prot_H-elongata_contig20124.5671.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20124.5671.1
Unique Nameprot_H-elongata_contig20124.5671.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length601
Homology
[Close]
BLAST of mRNA_H-elongata_contig20124.5671.1 vs. uniprot
Match: D8LRY9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 6.680e-37
Identity = 124/356 (34.83%), Postives = 165/356 (46.35%), Query Frame = 0 
Query:  158 NTAVLYEVVAEEQLRAADEVAACIWLAGDMIRESLFAHVAEMWLTMKTEIP-----IIAATG------RSFSEEVAERLEETRLAVETELRVADEVLVARCEMDIVEPDWHGSSILRGDVLTRLEAFQNDNRRETL---ARNPRFSLTECRQDLLERLRGTREAVVAKINANHKAAATAAGGHGVYFSPAISDDEVSMGIDDVVYNVVQQLK-AIYIAAEEVRQPTGRVPTSDIRERLLERQRAADEAHLKGINHKPSESDSSAGDTSIGSSFVITRNERSSPARANSITKKKRRPGSGGRRCKNEDCSLHPHFGFNRPEYCSRHKLKGMFNVKGRRCINPECVRTPVYGKKGDPH 498
            N      V  EE+L+AAD+VA CIWLAGD +RE L A + ++W T++ E+        AA+G      +SF+E + ERL+ T  AVE EL+ A          +  +  W GS  LRGDVL+RLEA++ +N        + + RFS   C  D                    +A A A GG               +  +D   ++ Q L+ AI +    V+         +  +R      A                   A     G                    KK++R G+G RRCK+E C LHPHFG  RPEYCS+HKL GMFNVKGRRCI+PEC RTPVYG+ GDPH
Sbjct:  321 NXXXXXHVTEEERLQAADDVARCIWLAGDELREILLARLFDLWSTVEAEMVSYADGTAAASGGGGAPRKSFNEVLVERLQATCQAVEAELKAAKARGDDTAFCNPPQHHWRGSGALRGDVLSRLEAYRRENEGNCGMPGSGHGRFSSLNCIDDF------------------ERANALARGGXXXXXRHRXXHAGGGLA-EDGAGDLRQGLETAIEVTRGAVKSELLMFGDDEPAQRNAAAHPARSXXXXXXXXXXXXXXXXVAPTARGGGPXXXXXXXXXXXXXXXXXXKKRKRSGNG-RRCKHEGCLLHPHFGLTRPEYCSKHKLPGMFNVKGRRCIHPECTRTPVYGRSGDPH 656
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20124.5671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY9_ECTSI6.680e-3734.83EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20124contigH-elongata_contig20124:2935..5960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20124.5671.1mRNA_H-elongata_contig20124.5671.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20124 1090..6158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20124.5671.1 ID=prot_H-elongata_contig20124.5671.1|Name=mRNA_H-elongata_contig20124.5671.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=601bp
MLITDESSRGIPNEMGHLFIPRYSRDCGILDKSLCGTSTYRLKEDEIREV
HRPRNLQQMDHPPGDEDFEFLRNLLQQAVASPVVAPTPKTPSVSTFPAPP
AMVPPPRMRVPKHSPRFLPHPDVATIAKLELREPTAKSDGSTISGMAPRM
PGVGSAINTAVLYEVVAEEQLRAADEVAACIWLAGDMIRESLFAHVAEMW
LTMKTEIPIIAATGRSFSEEVAERLEETRLAVETELRVADEVLVARCEMD
IVEPDWHGSSILRGDVLTRLEAFQNDNRRETLARNPRFSLTECRQDLLER
LRGTREAVVAKINANHKAAATAAGGHGVYFSPAISDDEVSMGIDDVVYNV
VQQLKAIYIAAEEVRQPTGRVPTSDIRERLLERQRAADEAHLKGINHKPS
ESDSSAGDTSIGSSFVITRNERSSPARANSITKKKRRPGSGGRRCKNEDC
SLHPHFGFNRPEYCSRHKLKGMFNVKGRRCINPECVRTPVYGKKGDPHPT
YCAAHKLANMIDIKNPTCREPSCSRQPSFGSPQDRRATYCASHMLEGMLN
VRRMRASKSSPRGSTRERSPAEDANARAATPSASSYGEFGTDVCGRHGER
*
back to top