prot_H-elongata_contig20115.5669.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20115.5669.1
Unique Nameprot_H-elongata_contig20115.5669.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length766
Homology
BLAST of mRNA_H-elongata_contig20115.5669.1 vs. uniprot
Match: D8LBS9_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS9_ECTSI)

HSP 1 Score: 770 bits (1989), Expect = 5.800e-260
Identity = 528/815 (64.79%), Postives = 578/815 (70.92%), Query Frame = 0
Query:    1 TKLCHTLALAAAEAETGLARPNIDRAFIPVLLGLMSDPGNRRGPDVPLQACRALNYFLQIGAAGDVGVQHGMRTYALCITCAATAGTAEYQELGQEAVSGVDLLCRTSAEFMRELAETDIGGGGSKVLASFVRSIYRPSGGSRRNSVGISSIALSPGT--VVLAADDRRSSSNRSGAGSGAEAAI---AKALSLLPSLIDLHPRPKSA-------------------------TAGRGVQPSPNAVSXXXXXXXXXXXGDGAATASVDAFAGALGGGDELEAVLGALVAVLRRGSAPNRQAALAVLGSKVLPRLGSATTGGWKRLEELITDEELLVAAIEDRSSRGTACHLQALGLTYQLLASYPELMSLALEPGCPLLPTVLDALDDGG------DTPGLRAGGAAAAGVDGSGSGRRVSAPKAGGVGRDGATG---APETPISAPRTPRLVGMSSD-RRGGRVTGVADGESAGRSGLAVLRIVGLVSTAFLDGRLPKPSCLLFGGSMGG-RGPW-YNPGPMLIVQVQPERHSARAGTALVDGSGTSSXXXXXXXXXXXXXXXXXKQTTQGL-------AIVSVPAXXXXXXXXXXXKDNHERRAKLLADLGDGTALVSWANTGVEEVIASKRILLPSSSSLTSRARRSLARNSLFRTMMSLGGDPGSGDXXXXXXXXXXXXXIEDDPLASFSLNALXXXXXXXXXXXXXXXXXXXRAERSILNDFLGQFIQSGNTTTVRHVLAGGADPNRLVRPGQSALMAAASHPGGAAVALEMTRILLEAGADAGFSGPSGSALHSAASLGRGGVVSALIE 766
            TKLCHTLALAAAEAETGL+RPNIDRAFIPVLL LMSDPG+RRGPDVPLQACRALNYFLQIGAA DVGVQ GMRTYALCITC+ATAGTAEYQELGQEAVSGVDLLCRTSAEF+RELAETDIGGGG +VLASFVR +YR SGGSRR SV  S +  SPG     LA +DRR+  NR+G            AKALSLLP +++LHPRP  A                         +A +G + +P  V            GD       DA AG   G DEL+A+L AL+AVLR  SA NR+ ALA LGSKVLPRLG A  GG + L ELITD++LLVAAIEDRSSR  ACH +ALGLTYQLLAS PELMSLALEPGCPL P VLDAL DGG      D  G R G      +DGSGS                      AP TP SAPRTPRL GMS D RR  R  G AD E+AGRSGLAVLRIVGLV+ AF+DGRLPKPS LL G S GG RG   Y PGP ++VQVQ                    XXXXXXXXXXXXXXXXX +  QGL       A+VS  A           K+N ERRAKLLADLGDGT LVSWANTGVEE+IA++R+LL SS+SLTSRARRSLARNSLFRTMMSLGGDPGSGD             I+DDPLASFSL+ALXXXXXXXXXXXXXXXXX  RAE+SILNDFLGQFIQSGN TT+RHVLAGGADPNRL+RPGQSALMAAA+H GG A A+EMTRILL+AGADAGF GP GSALH+AA+ GRG VVSALI+
Sbjct:  121 TKLCHTLALAAAEAETGLSRPNIDRAFIPVLLELMSDPGSRRGPDVPLQACRALNYFLQIGAASDVGVQRGMRTYALCITCSATAGTAEYQELGQEAVSGVDLLCRTSAEFLRELAETDIGGGGGRVLASFVRGVYRSSGGSRRGSVSASPVGHSPGGSGAGLAVEDRRN--NRAGGAXXXXXXXXXXAKALSLLPLILELHPRPAGAPXXXXXXXXXXXXXXXXXXXXASVVSALQGKETAPTGV-----------VGD---DEHADADAG--DGDDELQAILEALLAVLRGASASNREVALATLGSKVLPRLGGAAAGGREWLGELITDKDLLVAAIEDRSSRSAACHQRALGLTYQLLASSPELMSLALEPGCPLFPAVLDALGDGGGGGLGGDASGSRPG------MDGSGSSXXXXXXXXXXXXXXXXXXXXXAPGTPRSAPRTPRLAGMSGDGRRMSRTGGAADSEAAGRSGLAVLRIVGLVAAAFVDGRLPKPSSLLLGSSGGGGRGTTGYTPGPAIMVQVQXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXRRDQGLGGSAHSSALVSSGASARRARAGSGAKENQERRAKLLADLGDGTVLVSWANTGVEEIIAARRVLLSSSNSLTSRARRSLARNSLFRTMMSLGGDPGSGDSDSNGDGGG----IDDDPLASFSLSALXXXXXXXXXXXXXXXXXA-RAEKSILNDFLGQFIQSGNATTLRHVLAGGADPNRLIRPGQSALMAAAAHEGGTATAIEMTRILLDAGADAGFVGPEGSALHAAAATGRGEVVSALID 897          
BLAST of mRNA_H-elongata_contig20115.5669.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 607 bits (1566), Expect = 1.100e-188
Identity = 443/746 (59.38%), Postives = 492/746 (65.95%), Query Frame = 0
Query:   72 MRTYALCITCAATAGTAEYQELGQEAVSGVDLLCRTSAEFMRELAETDIGGGGSKVLASFVRSIYRPSGGSRRNSVGISSIALSPGT--VVLAADDRRSSSNRSG-AGSGAEAAIAKALSLLPSLIDLHPRPKSATAGRGVQPSPNAVSXXXXXXXXXXX---GDGAATASV-------DAFAGALGGGDELEAVLGALVAVLRRGSAPNRQAALAVLGSKVLPRLGSATTGGWKRLEELITDEELLVAAIEDRSSRGTACHLQALGLTYQLLASYPELMSLALEPGCPLLPTVLDALDDGGDTPGLRAGGAAAAGVDGSGSGRRVSAPKAGGVGRDGATGAPETPISAPRTPR-----------------------------------LVGMSSD-RRGGRVTGVADGESAGRSGLAVLRIVGLVSTAFLDGRLPKPSCLLFGGSMGG-RGPW-YNPGPMLIVQVQPERHSARAGTALVDGSGTSSXXXXXXXXXXXXXXXXXKQTTQGLAIVSVPAXXXXXXXXXXXKDNHERRAKLLADLGDGTALVSWANTGVEEVIASKRILLPSSSSLTSRARRSLARNSLFRTMMSLGGDPGSGDXXXXXXXXXXXXXIEDDPLASFSLNALXXXXXXXXXXXXXXXXXXXRAERSILNDFLGQFIQSGNTTTVRHVLAGGADPNRLVRPGQSALMAAASHPGGAAVALEMTRILLEAGADAGFSGPSGSALHSAASLGRGGVVSALIE 766
            MRTYALCITC+ATAGTAEYQELGQEAVSGVDLLCRTSAEF+RELAETDIGGGG +VLASFVR +YR SGG    S+  S +  SPG     LAA+DRR+  NR+G AG+GAE A+AKALSLLP +++LHPRP  A              XXXXXXX       G   AT  V       DA AG   G DEL+A+L AL+AVLR  SA NR+ ALA LGSKVLPRLG A  GG + L ELITD++LLVAAIEDRS RG ACH +ALGLTYQLLAS PELMSL LEPGCPL P VLDAL D G                             GG+G D     P                                              L GMS D RR  R  G AD E+AGRSGLAVLRIVGLV+ AF+DGRLPKPS LL G S GG RG   Y PGP ++VQV PE    R G  +   SG    XXXXXXXXXX       +     A+VS  A           K+N ERRAKLLADLGDGT LVSWANTG+   IA++R+LL SS+SLTSRARRSLARNSLFRTMMSLGGDPGSGD             I+DDPL+SFSL+A XXXXXXXXXXXXXXXXX  RAERSIL+DFLGQFIQSGN TT+RHVLAGGADPNRL+RPGQSALMAAA+H GG A A+EMTRILL+AGADAGF GP GSALH+AA+ GRG VVSALI+
Sbjct:    1 MRTYALCITCSATAGTAEYQELGQEAVSGVDLLCRTSAEFLRELAETDIGGGGGRVLASFVRGVYRSSGG----SISASPLGHSPGGSGAGLAAEDRRN--NRAGGAGAGAEEAVAKALSLLPLILELHPRPAGAPXXXXXXXXXXXXXXXXXXXXSVVSALQGKETATTGVIGDDEHADADAG--DGDDELQAMLDALLAVLRGASASNREVALATLGSKVLPRLGGAAAGGREWLGELITDKDLLVAAIEDRSLRGAACHQRALGLTYQLLASSPELMSLVLEPGCPLFPAVLDALGDSGG----------------------------GGLGXDAXXSRPXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGMSGDGRRMSRTGGAADSEAAGRSGLAVLRIVGLVAAAFVDGRLPKPSSLLLGSSGGGGRGTTGYTPGPAIMVQVLPENTPTRTGGGVAAASG--DLXXXXXXXXXXRREQGSGRQAHSSALVSSGASARRTRAGSGAKENQERRAKLLADLGDGTVLVSWANTGI---IAARRVLLSSSNSLTSRARRSLARNSLFRTMMSLGGDPGSGDSDSNGDGAG----IDDDPLSSFSLSAXXXXXXXXXXXXXXXXXXA-RAERSILSDFLGQFIQSGNATTLRHVLAGGADPNRLIRPGQSALMAAAAHEGGTATAIEMTRILLDAGADAGFVGPEGSALHAAAATGRGEVVSALID 700          
BLAST of mRNA_H-elongata_contig20115.5669.1 vs. uniprot
Match: A0A836CMD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD4_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.250e-60
Identity = 289/876 (32.99%), Postives = 362/876 (41.32%), Query Frame = 0
Query:    1 TKLCHTLALAAAEAETGLARPNIDRAFIPVLLGLM----SDPGNRRGPDVPLQACRALNYFLQIGA--AGDVGVQHGMRTYALCITCAATAGTAEYQELGQEAVSGVDLLCRTSAEFMRELAETDIGGGGSKVLASFVRSIYRPSGGSRRNSVGISSIALSPGTVVLAADDRRSSSNRSGAGSGA------EAAIAKALSLLPSLIDL--HPRPKSATAGRGVQPSPNAVSXXXXXXXXXXXGDGAATASVDAFAGALGGGDELEAVLGALVAVLRRGSAPNRQAALAVLGSKVLPRLGSATT------------GGWKRLEELITDEELLVAAIEDRSSRGTACHLQALGLTYQLLASYPELMSLALEPGCPLLPTVLDALDDGGDT-----PGLRAGG------AAAAGVDGSGSGRRVSAPKAGGVGRDGATGAPETPISAPRTPRLVGMSSDRRGGRVTGVADGESAGRSGLAVLRIVGLVSTAFLDGRLPKPSCLLFGGSMGGRGPWYNPGPMLIVQVQPERHSARAGTALVDGSGTSSXXXXXXXXXXXXXXXXXKQTTQGLAIVSVPAXXXXXXXXXXXKDNHERRAKLLADLGDGTALVSWANT-------------------------------------GVEEVIASKRILL-PSSSSLTSRARRSLARNSLFRTMMSLGGDPGSGDXXXXXXXXXXXXXIEDDPLASFSLNALXXXXXXXXXXXXXXXXXXXRAERSILNDFLGQFIQSGNTTTVRHVLAGGADPN--------------------------------------------RLVRPGQSALMAAASHPGGAAVALEMTRILLEAGADAGFSGPSGSALHSAASLGR 757
            T+LC  LA+  A AE+G+ RP +D  +I VL+G++    +     R  + PL ACRALNYFL +GA  A +VG + G+     C++ A T  T   QEL QEAV GVDLL R+SA+ +R L E   GG G +++ SF+ S YR  G                   V+  D R       G+ +GA      EAA+A+ L LL  L++   H R  SAT         NAVS                              DE+EAV+ AL A LR G   N+ AAL +L ++V PRL  + +            G    L  L+ DE LLVAAI  RS+   ACHLQAL L  QLL+  PEL SLAL P C LLP +L  L+DGGD      P  R         AAA GV     GR +S    GGV       +P TP SA        M S + GG     A  E+   S LA+LRIVGL+S     GRLP P   L G   GGRG                                                                  XXXXXXXXXX    ERRA LLADLGDGT LV +A                                        +EE+I + R++L P+S+S  +RARRSL R      ++S  G PG   XXXXXXXX       DD L    L                         +++   FL QF++ GN + VR VLA GAD N                                            R  R               A VALE+  +LLE GAD   S P+G+ALH+AA+ G 
Sbjct:   95 TELCQELAIGVAHAESGMGRPTVDAGYIRVLVGIVGARDAAAARSRSQEAPLLACRALNYFLTLGASYAAEVGDRGGLGALLHCLSLACTGDTTSLQELAQEAVKGVDLLVRSSADNLRRLLE---GGQGLRIVCSFIASAYRKRG------------------RVVRMDSRDGPGVDDGSAAGAPPSSATEAAVARGLELLRLLLETSWHRRGASATL--------NAVSA-----------------------------DEVEAVMDALCAALRNGRGDNKDAALQLLATRVAPRLSPSPSHTRPPPGQEGDGGAAGALGVLLLDEGLLVAAIRQRSAGDLACHLQALSLVTQLLSGSPELCSLALAPSCSLLPVLLSMLEDGGDAQHEPPPSARDRSISIGMPAAAVGV-----GRSISIGTPGGV-------SPTTPGSARSGASXARMGSAKGGGLSPATA--ETLALSNLAMLRIVGLLSHVLTTGRLP-PHKSLAGPVAGGRGXXXXXXXXXXXXXX----------------------------------------------------XXXXXXXXXXXARSERRATLLADLGDGTCLVRYATAPPATRSSSSSGTPRTXXXXXXXXXXXXXXXXXAPPSHALEEIIDAHRVILGPASASFAARARRSLTR-----ALLSDFGPPGXXXXXXXXXXXDGEGDGGDDALGELLLGG---------------RGGLLAGAQAMQQRFLQQFVEGGNVSLVRRVLADGADANGGEGGGAAGAPLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGRDGRTXXXXXXXXXXXXXXADVALELVNLLLENGADPMLSLPTGTALHAAAAAGH 825          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20115.5669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBS9_ECTSI5.800e-26064.79Ankyrin repeat-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KW24_9PHAE1.100e-18859.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMD4_9STRA1.250e-6032.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 675..766
e-value: 9.6E-11
score: 43.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 679..766
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..766
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 683..766
score: 10.365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20115contigH-elongata_contig20115:279..5768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20115.5669.1mRNA_H-elongata_contig20115.5669.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20115 279..5768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20115.5669.1 ID=prot_H-elongata_contig20115.5669.1|Name=mRNA_H-elongata_contig20115.5669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=766bp
TKLCHTLALAAAEAETGLARPNIDRAFIPVLLGLMSDPGNRRGPDVPLQA
CRALNYFLQIGAAGDVGVQHGMRTYALCITCAATAGTAEYQELGQEAVSG
VDLLCRTSAEFMRELAETDIGGGGSKVLASFVRSIYRPSGGSRRNSVGIS
SIALSPGTVVLAADDRRSSSNRSGAGSGAEAAIAKALSLLPSLIDLHPRP
KSATAGRGVQPSPNAVSADKDKGAASAAGDGAATASVDAFAGALGGGDEL
EAVLGALVAVLRRGSAPNRQAALAVLGSKVLPRLGSATTGGWKRLEELIT
DEELLVAAIEDRSSRGTACHLQALGLTYQLLASYPELMSLALEPGCPLLP
TVLDALDDGGDTPGLRAGGAAAAGVDGSGSGRRVSAPKAGGVGRDGATGA
PETPISAPRTPRLVGMSSDRRGGRVTGVADGESAGRSGLAVLRIVGLVST
AFLDGRLPKPSCLLFGGSMGGRGPWYNPGPMLIVQVQPERHSARAGTALV
DGSGTSSGGGGGNKGGTATGAAGTKQTTQGLAIVSVPARRGGGGGGGGAK
DNHERRAKLLADLGDGTALVSWANTGVEEVIASKRILLPSSSSLTSRARR
SLARNSLFRTMMSLGGDPGSGDSDSNGDGGGIGLGIEDDPLASFSLNALS
ALAALGGRVGGGGSGGAARAERSILNDFLGQFIQSGNTTTVRHVLAGGAD
PNRLVRPGQSALMAAASHPGGAAVALEMTRILLEAGADAGFSGPSGSALH
SAASLGRGGVVSALIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom