prot_H-elongata_contig200758.5654.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig200758.5654.1
Unique Nameprot_H-elongata_contig200758.5654.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
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BLAST of mRNA_H-elongata_contig200758.5654.1 vs. uniprot
Match: D7FR32_ECTSI (GDP-fucose protein O-fucosyltransferase, family GT65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR32_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.280e-36
Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 0 
Query:    1 KAVVYNEEPWQSKVIHFSGDCHDSRWEGSGNRRPLIHFYAFMMHVDPLVDARVKRFARDRLRYRDGIFCKASQVL 75
            +AV Y+E+ W SKVIHFSGDCHDSR EGS NRRPLIHFYAFM+H D LVD+RVKRFARDRLRYRD IFCKASQ++
Sbjct:  137 QAVTYDEDAWNSKVIHFSGDCHDSRAEGSKNRRPLIHFYAFMLHADTLVDSRVKRFARDRLRYRDRIFCKASQIV 211
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BLAST of mRNA_H-elongata_contig200758.5654.1 vs. uniprot
Match: A0A6H5L164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L164_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 8.940e-35
Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 0 
Query:    1 KAVVYNEEPWQSKVIHFSGDCHDSRWEGSGNRRPLIHFYAFMMHVDPLVDARVKRFARDRLRYRDGIFCKASQVL 75
            +A+ Y+E+ W SKVIHFSGDCHD+R EGS NRRPLIHFYAFM+H D LVD+RVKRFARDRLRYRD IFCKASQ++
Sbjct:  517 QAITYDEDAWNSKVIHFSGDCHDNRAEGSKNRRPLIHFYAFMLHADKLVDSRVKRFARDRLRYRDRIFCKASQIV 591
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig200758.5654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR32_ECTSI1.280e-3680.00GDP-fucose protein O-fucosyltransferase, family GT... [more]
A0A6H5L164_9PHAE8.940e-3577.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig200758contigH-elongata_contig200758:466..690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig200758.5654.1mRNA_H-elongata_contig200758.5654.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig200758 466..690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig200758.5654.1 ID=prot_H-elongata_contig200758.5654.1|Name=mRNA_H-elongata_contig200758.5654.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
KAVVYNEEPWQSKVIHFSGDCHDSRWEGSGNRRPLIHFYAFMMHVDPLVD
ARVKRFARDRLRYRDGIFCKASQVL
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