prot_H-elongata_contig20234.5726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20234.5726.1
Unique Nameprot_H-elongata_contig20234.5726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: D8LLI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI1_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 4.860e-99
Identity = 146/175 (83.43%), Postives = 160/175 (91.43%), Query Frame = 0
Query:    2 DGGLKNTLGSSNRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYEGKF 176
            DG LKN+LGSSNRDP LVTWNYPKGW+V RPNTDTNKEAGTVSTGDYGRGDSA LFVA K+L+GGSSLS K+T+EGV+KKAL+QKG+NQFQSFKLK VK+G TD+ GNKYYIADFQYELLTGAGF VERKGVASV Q+GN+V AVVGATTA+RAKTVK QLQEIA SFR YEGKF
Sbjct:  123 DGALKNSLGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDTMEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEGKF 297          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A835Z8Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y2_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.260e-50
Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 0
Query:   13 NRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLS--DKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYEG 174
            NR+  LVTWNYP GW+  RP+ DTN E GTV+TGDY +GDSA L V    ++GG  LS  +K  VE ++ +++ QKG NQ Q+FKLK V EGAT   G +Y   +F+Y+LLTGAGFIVER G  S+ QVG  V +V+  TTA+R K ++ +LQEIA SFR Y+G
Sbjct:  117 NRETLLVTWNYPNGWITQRPSLDTNSEDGTVATGDYQKGDSAFLVVQPLDVLGGEKLSATNKALVEKLVLQSITQKGANQIQNFKLKKVTEGATGAKGQQYINVEFKYDLLTGAGFIVERVGYGSLTQVGKGVQSVMAVTTAARLKKLQPKLQEIATSFRVYDG 280          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A7S2V7M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7M0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.670e-41
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 0
Query:   14 RDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSD-KNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYEGK 175
            R P+L+++ YP  WV+ +P+  TN E+GT + G+Y +GDSAA++V    + G   ++  K+ +  ++   L QKG+NQ+Q+FK   +  GAT   G KYY+ DF+YELLTGAGF ++R+GVA+V     NV A+V ATT +R K +   L  IA+SFRAY+GK
Sbjct:  127 RPPYLISFLYPALWVIQKPSMTTNGESGTYAAGNYQKGDSAAVYVGPSEVDGNDVMAKGKDYISSIVLGGLTQKGENQYQNFKTTKIVAGATGLKGQKYYVVDFKYELLTGAGFYIDRRGVAAVTGTPKNVQAIVCATTDTRYKKLADDLHVIADSFRAYDGK 289          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: F0YP05_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP05_AURAN)

HSP 1 Score: 141 bits (356), Expect = 1.140e-38
Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    4 GLKNTLGSSNRDPFLVT-WNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYE 173
            G    L S N+D  L+  +N+P  W+V +P+ +TN E+GTVS GDYG+GDSAAL+V++    G     DK     +I K LAQKGDNQFQ+F+++ V  G+ +       + DF+YELLTGAGF VER+GVA+V+ V     A++  TT++R K ++ +L++I +SFR Y+
Sbjct:   79 GFSPVLSSVNQDQSLIVQFNHPNAWLVVKPSVNTNGESGTVSAGDYGKGDSAALYVSDLPPGG-----DKAFYAKLIAKGLAQKGDNQFQNFRVRAVSPGSPNA------VVDFEYELLTGAGFTVERRGVAAVSGVAGKSQALLAVTTSARYKKLEPELRKIVDSFRVYD 238          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A7S2RLR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLR6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.660e-37
Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 0
Query:   14 RDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSD--KNTVEGVIKKALAQKGDNQFQSFKLKGVK--EGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGN-NVAAVVGATTASRAKTVKSQLQEIANSFRAYEG 174
            +DP LVT+N P GW+V RPN D N E GTVS+GDYG+GDSAALF+     + G SL+D  K   E ++   + QKG++  Q FKL+ ++  E  T+     YY+ DF Y LLTGAGF V RKG  SV  VG+ +V A++GA+T  R K  +  L+E+A SFR Y G
Sbjct:  114 QDPLLVTYNSPSGWLVVRPNIDNNGEDGTVSSGDYGKGDSAALFIGPP--LKGGSLADQPKEYFEKLVFAGVTQKGESMVQGFKLRKIQKLEANTE---TPYYLVDFTYTLLTGAGFEVNRKGTGSVTAVGDKSVQAMIGASTDVRFKKTEPLLREVAESFRVYGG 274          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A4D9DCV0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCV0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.880e-36
Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = 0
Query:   14 RDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYEG 174
            R+  LV + YP  WVV++P+ D N E GT+S GDY +GDSAA +V      G       +    V+ +A+ QK  N +Q+FK+   + GA    G +Y I +F+YELLTGAGF V+RKGVASV QVG NV  +  ATTA+R K + +    +A+SFR Y+G
Sbjct:   62 RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVTRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 222          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: W7TXP4_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXP4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.410e-36
Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 0
Query:   14 RDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANKALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAYEG 174
            R+  LV + YP  WVV++P+ D N E GT+S GDY +GDSAA +V      G       +    V+K+A+ QK  N +Q+FK+   + GA    G +Y I +F+YELLTGAGF V+RKGVASV QVG NV  +  ATTA+R K + +    +A+SFR Y+G
Sbjct:  153 RETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 313          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A7S4MBB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBB9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.630e-36
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   12 SNRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANK-ALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAY 172
            +NR P LV + +P  WVVT P+ D N E GT+  G+YG+GD++  FV  +   V   +   K+  E V++KA++QK  N +Q+FK+K ++    +Y    Y I DFQY+L+TGAGF V+RK VASV   GN V A+  A+TA R K ++  L++IA SFR Y
Sbjct:   32 ANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTIQAGEYGKGDTSTFFVYEEPGNVADIASQPKSFFEDVLQKAISQKSANIYQNFKVKNIQPTKGEYKDQTYVIVDFQYQLVTGAGFEVDRKAVASVTSQGNAVEALWCASTAIRYKKMEPALRDIAGSFRVY 193          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A7S4MBN6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBN6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.730e-35
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   12 SNRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANK-ALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAY 172
            +NR P LV + +P  WVVT P+ D N E GT+  G+YG+GD++  FV  +   V   +   K+  E V++KA++QK  N +Q+FK+K ++    +Y    Y I DFQY+L+TGAGF V+RK VASV   GN V A+  A+TA R K ++  L++IA SFR Y
Sbjct:  111 ANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTIQAGEYGKGDTSTFFVYEEPGNVADIASQPKSFFEDVLQKAISQKSANIYQNFKVKNIQPTKGEYKDQTYVIVDFQYQLVTGAGFEVDRKAVASVTSQGNAVEALWCASTAIRYKKMEPALRDIAGSFRVY 272          
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Match: A0A7S2Y714_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y714_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.670e-34
Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 0
Query:   11 SSNRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGRGDSAALFVANK-ALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVKEGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGATTASRAKTVKSQLQEIANSFRAY 172
            S NR P LVT+N+P  WVVT P+ D N E GT+  G+Y +GD+A  FV ++   V       K   E  + K+++QKGDN +Q+FK+  ++  + D  G +Y  ADF+Y+LLTGAGF V+RKGVAS+A  G  V  +  A+TA R K  + QL++I  SFR Y
Sbjct:  113 SFNRFPILVTFNHPITWVVTIPSIDANGEDGTIQAGEYAKGDTATFFVYDEPGHVNDIHSQPKELFEKALIKSISQKGDNMYQNFKVTKLEPVSVD--GQQYMRADFKYQLLTGAGFEVDRKGVASIASEGAAVEVMWAASTAVRYKKTEQQLRDIVASFRCY 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20234.5726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI1_ECTSI4.860e-9983.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8Y2_9STRA2.260e-5054.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V7M0_9STRA5.670e-4145.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YP05_AURAN1.140e-3845.03Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S2RLR6_9STRA2.660e-3748.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DCV0_9STRA2.880e-3645.34Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXP4_9STRA3.410e-3645.96Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A7S4MBB9_9STRA3.630e-3644.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4MBN6_9STRA2.730e-3544.44Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2Y714_9STRA2.670e-3445.40Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 17..172
e-value: 3.7E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20234contigH-elongata_contig20234:3893..6256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20234.5726.1mRNA_H-elongata_contig20234.5726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20234 3083..6940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20234.5726.1 ID=prot_H-elongata_contig20234.5726.1|Name=mRNA_H-elongata_contig20234.5726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MDGGLKNTLGSSNRDPFLVTWNYPKGWVVTRPNTDTNKEAGTVSTGDYGR
GDSAALFVANKALVGGSSLSDKNTVEGVIKKALAQKGDNQFQSFKLKGVK
EGATDYAGNKYYIADFQYELLTGAGFIVERKGVASVAQVGNNVAAVVGAT
TASRAKTVKSQLQEIANSFRAYEGKFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand