prot_H-elongata_contig20179.5700.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig20179.5700.1
Unique Name	prot_H-elongata_contig20179.5700.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	410

Homology

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BLAST of mRNA_H-elongata_contig20179.5700.1 vs. uniprot
Match: D8LR99_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR99_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 3.710e-43
Identity = 126/270 (46.67%), Postives = 149/270 (55.19%), Query Frame = 0

Query:  156 QPPRRGDGRSRQSTALSTVAYFARALACLPPASED----GQDGLQRRARLSLLMGARMFTEACRLLRARAW------------EGPGGRWRDDPGAADAWSAAMRLLDALQRA-----TEDEQEQAEEGAVGADAPRTGVEGAPLGAAVVPSATFHGGVSLQFRLAFEDSLAETVLADSADRMEMVMTCRPSNLAPIYVVRMVRRAVAAAAASPPESEWPAANTYDCGKGQVGIVTRQAGKVCQRAVRSASAQTLKKCLRLLFEDNANEA 404
            QPP  G+ RS  +  ++T AYF+RALACLPPA ED    G    +RRARLSLL+GAR FTEACRLLR RAW             G  G WR D GAA+AW A MRLL+ L RA     T D+ +        A     G     +  A       +G V+LQFRLAFED+LAET+L DS +RM+ VM CRPS L P+ VVRMVRRA  A  AS      P A   D G G  G  +        ++ R  S QTLK CL LL ED+   A
Sbjct: 1157 QPP--GEERSYGAPPVAT-AYFSRALACLPPAVEDDRGDGAGSQRRRARLSLLLGARKFTEACRLLRHRAWGCFGGAGAGAGSSGKRGSWRGDRGAAEAWGANMRLLNELNRAAAAAATIDKADDXXXXXXXAAGESVGDMTVSVSRAAAAETAGNGSVALQFRLAFEDTLAETILEDSPERMKEVMLCRPSGLTPVRVVRMVRRAAEAWVAS------PTAVVADGGVGGGGDDSE-----ANQSPRCGSTQTLKMCLLLLLEDDTRLA 1412

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig20179.5700.1 vs. uniprot

BLAST of mRNA_H-elongata_contig20179.5700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LR99_ECTSI	3.710e-43	46.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..262

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig20179	contig	H-elongata_contig20179:2513..3742 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig20179.5700.1	mRNA_H-elongata_contig20179.5700.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig20179 1529..6884 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig20179.5700.1 ID=prot_H-elongata_contig20179.5700.1|Name=mRNA_H-elongata_contig20179.5700.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp
MGVTDEGIQAGDLHGPSEPESDFKATEACGDGDTSSVRVKALDSSSGGRA
SSRERARPQSGRRDDSPSSVDENRPESSAAPHSHTPPLPRSFRSSEDITN
DKPPNASEAHNSSLATRTSSAASGEHSPVPASGPTVPSTPTQVMNEGDAP
PPSPSQPPRRGDGRSRQSTALSTVAYFARALACLPPASEDGQDGLQRRAR
LSLLMGARMFTEACRLLRARAWEGPGGRWRDDPGAADAWSAAMRLLDALQ
RATEDEQEQAEEGAVGADAPRTGVEGAPLGAAVVPSATFHGGVSLQFRLA
FEDSLAETVLADSADRMEMVMTCRPSNLAPIYVVRMVRRAVAAAAASPPE
SEWPAANTYDCGKGQVGIVTRQAGKVCQRAVRSASAQTLKKCLRLLFEDN
ANEAPANTA*