prot_H-elongata_contig20214.5721.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20214.5721.1
Unique Nameprot_H-elongata_contig20214.5721.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length953
Homology
BLAST of mRNA_H-elongata_contig20214.5721.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 8.270e-186
Identity = 449/989 (45.40%), Postives = 577/989 (58.34%), Query Frame = 0
Query:    3 KIITTQAGERRQSLFQEQHVP-QRERHLCPLAITDRRQEQVEKITEDTREIVSSSEALAGLLRDEMEGRGGELSERRRAAEDGLTSWEQAAEADPALRARRRVYDCEILVLSHRMAGGSA---SLATAFYRLREQTGRQRRARAWFSEARGRRDARLVCAAFDALARGGRSKAAEAVVAVARCRAGLATWRRTTALARRVKTFRWARDRALAGAGFRRWRQR-------AGGINYGDE--WAMEVVEEETLLARSLGLFRERRAKRIVLRAWHGAVQTAAVVEIMKETGARHSTGRSGRARRQSSGFGRQ---SGVISGRDELSPGGACGARLRNAEAIARRRRFETEGRFALRWWWQQSRSSALGKTAGQRRSIRQWRRWAENARSARRASTKARERYIVTLGRRVITAWSVTMATRARRRAGAAAFFASLSSVIRRKACRRWASHAALTAVEAEQTMAALEHCYNGCLRSHLRAWSALAKKRRLLCHCLELLGRGHRVVKIGTAFRAWRRGTAHVRDIVXXXXXIKASERQRGAWSAAATRRRSLAALSLSFHVWSRLCRRAAVIHSLTIRAADRKRRLALARGFRAFCLSRRWGIIAIDRRRTVPGRSGCGAGGSGDNDEIHYQSEGD------EAAQAVETVVQARAALEGRVDHLRARLAEERALALERRAEADGEGLLVAPSLGARFGDLTKRQSEAFEKLQAETLEMRQRATLAEGAAQEARAETTRKAVAARAAIEETLAEGRKLKQELEQRKALRARVDLEAARAASQATALSDRFAGAEQELGFETTRNADIRCAKDKENSRLRAAATVGERRLVAAESALRRKDKEIEYLRSRAARQGFNNGG----------GKSAEA--LQFRIFAVEANARCAMERCSEAAVEKRAAAGSAMAEAFRAAGSETAV----EADRRAIRFERKMAEAGRLVSESAANERREVAGLALRRAEAKLRRTADLSLRASLNHTPLREHPRS 953
            + +  +AG   Q L + + V  + ER+   LA   R QEQVE  T +TR+IVS+SEA+A  LR EMEGRGGELS R+R AE+GL  WE+AA+ DP LRARRR YDCE+L L HRM  G A   SLA+AF+ LR +T +QRRAR WF+ +  RR+A LV +AF ALARG R +AA A VA ARCR GLA W+R   LAR+++T  W R+RA A    + WRQR       AGG   G++  WA    E E L  R L LFRERRAKR+VL+AW  A QT+AVV +M+           G A+    G+GR+    G  + +DE++     GARLR AEA+ RR RFET+   A RWW +  +   L +TAGQRR+IR+WR    + RS+  A+ +AR  Y+++LGRRV+ AWS   ATR RRR GAA+  ++L+   +R++ R+WA  AA  A EA+ T+ AL H  + CLR HLRAWSA A++R  L  C+ LL RG RV       R WRR TA  RD       I        AW+AAA RRR  AALS+ F  W+   RR A IHSLT                            A         RS    G         Y+  GD      EA   V+T + A+ ALEG+ +       E  A  +E    + G G +    L       T+++S    KLQAET E+RQR  +A    +  R E  RKA A   ++E  LAE  +LK + EQ + L A++D EA +AA+QA ALSDR AGAEQ+LGFE TRN      +++ N+RLRAAAT  E R+  AES LRRK  EIE LRS+ A+ G + GG          G++++   L+FRIFA  A+AR A+ERC+ AA E+R AAGS +AEA R AGSE       EA+      E  +A A R+ +ES A+ERREVA LALR AEAKLR +ADLSLRASL+H PL  +PRS
Sbjct:  906 RTLIAKAGGEVQVLHESRRVAHEAERYHATLA---RIQEQVEATTGETRKIVSTSEAIAWELRAEMEGRGGELSCRKRDAEEGLADWERAAQNDPDLRARRRAYDCEVLALRHRMGCGGANNISLASAFHLLRARTAQQRRAREWFARSTARRNALLVRSAFTALARGSRCRAATAAVAAARCRRGLAAWKRAATLARKIRTLCWLRERAAAVKALQGWRQRCVKAVYLAGGSAGGEDGRWAAGREEREDLEWR-LELFRERRAKRVVLQAWRAAAQTSAVVTVMQ-----------GEAK---CGWGREVGRRGCAAIQDEVAACSGWGARLRTAEALGRRHRFETQIGSAFRWWRRHRQCKVLARTAGQRRAIRRWRHRVNDIRSSHEATAEARGSYVLSLGRRVLAAWSSAAATRVRRRTGAASLASALAFSTKRRSFRQWAFQAAAAAREADNTVVALGHYGDRCLRDHLRAWSAFARERCALRRCVGLLLRGRRVCLTAAGLRLWRRQTAKARDANLRECRIM-------AWTAAAARRRRFAALSVCFSAWTSTRRRVAAIHSLT--RXXXXXXXXXXXXXXXXXXXXXXXXAATATAAATAERSHISRGEDTTRYNNGYRPRGDMGVVVEEATAPVQTAIAAKVALEGKREGEEGGDGEVAAAVVEEPFRSRGRGKMGPTKL-------TEKESLLIIKLQAETRELRQREAVAAKQEERLRLEAARKAAATAESLESALAERNRLKAQAEQHEVLFAQLDSEAQQAAAQAAALSDRLAGAEQDLGFEATRNTQELRERNEGNARLRAAATAAEERIAIAESTLRRKGLEIEELRSKCAKAGLDIGGRGKGGRQGRGGRASDTAGLEFRIFAASADARSALERCTVAADERRTAAGSVLAEALRVAGSEADTIKSNEAEFDCTSHEGGVAAARRIAAESVADERREVADLALREAEAKLRNSADLSLRASLDHRPL-ANPRS 1859          
BLAST of mRNA_H-elongata_contig20214.5721.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 7.960e-126
Identity = 391/986 (39.66%), Postives = 519/986 (52.64%), Query Frame = 0
Query:    3 KIITTQAGERRQSLFQEQHVP-QRERHLCPLAITDRRQEQVEKITEDTREIVSSSEALAGLLRDEMEGRGGELSERRRAAEDGLTSWEQAAEADPALRARRRVYDCEILVLSHRMAGGSA---SLATAFYRLREQTGRQRRARAWFSEARGRRDARLVCAAFDALARGGRSKAAEAVVAVARCRAGLATWRRTTALARRVKTFRWARDRALAGAGFRRWRQRA--------GGINYGD-EWAMEVVEEETLLARSLGLFRERRAKRIVLRAWHGAVQTAAVVEIMK-ETGARHSTGRSGRARRQSSGFGRQSGVISGRDELSPGGACGARLRNAEAIARRRRFETEGRFALRWWWQQSRSSALGKTAGQRRSIRQWRRWAENARSARRASTKARERYIVTLGRRVITAWSVTMATRARRRAGAAAFFASLSSVIRRKACRRWASHAALTAVEAEQTMAALEHCYNGCLRSHLRAWSALAKKRRLLCHCLELLGRGHRVVKIGTAFRAWRRGTAHVRDIVXXXXXIKASERQRGAWSAAATRRRSLAALSLSFHVWSRLCRRAAVIHSLTIRAADRKRRLALARGFRAFCLSRRWGIIAIDRRRTVPGRSGCGAGGSGDNDEIHYQSEGDEAAQAVETVVQARAALEGRVDHLRARLAEERALALERRAEADGEGLLVAPSLGARFGD----------LTKRQSEAFEKLQAETLEMRQRATLAEGAAQEARAETTRKAVAARAAIEETLAEGRKLKQELEQRKALRARVDLEAARAASQATALSDRFAGAEQELGFETTRNADIRCAKDKENSRLRAAATVGERRLVAAESALRRKDKEIEYLRSRAARQGFNNGG----------GKSAEA--LQFRIFAVEANARCAMERCSEAAVEKRAAAGSAMAEAFRAAGSET-AVEADRRAI----RFERKMAEAGRLVSESAANERREVAGLALRRAEAKLRRTADLSLRASLNHTPL 947
            + +  +AG   Q L + + V  + ER+   LA   R QEQVE  T +TR+IVS+SEA+A  LR EMEGRGGELS R+R AE+GL  WE+AA+ DP LRARRR YDCE+LVL HRM  G A   SLA+AF+ LR +T +QRRAR WF  +  R +A LV +AF ALARG RS+AA A VA ARCR GLA W+R   LAR+++T  W R+RA A    R WRQR         GG+   D  WA    E E    R L LFRERRAKRIVL+AW  A QT+AV+ +M  ET       R G       G GR+ G    +DE++     GARLR AEA+ RR RFET+   A RWW +  + + L +TAGQRR+IR+WR    + RS+  A+ +AR       GR    AW+   A R R        FA+LS          W S     A     T  A               +S L+ +R           R H   + G     +  G    RD+           +   A   A     SL    L+    +R+  R AV+  +    A  +R  A            R+  +    R+ V                +   +EG++ A    ++                    +  + ++R  E  G+G + A  +G  +            LT+++S    KLQAET EMR+R  +A    +  + E  RKA A  A++E  LAE  +LK + EQR+ L A++D EA +AA+QA ALSDR AGAEQ+LGFE TRN      +++ N+RLRAAAT  E R+  AES LR+K  EIE LRS+ A+ G   GG          G++++   L+FRIFA  A+AR A++RC+ AA E+R AAGS +AEA R AGSE   ++++        R E  +A A R+ +ES A+ERREVA LALR AEAKLR +ADLSLRASL+H PL
Sbjct:  992 RTLIAKAGGEVQVLHESRRVAHEAERYHATLA---RIQEQVEATTGETRKIVSTSEAIAWELRAEMEGRGGELSCRKRDAEEGLADWERAAQNDPHLRARRRAYDCELLVLRHRMGCGGANNISLASAFHHLRTRTAQQRRAREWFERSTARCNALLVRSAFSALARGSRSRAATAAVAAARCRRGLAAWKRAATLARKIQTLCWMRERAAAVKTLRGWRQRCVKAVYLEGGGVGGDDGRWATGREEREDSEWR-LELFRERRAKRIVLQAWRAAAQTSAVIAVMLGET-------RCG----WGPGVGRR-GCAPIQDEVAAYSGWGARLRTAEALGRRHRFETQIGSAFRWWRRHRQCNVLARTAGQRRAIRRWRHRVNDIRSSHEATAEAR-------GRSPRLAWTAAFARRRR--------FAALSVCF-----SAWTSTPRRVAAIHSLTRRAAAXXXXXXXXXXXXXFS-LSGRRAATAALAATAERSHN--RRGEDMTRYNNGHGPRRDMGFVVEEATDPIQTAIAAKVALEGEVSLLRAGLAQEK-ARVLERHAVVCEMAKEVARSERERA------------RYAKVL---RQQVKEXXXXXXXXXXXXPNMTTGAEGEDRALGKPSLPW-----------------HDGFMTVQREGEESGDGEVAAAVVGEPYRSRGSGKMGSMKLTEKESLLIMKLQAETREMRRREAVAAKQEERLKLEAARKAAATAASLESALAEQNRLKAQAEQREVLIAQLDSEAQQAAAQAAALSDRLAGAEQDLGFEATRNTQELRERNEGNARLRAAATAAEERIAIAESTLRQKRLEIEELRSKCAKAGLGIGGRGKGGRQSRGGRASDTAGLEFRIFAASADARSALDRCTVAADERRTAAGSVLAEALRVAGSEADTIKSNEEDFDCTSRDEGGVAAARRIAAESVADERREVADLALREAEAKLRHSADLSLRASLDHRPL 1905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20214.5721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLH8_ECTSI8.270e-18645.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU58_9PHAE7.960e-12639.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 720..740
NoneNo IPR availableCOILSCoilCoilcoord: 630..650

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20214contigH-elongata_contig20214:1978..6865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20214.5721.1mRNA_H-elongata_contig20214.5721.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20214 1978..6865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20214.5721.1 ID=prot_H-elongata_contig20214.5721.1|Name=mRNA_H-elongata_contig20214.5721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=953bp
MGKIITTQAGERRQSLFQEQHVPQRERHLCPLAITDRRQEQVEKITEDTR
EIVSSSEALAGLLRDEMEGRGGELSERRRAAEDGLTSWEQAAEADPALRA
RRRVYDCEILVLSHRMAGGSASLATAFYRLREQTGRQRRARAWFSEARGR
RDARLVCAAFDALARGGRSKAAEAVVAVARCRAGLATWRRTTALARRVKT
FRWARDRALAGAGFRRWRQRAGGINYGDEWAMEVVEEETLLARSLGLFRE
RRAKRIVLRAWHGAVQTAAVVEIMKETGARHSTGRSGRARRQSSGFGRQS
GVISGRDELSPGGACGARLRNAEAIARRRRFETEGRFALRWWWQQSRSSA
LGKTAGQRRSIRQWRRWAENARSARRASTKARERYIVTLGRRVITAWSVT
MATRARRRAGAAAFFASLSSVIRRKACRRWASHAALTAVEAEQTMAALEH
CYNGCLRSHLRAWSALAKKRRLLCHCLELLGRGHRVVKIGTAFRAWRRGT
AHVRDIVLRGHRIKASERQRGAWSAAATRRRSLAALSLSFHVWSRLCRRA
AVIHSLTIRAADRKRRLALARGFRAFCLSRRWGIIAIDRRRTVPGRSGCG
AGGSGDNDEIHYQSEGDEAAQAVETVVQARAALEGRVDHLRARLAEERAL
ALERRAEADGEGLLVAPSLGARFGDLTKRQSEAFEKLQAETLEMRQRATL
AEGAAQEARAETTRKAVAARAAIEETLAEGRKLKQELEQRKALRARVDLE
AARAASQATALSDRFAGAEQELGFETTRNADIRCAKDKENSRLRAAATVG
ERRLVAAESALRRKDKEIEYLRSRAARQGFNNGGGKSAEALQFRIFAVEA
NARCAMERCSEAAVEKRAAAGSAMAEAFRAAGSETAVEADRRAIRFERKM
AEAGRLVSESAANERREVAGLALRRAEAKLRRTADLSLRASLNHTPLREH
PRS
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