prot_H-elongata_contig20154.5686.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20154.5686.1
Unique Nameprot_H-elongata_contig20154.5686.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length589
Homology
BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: D7FVT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT4_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 2.200e-140
Identity = 319/667 (47.83%), Postives = 374/667 (56.07%), Query Frame = 0
Query:    3 PQARSSRPSSNQIGGDGLL-LQHQEQAAFDGWSAHVRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGRRKXXXXXXXXXX--------EVRQAP-ASVDAGPAPRAALQERGRAE-NV----PDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKGTGPQVAGDSG--GKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPETG-WARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRSGDA-----------------------SIRPPRIAVADPLSATAVTKFQPPLWQPTGG--GVVTGRSPARLPG--------RDGDEENVQEAFSRSA---VPFRPDST-WGS-AAASGVRTDDHGAVP------------ASRASRVWNKMQGESECWAGAGRSLTWAPDISVGAQLFDESGTKEVDVREVCGRGGDHDSGRR--------DSVAIANARKSAVRDTVARRRLESLD-----GAAGHGVADDVESGADRDGRMSSAPPLLSLASFNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW 588
            P+ R++  +   + G G   + H      DGWSAHVRYFLARYP ETR  VAQRLA+YGI  LL+SH QE+L+LD L +ATD+AD++V+S MREHARGR K                  + RQ P A+     AP   L+ER  A+ N+    P  AG  +  RKRH V  RPDVLTRYPFVDDLA  +GGGVGA + QATPTTP+Q+LAKREIRR      LAHE F ELKASALGIRLSDLP ALQ+LFF DSASLL +KG             +   RSAKDVHLVMALARE L PTLA AARDTSTLS+AST  G E G W RDGQNMF+SERRW+K+VAHV+RRLW++DG P    A                       S +P  +A     +A    +FQ P+W+P GG  G V                  R G+ ENV  A S         R D+T WG  +AAS +   D    P               A R W     E+E W GAGRS+  AP          E+G      R   G G  H S RR        D+  IA AR+SAVRDTVARRRL+ LD     G A  G   D  SG   DG        L+ A +++  RGHTPGEHALDIA AFLESSLMTRLAGGDW
Sbjct:    8 PKPRAASRNHGYLNGGGFDGIGHGR--GLDGWSAHVRYFLARYPPETRDLVAQRLASYGIRSLLSSHRQENLSLDALLAATDAADREVLSSMREHARGRHKQRGAAAPLCRSRTSSPQRQQRQHPRANGGNAAAPTEVLRERVLADKNIDAGPPGAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRR------LAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGXXXXXXXXXXXXARGAKRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGAEAGGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXXXAGPSRKPATVAAT---AAPFGMEFQQPVWKPVGGRRGSVAXXXXXXXXXXXXXXRFLRGGEAENVTSAESFLGGLEADSRSDTTGWGGFSAASRISASDGDGGPYPGEGXXXXXXXXXEALRAWE----EAEDWVGAGRSIARAPGEEQEEHARGEAGGLFAAPR---GLGAVHGSRRRRKQSGGAGDAGRIAGARRSAVRDTVARRRLDRLDRGSSLGDATQGFPADGRSGVSGDGDRDRGGSSLA-AEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDW 655          
BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: A0A6H5JP21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP21_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 6.360e-133
Identity = 309/688 (44.91%), Postives = 369/688 (53.63%), Query Frame = 0
Query:   31 DGWSAHVRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGRRKXXXXXXXXXXEV-----RQAPASVDAG---PAPRAALQERGRAE-----NVPDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKGTGPQVAGDSGGKPPA-RSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPETGWARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRS-------------------GDASIRPPRIAVADPLSATAV-TKFQPPLWQPTGGG--VVTGRSPARLPGRDGDEENVQE---AFSRSAVPFRPDSTWGSAAASGVRTDDHGAVPASRASRVWNKMQGESECWAGAGRSLTWAP-------------DISVGAQLFD-----------------------------------ESGTKEVDVREVC-----------GRGGDHDSGRRDSVA-----------------------IANARKSAVRDTVARRRLESLDGAAGHGVADDVESGADRDGRMSSAPPL--------LSLAS-FNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW 588
