prot_H-elongata_contig2018.5702.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig2018.5702.1
Unique Nameprot_H-elongata_contig2018.5702.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
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BLAST of mRNA_H-elongata_contig2018.5702.1 vs. uniprot
Match: UPI001E1E0CD9 (uncharacterized protein LOC123530587 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0CD9)

HSP 1 Score: 53.1 bits (126), Expect = 2.830e-5
Identity = 40/136 (29.41%), Postives = 62/136 (45.59%), Query Frame = 0 
Query:   12 EEMGLIQRSLEDHYMNVKLSRRVYMAAKERATLNPDDLLCIAIDGSDQSSYGAPYFRQESKESCKGWKM-RLKLIGALVSGRMCMFYTLGYN-WESGSNLTVQVLHSTLMRPSAVLPPGKKLPRSLHLQMDNCSRD 145
            E+  +I R    H       R+ Y A ++ +  +P   L + IDG DQS    P+    + +     ++ +  L G L  G       +  N +    NLT+ VL   L++ +     GKKLPR L+LQ DNC R+
Sbjct:  316 EKKEIILREKSLHNDRQMFERKYYYAKRDASRKHPQQFLSLIIDGMDQSKTNLPHIVGRTPKIINPAELLKTHLTGVLDHGHQKFTIYVDVNQYPHDPNLTMNVLLKKLIQLAK--ENGKKLPRVLYLQADNCWRE 449
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2018.5702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E1E0CD92.830e-529.41uncharacterized protein LOC123530587 n=1 Tax=Merce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33153:SF3coord: 17..145
NoneNo IPR availablePANTHERPTHR33153FAMILY NOT NAMEDcoord: 17..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig2018contigH-elongata_contig2018:13178..14628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig2018.5702.1mRNA_H-elongata_contig2018.5702.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig2018 13177..14628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig2018.5702.1 ID=prot_H-elongata_contig2018.5702.1|Name=mRNA_H-elongata_contig2018.5702.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
QRRNGGPGWKTEEMGLIQRSLEDHYMNVKLSRRVYMAAKERATLNPDDLL
CIAIDGSDQSSYGAPYFRQESKESCKGWKMRLKLIGALVSGRMCMFYTLG
YNWESGSNLTVQVLHSTLMRPSAVLPPGKKLPRSLHLQMDNCSRDRPGIL
Q
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