prot_H-elongata_contig202399.5730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig202399.5730.1
Unique Nameprot_H-elongata_contig202399.5730.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 2.110e-122
Identity = 176/291 (60.48%), Postives = 224/291 (76.98%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEF 291
            M+D+G+ S +LG+ + RDRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R YQ I  ++MY+AQV RYDI+YA  QL R M+KP+K HM AAKH L YLAG+ DFSITYK+GGF+LA FSD+NW NNP NG+STSS + MLANAP+SF+  LQGLTA STMEAELV +AL MKEAVFC NM+ ELGF + F  +P+Y DNT+ LH  GNR+++ R KHIALR+FF++ELV EGKISIHY  TED LAD+G KH +KHR  +++ LIN F
Sbjct:  145 MTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 1.190e-117
Identity = 175/289 (60.55%), Postives = 223/289 (77.16%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLIN 289
            M+D+G+ S  LG+ + RDRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R YQ I  ++MY+AQV RYDI+YA  QL R+M+KP+K HM AAKH L YLAG+ DFSITYK+GGF+LA FSD+NW NNP NG+STSS + MLANAP+SF+  LQGLTA STMEAELV +AL MKEAVFC NM+ ELG  + F  +P+Y DNT+ LH  GNR+++ R KHIALR+FF++ELV EGKISIHYV TED LAD+G KH +KHR  +++ LIN
Sbjct:  366 MTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 3.100e-115
Identity = 175/291 (60.14%), Postives = 224/291 (76.98%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEF 291
            M+D+G+ S +L + + RDRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R YQ I  ++MY+AQV RYDI+YA  QL R M+KP+K HM AAKH L YLAG+ DFSITYK+GGF+LA FSD+NW NNP NG+STSS + MLANAP+SF+  LQGLTA STMEAELV +AL MKEAVFC NM+ ELGF + F  +P+Y DNT+ LH  GNR+++ R KHIALR+FF++ELV EGKISIHYV+TED LAD+G KH + HR  +++ LIN F
Sbjct:  705 MTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 6.910e-110
Identity = 173/291 (59.45%), Postives = 223/291 (76.63%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEF 291
            M+D+G+ S +LG+ + RDRE  T+TISQ+ Y + +++R+G+    P  TPG G E+S  QPE+ LL+E+E R YQ I  ++MY+AQV RYDI+YA  QL R M+KP+K HM AAKH L YLAG+ DFSITYK+GGF+LA FSD+NW NNP NG+STSS + +LANAP+SF+  LQGLTA STMEAELV +AL M EAVF  NM+ ELGF + F  +P+Y DNT+ LH  GNR+++ R KHIALR+FF++ELV EGKISIHYV TED LAD+G KH +KHR  +++ LIN F
Sbjct: 1374 MTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 7.100e-103
Identity = 157/286 (54.90%), Postives = 208/286 (72.73%), Query Frame = 0
Query:    8 SRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEFKA 293
            S I G+ + RDRE+ T++IS++ Y++ ++ R+GM +C P  TPG+GP  S  QPEE LLN+EE R YQ I   ++YL+Q+ RYDI+YA +QL R M+KP+K HMGAAK    YLAG+  F I YK+GGF+L AF+D+NWGNNP NG+STSS + ML +AP++FK  LQ LT QSTME ELV AAL +KEAVFC N++ ELGF +    VPLY DNT+ LH  GNR+Y+   KHIALR+FF++ELV EG+I+IHYV  +   AD+G KHL+K R   ++ +I  F  
Sbjct:  435 SLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.070e-98
Identity = 155/262 (59.16%), Postives = 198/262 (75.57%), Query Frame = 0
Query:   30 NYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEF 291
            NYT  ++ R+GM SC P  T G GPELS+ QPEE LLN E K+ YQAI  +VMYLAQVTRYDI+Y  +Q  RAMS P+K HMGAAKHLL YL+GS DFSITYK+GGF L A S+AN G+N  NG+S SS I+M++ AP S K  LQ LTA ST+EAELV +AL MKE +FC NM+ ELGF   F S PL+ID+T+ L+V GN+T++   KH+ALR+F+++++V+EG+ISIHY+ TED LAD+G ++L+K RH  +I  I  F
Sbjct:  515 NYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 8.070e-92
Identity = 143/293 (48.81%), Postives = 202/293 (68.94%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEFKA 293
            M+DMG+V R++GI V RD E  T+ ISQ  Y  +++QRYGME  NP  TPG G ELS  QP+++LL  EEK+ +Q I  +++YLAQ TRYD+ YAV+QLTRA + PA+ HM AAKHLL YL G+ D  I YK+G FRL+ F+D+++G NP NGRST+  +  L    IS+  + Q L AQ+T+EAEL   + + +EAV+  N + E+GF ++F SVP+  D+T AL VA N  ++ R KHIALR+FF++EL +  +I++H+  +   LAD+  KHL K R   I++LI ++K 
