prot_H-elongata_contig201986.5714.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3GCN4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GCN4_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.860e-25 Identity = 71/166 (42.77%), Postives = 99/166 (59.64%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
MG R+ +G + + R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K++ YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 75 MGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPYLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVHYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 238
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3V7V5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V7V5_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.490e-25 Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEEQMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
+G R+ +G + + R + I Q Y ESI++K + K P GV L+KADEP+ +E +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+++D+ D RRSVSG +LML
Sbjct: 138 LGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGRENAKPCLTPLEPGV-NLTKADEPQT-EEAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSNADWAGNRDDRRSVSGMLLML 299
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA) HSP 1 Score: 110 bits (274), Expect = 5.500e-25 Identity = 71/166 (42.77%), Postives = 101/166 (60.84%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
MG R+ +G N + R + I Q Y ESI++K+ + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ + TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 608 MGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 771
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.240e-25 Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
MG R+ +G + + R + I Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 27 MGRARFILGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 190
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3PU23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PU23_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.090e-24 Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 0
Query: 15 REVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D R SVSG +LML
Sbjct: 4 RTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRHSVSGTLLML 149
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3SPB0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SPB0_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.630e-24 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 0
Query: 15 REVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 4 RTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-RLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 149
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3J149_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3J149_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.630e-24 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 0
Query: 15 REVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 4 RTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-RLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 149
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.860e-24 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
MG R+ +G + + R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LM+
Sbjct: 107 MGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMM 270
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3HKQ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HKQ8_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.970e-24 Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPK-EEQMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
+G R+ +G + + R + I Q Y ESI++K + K P GV L+KADEP+ + + +M+ PYR VG+LM+ A TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 138 LGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLML 301
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.280e-24 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 1 MGDTRYYMGC----NRKAREVKIGQHLYVESIVEKL--DIKKESKIPATSGVPTLSKADEPRNPKEE-QMRKFPYREAVGALMWTATMTRSDIASAVRVVARFCENPGPARKKAVMKIMQYLLHTKDWGITYGGQDCGLCMEAYTDSDFGACLDTRRSVSGAVLML 159
MG R+ +G + + R + I Q Y ESI++K + K P GV L+KADEP+ +++ +M+ PYR VG+LM+ + TR DI+ AV ++RF ENPG A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML
Sbjct: 364 MGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLML 527 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201986.5714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig201986.5714.1 ID=prot_H-elongata_contig201986.5714.1|Name=mRNA_H-elongata_contig201986.5714.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bpback to top |