prot_H-elongata_contig20268.5745.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20268.5745.1
Unique Nameprot_H-elongata_contig20268.5745.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5KHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.440e-17
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L   L+ + +L+RLGMGWFGG+ITR++Q RT HLYD+RV L+ + STR MKL L  Y  D  A  GSW LL
Sbjct:   38 LDNLLLQRGLLVRLGMGWFGGLITRQSQERTRHLYDYRVHLDLDQSTRGMKLQLEMYKGDPDAVVGSWILL 108          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5KA94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA94_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.530e-17
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L+ + +L+RLGMGWFGG+IT++ Q  T HLYD+ V LE + STR MKL L KYS D  AA GSW LL
Sbjct:   53 LGRLLLRRGVLVRLGMGWFGGLITQQYQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLL 123          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5K0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X8_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.850e-16
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L+ + +L+RLGMGWFGG+IT+++Q    HLYD+ V LE + STR MKL L KYS D  AA GSW LL
Sbjct:   95 LERLLLRRGVLVRLGMGWFGGLITQQSQKDIRHLYDYCVQLELHQSTRKMKLPLDKYSGDSDAAVGSWVLL 165          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5JUW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW4_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.200e-16
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   42 CHHRTLTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            C    L  +L+ + +L+ LGMGWFGG+ITR++Q RT HLYD+ + L+ + STRSMKL L  Y  D  A  GSW LL
Sbjct:   21 CTPAALDISLLQRGVLVGLGMGWFGGVITRQSQERTRHLYDYHMHLDLDQSTRSMKLPLEMYREDPDAVVGSWILL 96          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.260e-16
Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L  +L+ + +L+RLGMGWFGG+ITR++Q RT HLYD+RV L+ + STRSMKL L  Y  D  A  GSW LL
Sbjct:  568 LDNSLLQRGLLVRLGMGWFGGVITRQSQERTRHLYDYRVHLDLDRSTRSMKLPLEMYKGDPDAVVGSWILL 638          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5K5W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W3_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.500e-16
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L+ +E+L R+GMGWFGG+IT ++Q  T HLYD+ V LE + STR MK  L KYS D  AA GSW  +
Sbjct:   35 LDRLLLRREVLFRVGMGWFGGLITEQSQKDTRHLYDYCVQLELDQSTRKMKSPLDKYSGDSDAAVGSWLFI 105          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5JB97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB97_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.710e-16
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L  + +L+RLGMGWFGG+I +++Q  T HLYD+ V LE + STR MKLLL +Y+ D  AA GSW LL
Sbjct:   52 LDRLLFRRGVLVRLGMGWFGGLIIQQSQQDTRHLYDYCVQLELDQSTRKMKLLLDEYTGDPDAAVGSWVLL 122          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5JHV4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV4_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.760e-16
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L+ + +L+RLGMGWFGG+IT+++Q  T HLYD+ V LE + STR MKL L KYS D  AA GSW LL
Sbjct:  610 LDRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLL 680          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5JTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.020e-15
Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSWALL 117
            L R L+ + +L+RLGMGWF G+IT+++Q  T HLYD+ V LE + STR+MKL L KYS D  AA GSW LL
Sbjct:  224 LDRLLLRRGVLVRLGMGWFEGLITQQSQKDTRHLYDYSVQLELDQSTRTMKLPLDKYSGDSDAAGGSWVLL 294          
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Match: A0A6H5K4S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.190e-15
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   47 LTRALVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLLAKYSVDGAAAEGSW 114
            L R L+ + +L+RLGMGWFGG+IT+++Q  T HLYD+ V LE + STR MKL L KYS D  AA GSW
Sbjct:  204 LDRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSW 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20268.5745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHL7_9PHAE2.440e-1756.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA94_9PHAE3.530e-1759.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0X8_9PHAE1.850e-1657.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUW4_9PHAE2.200e-1651.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN2_9PHAE2.260e-1657.75C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K5W3_9PHAE2.500e-1654.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB97_9PHAE2.710e-1656.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHV4_9PHAE5.760e-1659.15HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JTC1_9PHAE1.020e-1557.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4S7_9PHAE2.190e-1558.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20268contigH-elongata_contig20268:6468..6923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20268.5745.1mRNA_H-elongata_contig20268.5745.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20268 6266..6923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20268.5745.1 ID=prot_H-elongata_contig20268.5745.1|Name=mRNA_H-elongata_contig20268.5745.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MVRATSRSTLMTSSTSLVRCDCSARLARRRRLLHWPSKHNLCHHRTLTRA
LVNQEILLRLGMGWFGGIITRKAQARTSHLYDFRVFLETNGSTRSMKLLL
AKYSVDGAAAEGSWALLSHCADEDSSEDSENESAFEDGEESGAVGGGSVV
RS
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