prot_H-elongata_contig201679.5692.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig201679.5692.1
Unique Nameprot_H-elongata_contig201679.5692.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Match: A0A6H5KTE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE4_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.480e-57
Identity = 98/185 (52.97%), Postives = 115/185 (62.16%), Query Frame = 0
Query:   11 MAGLPFTTSSYGDAGAWCSITAKDLKSLEWGTFWRFAIIYVPLWTCVAVNAYMYFRVHRAVRGHEAAMAAYAEPEEGDEDEEMGEDSAVTGGESAVVADSGR-----------------------RVGSRGVELSTSTPIIARLQLYPLALVVCWSWATANRVKEAIYPDSDAIFWLYILQYTFQ 172
            MA LP TT +YGDAGAWCSIT+KDLKSLEWGTFWRF++IYVPLW CV VN YM  +VHRA+RG EAAM AY EP  G E +  G                                         R G  G E STS PII RL+LYP+ LV+CWSWAT NR++EAI P +++ FWL+ILQY+FQ
Sbjct:    1 MACLPITTDNYGDAGAWCSITSKDLKSLEWGTFWRFSVIYVPLWVCVGVNGYMCIKVHRAMRGFEAAMVAYVEP--GHEMQAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTGPGGAETSTSIPIIERLRLYPIVLVICWSWATVNRIREAIEPYAESRFWLFILQYSFQ 183          
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Match: D8LGC7_ECTSI (Related to G-protein coupled receptors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC7_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.470e-50
Identity = 94/182 (51.65%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    1 MAYCWFVPLVMAGLPFTTSSYGDAGAWCSITAKDLKSLEWGTFWRFAIIYVPLWTCVAVNAYMYFRVHRAVRGHEAAMAAYAEPEEGDEDEE----------MGEDSAVTGGESAVVADSGRRVGSRGVELSTSTPIIARLQLYPLALVVCWSWATANRVKEAIYPDSDAIFWLYILQYTFQ 172
            MAYCW +PL MA LPFTT +YG+AGAWCSIT+KDLKSLEWGTFWRFA+IYVPL                     EAAM AY EP  G E +                               R G  GVE STS PII RL+LYP+ LVVCWSWAT NR +EAI P ++++FWL+ILQY+FQ
Sbjct:   70 MAYCWLIPLGMACLPFTTDNYGEAGAWCSITSKDLKSLEWGTFWRFAVIYVPL-------------------VFEAAMVAYVEP--GHETQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTGPGGVETSTSIPIIERLRLYPIVLVVCWSWATVNRTREAIEPYAESLFWLFILQYSFQ 230          
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Match: A0A7S2F7C4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7C4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.580e-19
Identity = 58/168 (34.52%), Postives = 78/168 (46.43%), Query Frame = 0
Query:    3 YCWFVPLVMAGLPFTTSSYGDAGAWCSITAKDLKSLEWGTFWRFAIIYVPLWTCVAVNAYMYFRVHRAVRGHEAAMAAYAEPEEGDEDEEMGEDSAVTGGESAVVADSGRRVGSRGVELSTSTPIIARLQLYPLALVVCWSWATANRVKEAIYPDSDAIFWLYILQYT 170
            + W +P + A LPFTT +YG+ GAWCSIT     S   G  W F  I+VP W  +  N  +Y  V+R VRG   + +            EM E S              RR   +  + +     + RLQLYPL LVV W+W T    +  + PD   IFWL  + Y+
Sbjct:  127 FSWGLPAIFAALPFTTGNYGNNGAWCSIT-PGTGSYWAGVMWIFVCIFVPCWLAIGYNVTVYLTVNRVVRGLHMSHSM----------SEMDEYS--------------RRTHLK--QRANQNQFVERLQLYPLVLVVSWTWVTIYCFQAMLEPDQH-IFWLAWIGYS 266          
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Match: D8LJZ4_ECTSI (G-protein coupled receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.680e-18
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0
Query:    5 WFVPLVMAGLPFTTSSYGDAGAWCSITAKDLKSLEWGTFWRFAIIYVPLWTCVAVNAYMYFRVHRAVRGHEAAMAAYAEPEEGDEDEEMGEDSAVTGGESAVVADSGRRVGSRGVELSTSTPIIARLQLYPLALVVCWSWATANRVKEAIYPDSDAIFWLYIL 167
            W   L+   LPFTT SYG  G+WC I       ++ GT WR+ ++Y PLW  +  N  +Y R+   VR     +A                     GG SAV        G    + +  T    RL  YP  L+  W++AT NR++ AI PD   +F L++L
Sbjct:  128 WGSALLSTLLPFTTDSYGSTGSWCWIETNPGSDVDVGTMWRYLVLYCPLWAAIVFNIKVYVRIFSVVRRFSTEIA---------------------GGASAV--------GPSAEQQTRMTKFSKRLVWYPAVLIASWTFATINRIQNAIDPDHP-VFGLFLL 260          
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Match: A0A7S1C6G2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6G2_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 9.530e-5
Identity = 21/41 (51.22%), Postives = 26/41 (63.41%), Query Frame = 0
Query:  131 LQLYPLALVVCWSWATANRVKEAIYPDSDAIFWLYILQYTF 171
            L LYPL L+VCW WAT NR++  + P+    FWLY L   F
Sbjct:   66 LLLYPLILLVCWFWATVNRLQNLVAPEEPQ-FWLYALGLAF 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201679.5692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KTE4_9PHAE2.480e-5752.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGC7_ECTSI1.470e-5051.65Related to G-protein coupled receptors n=1 Tax=Ect... [more]
A0A7S2F7C4_9STRA7.580e-1934.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LJZ4_ECTSI4.680e-1831.90G-protein coupled receptor n=1 Tax=Ectocarpus sili... [more]
A0A7S1C6G2_9STRA9.530e-551.22Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..100
e-value: 1.5E-5
score: 26.4
NoneNo IPR availablePANTHERPTHR23112G PROTEIN-COUPLED RECEPTOR 157-RELATEDcoord: 2..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..65
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.517
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig201679contigH-elongata_contig201679:496..1020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig201679.5692.1mRNA_H-elongata_contig201679.5692.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig201679 478..1020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig201679.5692.1 ID=prot_H-elongata_contig201679.5692.1|Name=mRNA_H-elongata_contig201679.5692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MAYCWFVPLVMAGLPFTTSSYGDAGAWCSITAKDLKSLEWGTFWRFAIIY
VPLWTCVAVNAYMYFRVHRAVRGHEAAMAAYAEPEEGDEDEEMGEDSAVT
GGESAVVADSGRRVGSRGVELSTSTPIIARLQLYPLALVVCWSWATANRV
KEAIYPDSDAIFWLYILQYTFQVN*
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