            DGWSAHVRYFLARYP ETR  VAQRLA+YGI  LL+SH QE+L+L+ L +ATD+AD++V+S MREHARGR+K           +     +Q   S D G    AP   L+ER  A+     + P  AG  +  RKRH V  RPDVLTRYPFVDDLA  +GGGVGA + QATPTTP+Q+LAKREIRR      LAHE F ELKASALGIRLSDLP ALQ+LFF DSASLL +KG G +          A RSAKDVHLVMALARE L PTLA AARDTSTLS+AST  G E GW RDGQNMF+SERRW+K+VAHV+RRLW++DG P                       A+  P R   A P +A     +FQ P+W+  GGG  +   R+ + + G + D  +       FS ++     D   G     GV  DD  A+      R W     E+E W GAGRS+  AP             D+   A+                                      + GT+   + EV            GRG      RR+S                         IA AR+SAVRDTVARRRL+ LD     G   DV  G   DGR   +            SLA+ +++  RGHTPGEHALDIA AFLESSLMTRLAGGDW
Sbjct:   45 DGWSAHVRYFLARYPPETRDVVAQRLASYGIRSLLSSHRQENLSLEALLAATDAADREVLSSMREHARGRQKQRGAAALSRSRMSSAQRQQRQHSRDNGGNGAAPTEVLRERVLADKNIDASPPAAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRR------LAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGGGSRXXXXXXXXXGANRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGSEAGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXAAAGPSRKPAAVPATAAPFGMEFQQPVWKRGGGGRYLRVTRADSFVGGLEEDSRSDTTRWGGFSETSRISASDGDGGPYPGEGVGGDDDEAL------RAWE----EAEDWVGAGRSIARAPGEEQEDYAQEEAGDLFAAARGLGAVHGSSRRRTQSAGAGGAGXXXXXXXXXXXSGADWKEGTRPAGMWEVSPPAHVVASSRTGRGRRGQGARRESGPAYLRGVQSRIRPQLDAHKDRLRKIAGARRSAVRDTVARRRLDRLDRGGNPG---DVTQGFPADGRSGVSGDRDKDRDRGGYSLATEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDW 713          
BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: A0A835Z222_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z222_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.030e-22
Identity = 103/328 (31.40%), Postives = 151/328 (46.04%), Query Frame = 0
Query:   37 VRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDL--TLDILASATDSADKDVMSIMREHA-RGRRKXXXXXXXXXXEVRQAPASVDAGPA-PRAALQERGRAENVPDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSD----LPTALQYLFFSDSASLLPTKGTGPQVAGDSGGKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPET---GWARDG--------------QNMFISERRWMKLVAHVVRRLWEIDG 339
            +R+ LA++P E +  + + LA +G+  LL +H  +DL      + +AT++A ++V +I+REH+ RG R             R+  ++    P  PR+ ++   R    PD              + RPDVL +YPFVD       G VG  L     TTP   LAKREIRR      LA   F E ++SA GIRL       PT +  LF +   +  P             G+    +   +HL++ALA+E+L  +L L  RDTS L   ST     T   G   D                +  + +  W +LVAHVVRRLW+++G
Sbjct:   12 LRHVLAKFPREQKTVIEECLAWHGLRVLLQAHRLDDLLGNASAVLAATEAARREVHAILREHSTRGPRPTARTKAATAVAKRRTRSASPTTPRLPRSPVKGTLRGSRQPD--------------IPRPDVLAKYPFVDGQ-----GNVGEILACPPRTTPFHRLAKREIRR------LAKAAFMEYRSSAHGIRLHAPPQIAPTGITPLFDARCRTSTPRLRDFKSALSALFGEATYSACGGMHLILALAQEALPHSLQLVLRDTSDLGDVSTAPSVATFGMGLTEDNIEVPGNTHPVKVPRNDAAVDQSEWTRLVAHVVRRLWQMEG 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVT4_ECTSI2.200e-14047.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP21_9PHAE6.360e-13344.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z222_9STRA2.030e-2231.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20154contigH-elongata_contig20154:1390..6812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20154.5686.1mRNA_H-elongata_contig20154.5686.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20154 1353..6812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20154.5686.1 ID=prot_H-elongata_contig20154.5686.1|Name=mRNA_H-elongata_contig20154.5686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=589bp
MWPQARSSRPSSNQIGGDGLLLQHQEQAAFDGWSAHVRYFLARYPFETRQ
FVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGR
RKKSSHAPPPPPEVRQAPASVDAGPAPRAALQERGRAENVPDRAGMPSYR
RKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKRE
IRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKG
TGPQVAGDSGGKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSAS
THEGPETGWARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRSGDASIRP
PRIAVADPLSATAVTKFQPPLWQPTGGGVVTGRSPARLPGRDGDEENVQE
AFSRSAVPFRPDSTWGSAAASGVRTDDHGAVPASRASRVWNKMQGESECW
AGAGRSLTWAPDISVGAQLFDESGTKEVDVREVCGRGGDHDSGRRDSVAI
ANARKSAVRDTVARRRLESLDGAAGHGVADDVESGADRDGRMSSAPPLLS
LASFNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW*
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