVERAGVRLK 261          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A225W5E4_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5E4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.600e-26
Identity = 93/272 (34.19%), Postives = 131/272 (48.16%), Query Frame = 0
Query:   19 LRRHERKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGK----------RIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSG----------SLETCGGAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            ++R  RK+ +  A   G WDRC ++V  K R+C   R   S  +C  H+  S +    K          R+PCPVD +HTV+E  L  H+ +CN +     MK+LPYYS  INSG          S E       E S  + ++   G  D    +D A +R    R+  A+ A VGEL  E L       L  +     K   G      RH+ QQASI+GHM K  LL  S +  FVE+GAG+G L  A++  YP++   +++R+  R K
Sbjct:   14 VQRKRRKQAKAEAKDGGEWDRCMFKVVRKNRYCNISRVSGSL-FCGNHLPDSDASKSKKSQKFKAATRRRVPCPVDSSHTVYEYDLAKHVLVCNRVKDADTMKKLPYYSHNINSGTHCSDKTESSSTEEXXXXXXEHSAPSAQEQ-QGIIDKLQAIDFADLR---KRIDTAYAACVGELTLEKLHHKCCDQLFEE-----KKKAGASKSVLRHIEQQASIIGHMEKATLLEDSNA-AFVELGAGRGMLSLALAQMYPDSLYVLIDRAHTRGK 274          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A3R7K0L9_9STRA (tRNA:m(4)X modification enzyme TRM13 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0L9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.810e-26
Identity = 88/275 (32.00%), Postives = 132/275 (48.00%), Query Frame = 0
Query:   21 RHERKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGK----------RIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSGS-------LETCGGAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRDVVS--------RVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            R  RK+ +  A + G WDRC ++V  K R+C   R P S ++C  H+  + +    K          R+PCPVD +HTV+E  L  H+ +CN +     MK LPYYS  INSGS       +E       +      ++N    +   A   +  +  +VS        R+ AA+ + VGEL  E     ++H       L  K   G      RH+ QQASI+GHM +  LL  S +  FVE+GAG+G L  A++   P++   +++R+  R K
Sbjct:   17 RKRRKQAKADAKEGGQWDRCMFKVVRKNRYCNISRVPGS-QFCGNHLPDNDAAISKKSQKFKAASRRRVPCPVDASHTVYEYDLAKHVLVCNRVKDADIMKRLPYYSHNINSGSHCTEKNSVEAPPSEVSDQENVGGKENSNEHSTPSAQEQQGIIDKLVSIDFADLRKRIDAAYESCVGELALE-----KLHHKCCDQLLQEKKAAGASKSVLRHIEQQASIIGHMEQAELLEKSNA-AFVELGAGRGMLSLALAQMLPDSLYVLIDRAHTRGK 284          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A024UNE5_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.490e-26
Identity = 84/280 (30.00%), Postives = 130/280 (46.43%), Query Frame = 0
Query:   24 RKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGK----------RIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSGSLETCGGAGGEGSGCAIRDNGAGDTDTDAHLDEAFVRD-----------------------VVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            RK+++  A K G W +C +++  K R C   R   S  YC  H+     +   K          R+PC +DP+HTV+   L  H+ ICN L     M+ LP+YS+ INSG+              A  D+ A   D   H+D+A V +                       + +++K+A+ A+V  + T+ LD     AL     L  K   G      RH+ QQASI+GHM  + LL PS  +++ E+GAG+  L  A++  YP +   +++R+  R K
Sbjct:   24 RKREKSKAMKDGEWTQCMFKLKRKNRLCNVARVEGSL-YCGNHIVDEEGVTSQKTKKHKQELCKRVPCTLDPSHTVYLFDLKKHLVICNKLKEAEAMRSLPFYSENINSGTH------------AAGSDHVAPPVDEALHVDDANVDEHSCPSSAKQASLFQTLAAMDFNSLAAKIKSAYDANVPSIPTQKLDHAACTAL-----LKEKQAAGANHSVLRHIQQQASILGHMEAKHLLRPS--HVYCELGAGRAMLSLALTQIYPSSPFVLIDRAGSRGK 283          
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Match: A0A0P1AMP5_PLAHL (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMP5_PLAHL)

HSP 1 Score: 116 bits (291), Expect = 8.010e-26
Identity = 93/280 (33.21%), Postives = 136/280 (48.57%), Query Frame = 0