Sbjct:    6 MTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLIKDYKC 297          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 8.560e-92
Identity = 155/271 (57.20%), Postives = 193/271 (71.22%), Query Frame = 0
Query:   20 EKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINE 290
            E   +T SQ+NY   ++ R+GM S  P  T G GPELS                  AI  +V+YLAQ+TRYDI+Y  +QL RAMS P+K HMGAAKHLL YL+GS DFSITYK+GGF L A SDANWGNNP N +S SS I+M++ AP+SFK  LQ LTA ST+EAELV AAL MKE +FC NM+ ELGF   F S PLYI NT+ LHV GN+T++ R KH+ALR+F+++E+V+EG+ISIHY+ TED LAD+G KHL+K RH  +I  I +
Sbjct:  436 EDGELTNSQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLIDKIKK 687          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.480e-89
Identity = 133/210 (63.33%), Postives = 162/210 (77.14%), Query Frame = 0
Query:   82 MYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEF 291
            MY+AQV RYDI+YA   L R M+KP+K H   AK  L YLAG+ DFSITYK+GGF+LA FSD+NW NNP NG+STSS + MLANAP+SF+  LQGLTA STMEAELV +AL MKEAVFC NM+ ELGF + F  +P+Y DNT+ LH  GNR+++ R KHIALR+FF++ELV EGKISIHY  TED LA +G KH +KHR  +++  IN F
Sbjct:    1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 6.200e-89
Identity = 144/293 (49.15%), Postives = 212/293 (72.35%), Query Frame = 0
Query:    1 MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTPGIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLTRAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNPHNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFCPNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEFKA 293
            M+DMG+V RILGI+V RD E+ T+ ISQ++Y   +++R+GM+  NP  TPG G E+S NQP++++L   +K++YQ++A +++YLAQ TR+D+ YA  QL++A S PA+ +M AAKH+L YL G+    I YK+G FRLAAF+D+++G NP NGRST+  +  LA   IS+  + Q LTAQST+EAE+   + + +EAV+  N + EL F ++FGSVP+  D+T AL VAGN  ++ R KH+ALRYFF++ELV  G+I++H+  +E QLAD+  K+L KHR  +II+ I +F  
Sbjct:  410 MTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFSC 701          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202399.5730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE2.110e-12260.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.190e-11760.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE3.100e-11560.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE6.910e-11059.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG39_9PHAE7.100e-10354.90Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE2.070e-9859.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KC04_9PHAE8.070e-9248.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE8.560e-9257.20CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMK0_9PHAE1.480e-8963.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF89_9PHAE6.200e-8949.15Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 66..260
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 66..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig202399contigH-elongata_contig202399:130..1011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig202399.5730.1mRNA_H-elongata_contig202399.5730.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig202399 130..1017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig202399.5730.1 ID=prot_H-elongata_contig202399.5730.1|Name=mRNA_H-elongata_contig202399.5730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MSDMGDVSRILGINVTRDREKRTITISQKNYTEEVVQRYGMESCNPAYTP
GIGPELSLNQPEEKLLNEEEKRLYQAIAVAVMYLAQVTRYDILYAVNQLT
RAMSKPAKAHMGAAKHLLCYLAGSADFSITYKQGGFRLAAFSDANWGNNP
HNGRSTSSCIVMLANAPISFKVELQGLTAQSTMEAELVTAALTMKEAVFC
PNMILELGFDESFGSVPLYIDNTSALHVAGNRTYNPRAKHIALRYFFVQE
LVEEGKISIHYVKTEDQLADLGIKHLSKHRHHNIIKLINEFKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like