prot_H-elongata_contig202087.5718.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig202087.5718.1
Unique Nameprot_H-elongata_contig202087.5718.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Match: D7FKD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD4_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.790e-15
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MQTLLSSRLMPVREHLLQLRRRYHIRADEVKAAKAAIERETMADDGAILERLRSAESLKQV 61
            +Q+L SSRLMPVRE LLQLRRR H R +E+ AA+AAIERET+AD  AI+ERLRSAE+LKQ 
Sbjct:  125 LQSLASSRLMPVRERLLQLRRRLHGRGEELTAARAAIERETLADAEAIVERLRSAETLKQA 185          
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Match: A0A835Z0R6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.130e-13
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    1 MQTLLSSRLMPVREHLLQLRRRYHIRADEVKAAKAAIERETMADDGAILERLRSAESLKQV 61
            +Q L++S+L+P RE LLQLRRR   R +EV++AKAAIERETMAD   ILERLRSAE+LK  
Sbjct:  192 LQALVTSKLLPAREQLLQLRRRLLARGEEVQSAKAAIERETMADAHTILERLRSAEALKMA 252          
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Match: A0A6H5JBH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH8_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.000e-8
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    2 QTLLSSRLMPVREHL------LQLRRRYHIRADEVKAAKAAIERETMADDGAILERLRSAESLKQV 61
            Q  L   ++P+RE        LQLRRR H R +E++AA+AAIERET+AD  AI+ERLRSAE+LKQ 
Sbjct:  170 QQALGHTVVPLREAYSRRLSRLQLRRRLHGRGEELRAARAAIERETLADAEAIVERLRSAETLKQA 235          
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Match: A0A7S3MHC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.370e-7
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 MQTLLSSRLMPVREHLLQLRRRYHIRADEVKAAKAAIERETMADDGAILERLRSAESLKQV 61
            ++ +L+ RL+P REHLLQLRR+    ++EV A K  IE+ET  D   IL RL SAES +Q 
Sbjct:  112 LRAILTGRLLPKREHLLQLRRKLQKASEEVHAKKENIEKETRTDTDQILRRLDSAESFRQA 172          
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Match: A0A7S1C795_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C795_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.490e-6
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    6 SSRLMPVREHLLQLRRRYHIRADEVKAAKAAIERETMADDGAILERLRSAESLK 59
            S+ LM  RE ++Q       RA+EVKAA+ AIERET AD  AIL RLRSAE+ K
Sbjct:   24 SATLMAKRERIVQQALSVQARAEEVKAARRAIERETTADTEAILHRLRSAEAFK 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202087.5718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKD4_ECTSI1.790e-1572.13EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z0R6_9STRA6.130e-1365.57EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JBH8_9PHAE1.000e-856.06EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3MHC0_9STRA2.370e-750.82Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1C795_9STRA4.490e-657.41Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig202087contigH-elongata_contig202087:893..1084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig202087.5718.1mRNA_H-elongata_contig202087.5718.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig202087 893..1084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig202087.5718.1 ID=prot_H-elongata_contig202087.5718.1|Name=mRNA_H-elongata_contig202087.5718.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MQTLLSSRLMPVREHLLQLRRRYHIRADEVKAAKAAIERETMADDGAILE
RLRSAESLKQVRR*
back to top