Query:   19 LRRHERKKKQQIAFKTGVWDRCFYQVPGKQRFCAQYRSPDSTEYCATHMESSPSLDKGK----------RIPCPVDPNHTVFEKQLGSHIKICNVLVREAQMKELPYYSKGINSG--SLETCGGAGGEGSGCAIRDNGAGDTDTDAHLD-EAFVRDVV-------------SRVKAAHRAHVGELRTEVLDPPQVHALHRQ-DEL-PAKVDGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAISVAYPEAKITMVERSAVRRK 270
            ++R  RK+ +  A   G W RC ++V  K+R+C   R P S  +C  H+  S  L   K          R+PCPVD +HTV+E  L  H++ICN +     MK LP+YS  INSG  S++                    + D + HL+  A V+  +             SR++ A+ + VGEL +E       H  H   DEL   K   G      RH+ QQASI+GHM K  LL  +  + FVE+GAG+G L  A++  YP++   +++R+  R K
Sbjct:   14 IQRRRRKQTKIKANDDGQWGRCMFKVLRKKRYCNIARVPGSL-FCGNHLPESDVLSCKKSQKFKFSTRRRVPCPVDKSHTVYEYDLAKHVQICNRVKDADVMKNLPFYSHNINSGLHSIDK------------KEKTFEEEVDENGHLNLSAKVQQSIIDRLQAIDFANLRSRIEVAYASCVGELASE-------HLHHNCCDELFETKKTSGSSNSVLRHIKQQASIIGHMDKVKLLA-NPDSAFVELGAGRGLLSLALAQTYPDSLFVLIDRAHTRGK 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20307.5763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVJ5_ECTSI2.660e-6450.00tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectoc... [more]
A0A6H5KUX2_9PHAE3.820e-5443.09tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectoc... [more]
A0A2P4X027_9STRA3.540e-2934.92tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phyto... [more]
A0A835ZI09_9STRA1.550e-2831.62tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Tribo... [more]
H3GHR1_PHYRM2.710e-2733.95tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phyto... [more]
W7TT10_9STRA8.920e-2731.73tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Nanno... [more]
A0A225W5E4_9STRA1.600e-2634.19tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phyto... [more]
A0A3R7K0L9_9STRA2.810e-2632.00tRNA:m(4)X modification enzyme TRM13 n=3 Tax=Phyto... [more]
A0A024UNE5_9STRA6.490e-2630.00tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphan... [more]
A0A0P1AMP5_PLAHL8.010e-2633.21tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Plasm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availablePANTHERPTHR12998:SF0TRNA:M(4)X MODIFICATION ENZYME TRM13 HOMOLOGcoord: 27..270
IPR007871Methyltransferase TRM13PFAMPF05206TRM13coord: 213..270
e-value: 1.7E-6
score: 27.7
IPR021721Zinc finger, CCCH-type, TRM13PFAMPF11722zf-TRM13_CCCHcoord: 39..67
e-value: 7.9E-5
score: 22.3
IPR022776TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainPFAMPF05253zf-U11-48Kcoord: 78..102
e-value: 1.8E-8
score: 34.1
IPR022776TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainPROSITEPS51800ZF_CHHC_U11_48Kcoord: 78..105
score: 11.962
IPR039044tRNA:m(4)X modification enzyme Trm13PANTHERPTHR12998UNCHARACTERIZEDcoord: 27..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20307contigH-elongata_contig20307:55..6398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20307.5763.1mRNA_H-elongata_contig20307.5763.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20307 55..6423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20307.5763.1 ID=prot_H-elongata_contig20307.5763.1|Name=mRNA_H-elongata_contig20307.5763.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
MDTHHAKESEERAREQSRLRRHERKKKQQIAFKTGVWDRCFYQVPGKQRF
CAQYRSPDSTEYCATHMESSPSLDKGKRIPCPVDPNHTVFEKQLGSHIKI
CNVLVREAQMKELPYYSKGINSGSLETCGGAGGEGSGCAIRDNGAGDTDT
DAHLDEAFVRDVVSRVKAAHRAHVGELRTEVLDPPQVHALHRQDELPAKV
DGGPGFRKGRHVLQQASIVGHMVKRGLLGPSTSNIFVEMGAGKGALGQAI
SVAYPEAKITMVERSAVRRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007871Methyltransferase_TRM13
IPR021721Znf_CCCH-type_TRM13
IPR022776TRM13/UPF0224_CHHC_Znf_dom
IPR039044Trm13