prot_H-elongata_contig20216.5722.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20216.5722.1
Unique Nameprot_H-elongata_contig20216.5722.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length418
Homology
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 7.260e-88
Identity = 202/435 (46.44%), Postives = 234/435 (53.79%), Query Frame = 0
Query:    7 SRLDPLDEAYVLDLFECPDVTVIIKGLAKRLDPNLWNTRYLAERCGTVMYHNFRRFCLAEKDPGGAFVAIPEVEKAWSSMRLCDYVRYLDKRAEARRTLAIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPCVEDGGSKDNVGGDGGDPVGGISEGNGDVGGINAGMTRREEGGXXXXXXXVEQD-----------------PCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLD-EDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSG--------EDMLYRLPHGPGRKPPWPSEAAIDLLREASCFGSL 415
            +R+DPLDEAYVL LFE PDVTV+I GLA  LDP+LWNTRYL ERCG +MYH+FRRF        G FV IP  E+AWSSMRL DYVRYL+K A+A+R  A   XXXX                             XXXX               G       G  E             RR    XXXXXXX                     P M F S+DG  RT+ LL+E+VYLTDMDLTRYLPECANNL+REF MDILP G+ CAMQ+MPRESR F+GPNLYITPPGSWT  HQDGNGTVDSGHQCL GRNRVIMLRRLD E++KR AL+IL            +  G+  +P           G                               D L+R+PH  G  PPWP++ A++ LRE +   S+
Sbjct:   41 ARIDPLDEAYVLGLFERPDVTVVINGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPVREEAWSSMRLRDYVRYLNKLADAKRARATXXXXXXPADEAPSAAAAEPGQPDASVPGRNSGSVTXXXXXXXXXXXXXXXXXXAG----AKAGSQE-----------ECRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSMRFMSYDGNNRTLELLREAVYLTDMDLTRYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQCHQDGNGTVDSGHQCLAGRNRVIMLRRLDREEDKRAALRILXXXXXXXXXXXAEMNGD--KPGTPVVSHAGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXEKERDSLFRMPHCDGATPPWPTDEAVERLRELNFCPSV 458          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.230e-55
Identity = 138/406 (33.99%), Postives = 174/406 (42.86%), Query Frame = 0
Query:    2 DVCQRSRLDPLDEAYVLDLFECPDVTVIIKGLAKRLDPNLWNTRYLAERCGTVMYHNFRRFCLAEKDPGGAFVAIPEVEKAWSSMRLCDYVRYLDKRAEARRTLAIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPCVEDGGSKDNVGGDGGDPVGGISEGNGDVGGINAGMTRREEGGXXXXXXXVEQDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPGRKPPWPSEAAIDLLR 407
            DV     + P DEAY+  L + PD+TVII+GL+  L P+LW+  YL  RC  +M H  R  C   + P         +E  W SM +  Y  YL+ RA A  TL                                                G SK              S+ NG VGG    +  + +          +  P  E T   GK   V +L E +YL D DL ++LPE   +L R F +D+LP G  C  +++P    PF+GPNLYITPPG++THFHQDG+GTVDSGHQCL GRN V+MLRR+DE NKR AL+IL                                                   G    D LY  PH  G KPPWP+E  ID LR
Sbjct:  469 DVSGTPVVHPDDEAYICQLLDRPDLTVIIRGLSDGLSPHLWSIPYLRSRCRDLMVHKLR--CFRRRSPSST----ESLETEWRSMPVHSYCNYLEARAAAHETLLGLDEVDRDEWLH-----------------------------------GRSK--------------SQANGAVGGTE--VEAKTDPISAKDSEEPQSQPLFEATDSAGKKVDVPVLDEGLYLIDFDLPKHLPELFCDLERNFKVDLLPRGRRCLFRHLPLRGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHQCLRGRNEVVMLRRMDEPNKRHALRIL-------------------------------------------------CKGCPSYDALYGKPHDAGEKPPWPTETQIDELR 768          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.380e-43
Identity = 81/203 (39.90%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  213 GKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPGRKPPWPSEAAIDLLREASCFGSL 415
            G P  + +L+E +Y+ D D+ +YLPE   +LTR   +D+LP G  C ++++P    PF+GPNLYITPPG++THFHQDG+GTVDSGH CL GRN V+MLRRLDE NK RAL+IL+G                                                      D LY +PH  G+KP WP+ + I+ LR+ +   S+
Sbjct:   34 GLPMAIPVLEEGIYMIDFDVPKYLPELQADLTRHLKLDLLPRGERCMLRHLPLNGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHLCLRGRNEVVMLRRLDEPNKLRALRILNGSCLNY-------------------------------------------------DALYGMPHNDGQKPSWPTPSQIESLRDLNYCPSV 187          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S3ZG35_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZG35_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 4.050e-39
