prot_H-elongata_contig20175.5697.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20175.5697.1
Unique Nameprot_H-elongata_contig20175.5697.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: M2WVW0_GALSU (60S ribosomal protein L14e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVW0_GALSU)

HSP 1 Score: 63.9 bits (154), Expect = 4.910e-11
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    2 VFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNKVRLVVVPFLSRSIFCLPRETRNIPTLFLIRSLVRYKLADSSGVEKNSSQESK 87
            VFKRFVE+GRV LV+YG H GKL VI+DVVD N+V LV  P        LPR T N  +L L    V+ +    +GV + + +E K
Sbjct:    2 VFKRFVEVGRVVLVTYGEHRGKLGVIVDVVDQNRV-LVDGPQTG-----LPRHTINFKSLALTPFQVKIQHGSRTGVVRKALEEKK 81          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A8C0GLS4_CHEAB (Uncharacterized protein n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0GLS4_CHEAB)

HSP 1 Score: 59.3 bits (142), Expect = 1.040e-9
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNKVR-----LVVVPFLSRSI 48
            QVFKR+VEIGRVA +S+GPH GKL  I+DV+D N+V      L + P LS SI
Sbjct:    9 QVFKRYVEIGRVAYISFGPHAGKLVAIVDVIDQNRVSSETCSLFLSPVLSSSI 61          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A8J4UBA5_CLAMG (60S ribosomal protein L14 (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A8J4UBA5_CLAMG)

HSP 1 Score: 58.9 bits (141), Expect = 3.080e-9
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 VFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            VFKRFVEIGRVA V++GPHEGKL VI+DV+D N+
Sbjct:    2 VFKRFVEIGRVAYVAFGPHEGKLVVIVDVIDQNR 35          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A498N3B3_LABRO (60S ribosomal protein L14 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498N3B3_LABRO)

HSP 1 Score: 59.7 bits (143), Expect = 4.040e-9
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 VFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            VFKRFVEIGRVA V++GPHEGKL VIIDV+D N+
Sbjct:   28 VFKRFVEIGRVAFVAFGPHEGKLVVIIDVIDQNR 61          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A9U2F2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U2F2_PHYPA)

HSP 1 Score: 58.5 bits (140), Expect = 6.100e-9
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    2 VFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNKVRLVVVPFLSRS 47
            VF+RFVEIGRVAL++YGPH GKL VI+DV+D N+  LV  P + R+
Sbjct:    2 VFRRFVEIGRVALINYGPHYGKLVVIVDVIDQNRA-LVDAPDMVRT 46          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A3Q0QXM3_AMPCI (60S ribosomal protein L14 n=2 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0QXM3_AMPCI)

HSP 1 Score: 58.2 bits (139), Expect = 9.880e-9
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            QVFKRFVEIGRVA VS+GPH GKL  I+DV+D N+
Sbjct:    2 QVFKRFVEIGRVAYVSFGPHAGKLVAIVDVIDQNR 36          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: UPI001E3D70B5 (hypothetical protein n=1 Tax=Exiguobacterium aurantiacum TaxID=33987 RepID=UPI001E3D70B5)

HSP 1 Score: 57.4 bits (137), Expect = 1.050e-8
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    2 VFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            VFKRFVEIGRVA +++GPHEGKL  I+DV+D N+
Sbjct:    1 VFKRFVEIGRVAFIAFGPHEGKLVAIVDVIDQNR 34          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A3Q2XC30_HAPBU (60S ribosomal protein L14 n=3 Tax=Haplochromini TaxID=319058 RepID=A0A3Q2XC30_HAPBU)

HSP 1 Score: 58.2 bits (139), Expect = 1.090e-8
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            QVFKRFVEIGRVA VS+GPH GKL  I+DV+D N+
Sbjct:   11 QVFKRFVEIGRVAYVSFGPHAGKLVAIVDVIDQNR 45          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A3Q4IA28_NEOBR (60S ribosomal protein L14 n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4IA28_NEOBR)

HSP 1 Score: 58.2 bits (139), Expect = 1.090e-8
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            QVFKRFVEIGRVA VS+GPH GKL  I+DV+D N+
Sbjct:   12 QVFKRFVEIGRVAYVSFGPHAGKLVAIVDVIDQNR 46          
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Match: A0A3P9BXV6_9CICH (60S ribosomal protein L14 n=2 Tax=Maylandia zebra TaxID=106582 RepID=A0A3P9BXV6_9CICH)

HSP 1 Score: 58.2 bits (139), Expect = 1.110e-8
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNK 35
            QVFKRFVEIGRVA VS+GPH GKL  I+DV+D N+
Sbjct:   11 QVFKRFVEIGRVAYVSFGPHAGKLVAIVDVIDQNR 45          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20175.5697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2WVW0_GALSU4.910e-1147.6760S ribosomal protein L14e n=1 Tax=Galdieria sulph... [more]
A0A8C0GLS4_CHEAB1.040e-958.49Uncharacterized protein n=1 Tax=Chelonoidis abingd... [more]
A0A8J4UBA5_CLAMG3.080e-976.4760S ribosomal protein L14 (Fragment) n=2 Tax=cellu... [more]
A0A498N3B3_LABRO4.040e-979.4160S ribosomal protein L14 n=1 Tax=Labeo rohita Tax... [more]
A9U2F2_PHYPA6.100e-963.04Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A3Q0QXM3_AMPCI9.880e-974.2960S ribosomal protein L14 n=2 Tax=Cichlidae TaxID=... [more]
UPI001E3D70B51.050e-870.59hypothetical protein n=1 Tax=Exiguobacterium auran... [more]
A0A3Q2XC30_HAPBU1.090e-874.2960S ribosomal protein L14 n=3 Tax=Haplochromini Ta... [more]
A0A3Q4IA28_NEOBR1.090e-874.2960S ribosomal protein L14 n=1 Tax=Neolamprologus b... [more]
A0A3P9BXV6_9CICH1.110e-874.2960S ribosomal protein L14 n=2 Tax=Maylandia zebra ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..87
e-value: 1.0E-15
score: 59.7
NoneNo IPR availablePANTHERPTHR11127:SF260S RIBOSOMAL PROTEIN L14coord: 2..39
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 2..39
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 5..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20175contigH-elongata_contig20175:4118..4378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20175.5697.1mRNA_H-elongata_contig20175.5697.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20175 4118..4378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20175.5697.1 ID=prot_H-elongata_contig20175.5697.1|Name=mRNA_H-elongata_contig20175.5697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
QVFKRFVEIGRVALVSYGPHEGKLAVIIDVVDSNKVRLVVVPFLSRSIFC
LPRETRNIPTLFLIRSLVRYKLADSSGVEKNSSQESK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR039660Ribosomal_protein_L14
IPR008991Translation_prot_SH3-like_sf