Identity = 98/301 (32.56%), Postives = 132/301 (43.85%), Query Frame = 0
Query:   28 VIIKGLAKRLDPNLWNTRYLAERCGTVMYHNFRRFCLAEKD-PGGAFVAIPEVEKAWSSMRLCDYVRYLDKRAEARRTLAIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPCVEDGGSKDNVGGDGGDPVGGISEGNGDVGGINAGMTRREEGGXXXXXXXVEQDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSG 327
            VIIKGL +RL   LWNT YL ++ G +MYH FRR+CL +     G F    E EK W SM + DY RYLD R +                                                                      +SE                           EQ P + +    G+P+ V++ +E +YL D+    Y PE   ++ +    D+LPGG  C ++Y+    RP +GPNLYI+PPG++T FH+DG+GTVDSGH CL GRN V+MLR L   NK  A+ +L G
Sbjct:   18 VIIKGLGRRLSHELWNTPYLFQKLGPMMYHRFRRYCLVDSSHTQGGFEKRYE-EKDWLSMTIGDYQRYLDAREKM---------------------------------------------------------------------LSE------------------------APKEQPPMLIYDCV-GRPQEVDVNRELIYLLDLPAQSYTPELMVDMRKRMPFDLLPGGENCLLRYVSTNGRPQMGPNLYISPPGTYTWFHEDGHGTVDSGHLCLQGRNEVVMLRGLCNSNKEVAIDVLRG 223          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A448ZRZ6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.910e-35
Identity = 82/217 (37.79%), Postives = 113/217 (52.07%), Query Frame = 0
Query:  200 VEQDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMD-ILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPG--RKPPWPSEAAIDLLREASCFG 413
             + +P   F  + GK  T+ +   ++Y+ D+D++R +P   +N    F +  +LPGGS C M  +  E+RPF+GPNLY+TPP S+THFHQDG+GTVDSGH C+ G N V+MLRRL E +K+ AL ILSG  T  D S  DG                                            LY +PHG G  +KPPWP++   D+L +    G
Sbjct:  602 AQDEPQFTFCDYQGKTHTIGVRTSALYMIDVDMSRLVPLLNDNFLESFELPAVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGYNEVVMLRRLTERHKKHALWILSGSRT--DDSHFDG--------------------------------------------LYSMPHGDGLGKKPPWPTK---DMLEDCRKMG 769          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S4EEL1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEL1_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.990e-33
Identity = 80/215 (37.21%), Postives = 107/215 (49.77%), Query Frame = 0
Query:  202 QDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMD-ILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPG--RKPPWPSEAAIDLLREASCFG 413
            ++P   F    GK  T+ +   ++Y+ D D+ R  P    N  + F +  +LPGGS C M  +  ++RPF+GPNLY+TPP S+THFHQDG+GTVDSGH C+ G N V+M RRL E +K+ AL ILSG +T                                         G   DG      LY +PHG G  +KPPWPS    D++ E    G
Sbjct:  589 EEPEFTFEDHQGKTHTLGVWTSALYMIDFDMNRLTPLLNENFLKSFELPAVLPGGSHCMMNSVTADARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVVMFRRLTERHKKHALWILSGKIT----------------------------------------EGYHFDG------LYSVPHGDGLGKKPPWPSN---DMVEECKTMG 754          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A1E7FK00_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.390e-31
Identity = 80/216 (37.04%), Postives = 109/216 (50.46%), Query Frame = 0
Query:  201 EQDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREF-MMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPG--RKPPWPSEAAIDLLREASCFG 413
            +++P   F    GK  ++ +   ++Y+ D+D+ R +P    N    F +  +LPGGS C M  +  E+RPF+GPNLY+TPP S+THFHQDG+GTVDSGH C+ G N VIMLRRL E +KR AL ILSG     +GS  +G                                            LY +PHG G   KP WP+   +D++ E    G
Sbjct:  580 KEEPMFSFEDHVGKTHSLGVWTSALYMIDVDIMRLMPLLNENFLESFELSSVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVIMLRRLTERHKRHALWILSG--KQPNGSHFEG--------------------------------------------LYSVPHGDGLGSKPKWPT---MDMVEECKRMG 746          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S1CQ01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ01_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.590e-31
Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 0
Query:  206 MEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMDILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGV 337
            M  +   G    ++ L E +YL D+ +   LP  A +L   + ++ LP GS C +Q +P + RPF+GPNLY+TPPGS+T  H+DG GT+DSGHQ + G N VIMLRR+DE  KR A++I++ D   +D  G+
Sbjct:    6 MSISDHRGVAVPLDPLFEVLYLLDLSVPAKLPNLAADLAANYGIETLPAGSNCMLQALPEKGRPFMGPNLYVTPPGSFTWTHEDGRGTLDSGHQTITGYNEVIMLRRMDEVGKRAAMRIMAADDALADTYGL 137          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: K0SGJ8_THAOC (C2H2-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGJ8_THAOC)

HSP 1 Score: 137 bits (344), Expect = 4.070e-31
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 0
Query:  208 FTSFDG--KPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMM-DILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSG 327
            FT  DG  + +TV + ++++YL D+D+ + LP+  ++L   FM+  ILPGGS C M  +    RPF+GPNLYITPP S+THFHQDG+GTVDSGH CL G N V+MLRRL E +K  AL++L+G
Sbjct:  836 FTFVDGNDETKTVKVDEDALYLLDVDMVKLLPQSFDDLKNNFMLPSILPGGSHCMMNALNVNGRPFMGPNLYITPPASFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRLTERHKYHALRLLTG 958          
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Match: A0A7S3Q867_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q867_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.180e-30
Identity = 77/198 (38.89%), Postives = 100/198 (50.51%), Query Frame = 0
Query:  216 RTVNLLKESVYLTDMDLTRYLPECANNLTREFMMD-ILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQCLVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAXXXXXXXXVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPGRKPPWPSEAAIDLLREASCF 412
            RT +  ++ +YL DMDL R LPE  N+  + F +   LPGG  C M  +    RPF+GPNLY+TPPGS+THFHQDG+GTVDSGH C+ G N VIMLRR+ ED+KR+AL +L                                            ++ +  D       LY LPH  G+KP WP   AI    E + +
Sbjct:  490 RTFDPRRDYLYLLDMDLKRTLPESHNDFLKNFRLPKCLPGGDFCMMNSVNDLGRPFMGPNLYVTPPGSFTHFHQDGHGTVDSGHMCIDGYNEVIMLRRMSEDHKRQALHLLH--------------------------------------YNDRRQKNIHYD------ALYGLPHHDGKKPLWPDHEAIKNCDELNYY 643          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20216.5722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LCL4_ECTSI7.260e-8846.44ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2SQY1_9STRA6.230e-5533.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DKI0_9STRA1.380e-4339.90Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S3ZG35_9EUKA4.050e-3932.56Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A448ZRZ6_9STRA7.910e-3537.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EEL1_9STRA2.990e-3337.21Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FK00_9STRA1.390e-3137.04Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1CQ01_9STRA2.590e-3144.70Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
K0SGJ8_THAOC4.070e-3153.66C2H2-type domain-containing protein n=1 Tax=Thalas... [more]
A0A7S3Q867_9STRA1.180e-3038.89Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 24..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20216contigH-elongata_contig20216:983..6501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20216.5722.1mRNA_H-elongata_contig20216.5722.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20216 983..6501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20216.5722.1 ID=prot_H-elongata_contig20216.5722.1|Name=mRNA_H-elongata_contig20216.5722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=418bp
MDVCQRSRLDPLDEAYVLDLFECPDVTVIIKGLAKRLDPNLWNTRYLAER
CGTVMYHNFRRFCLAEKDPGGAFVAIPEVEKAWSSMRLCDYVRYLDKRAE
ARRTLAIAAATTAAASPSPTSPTMASSSTSSSSAVASSTKRRSSSSKTPC
VEDGGSKDNVGGDGGDPVGGISEGNGDVGGINAGMTRREEGGEGGGGGGV
EQDPCMEFTSFDGKPRTVNLLKESVYLTDMDLTRYLPECANNLTREFMMD
ILPGGSTCAMQYMPRESRPFLGPNLYITPPGSWTHFHQDGNGTVDSGHQC
LVGRNRVIMLRRLDEDNKRRALKILSGDLTTSDGSGVDGGGEGSRPAAAA
AAAAGVRGEGEGGAVKGAVRRGVVLDGGSGEDMLYRLPHGPGRKPPWPSE
AAIDLLREASCFGSLCL*
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